Tupaia chinensis (Chinese tree shrew): 102473057
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Entry
102473057 CDS
T02978
Symbol
TOPORS
Name
(RefSeq) TOP1 binding arginine/serine rich protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102473057 (TOPORS)
03036 Chromosome and associated proteins [BR:
tup03036
]
102473057 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tup03037
]
102473057 (TOPORS)
Enzymes [BR:
tup01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102473057 (TOPORS)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102473057 (TOPORS)
UBL E3 ligases
102473057 (TOPORS)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102473057 (TOPORS)
Cilium and associated proteins [BR:
tup03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102473057 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102473057
NCBI-ProteinID:
XP_006172467
LinkDB
All DBs
Position
Un
AA seq
1048 aa
AA seq
DB search
MGSKPPPGSPLSREEGEAPPSDPAPEGRRRSRRVRLRGSCRHRPSFLGRRELITSASAGP
APASPEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDGPRFR
YRTTMTRDRNASVYSPSSTVNRRTTTPPDSGVLFEGLGISTRSRDVEIPHIMRQIAIRRP
TSADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVATVSQAPWDDE
TPGPSYSSSEQVHVAMSSLLNTSDSSDEELVTGGATSQIQGVQTNEDLNNDSDDSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKIETAKTQDQEQSYSSGDSDVSRCSSPHSVL
GKDEQSNKGHCNSGTRIKSKKEEKRSTSLSSPRDLSSSTRGDRVYSPYNHRHKKRGRSRS
SDSRSQSRSGHDQKNHRKHHGKRRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQT
LSLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKERDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSNRSRT
ASTTGPDRMRSEKPGGKRKYKTRHLEGTNEVAQPSREFTSKVKESHYQKSSSKLDGNHKN
ESDSFSDSRSSDRETKHKRRKRRTRSLSVEIVYEGKATDTIKHHKKKKKKHKKKHKKHHG
DNASRSPVVITIDSESDKDSEVKEDRECDNSGPQVSLQNEFLAPSLEPFETKDVVTIEDE
FGVLXXXECDIATITNNLNNTNKTVENIPPQSASVEQTLDVREESIFASDLENQPGNVVS
IQTEPSRQLPSPRTSLMSESLGRDCDRS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaagccgccgccagggtctccgctgtctcgcgaggagggtgaagcgcccccg
tctgatccggcgcctgaggggaggcggagaagtcgtcgagtacgtcttcgcggatcctgc
cgtcaccgaccgagctttttgggccgtcgagagcttatcacaagcgcctcagccgggcct
gcgccggcgtctcctgagataatggcatcagctgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcagcagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggatagatttgacaatgtatcttacttagatcgctgctta
cataaattctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattcaattttccattctgtgagagcagaagatgacttcaaggag
tatgtcctaaggccttcatataatggttcttttgctacccctgatggtccgcgatttcgc
taccgaacaactatgacaagggacagaaatgcttctgtttattcacctagtagtaccgtg
aatcgaagaacaactactccaccagatagtggagtactatttgaagggttaggtatttca
acaagatctagagatgttgaaattcctcatattatgagacaaattgcaataaggaggcca
acatctgcagatgaaagatctttgaggaaaattcaagaacaagatattattaattttaga
agaactctctatcgtgctggtgctcgagttaggaatattgaagatgggggccgctacagg
gatatttctgctgaattttttcgtagaaatccagcttgcttacacagattagtcccctgg
ttaaaacgggaacttacagttctttttggagctcatggatctttagtgaatatagtccag
cacatcattatgagtaatgttactcgctatgacttggagagtcaggcatttgtatctgat
ttaagaccatttttactcaatcgaactgaacattttatacatgaatttattagttttgct
cgctctccttttaatatggcagcctttgaccagcatgccaattatgattgtcctgctcct
tcatatgaagaaggaagtcattctgattcttcagtcataacaatatcaccagatgaggct
gagactcaagagttggatattaatgtagctactgttagtcaagcaccatgggatgatgaa
actccaggaccatcttactcaagctcagagcaggtacatgttgccatgtcttccctttta
aatacttctgacagttcagatgaagaacttgttacaggaggagccacatctcagatacaa
ggggtgcaaaccaatgaagacctaaataatgacagtgatgattcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggctcttatgagaaaatagagacagcgaagacacaagatcaagag
cagtcttacagttctggtgatagtgatgttagtagatgttcgtctccacactctgtgctt
gggaaagatgagcaaagtaataaaggtcattgcaactctggtacaagaatcaaatcaaag
aaggaagagaaacgatctacatcattgtcatctcctagagacctgagttcatctacaaga
ggagacagagtatattctccatataaccatagacacaaaaagaggggaagatcaagaagt
tcagattcacgttcccagagcagaagtggacatgatcagaagaatcatagaaagcatcat
gggaaaagaagaatgaaaagcaaacgatccagaagcagagaaagtagcagacctagagga
agaagagacaaaaaaagatcaagaactagagatagcagttggtcaagaagaagccaaact
ctgtctctcagtagtgaaagcacaagcagatcaaggtctcgtagcagtgatcatggaaaa
agaagatcacggagcagaaatagagatcgttattatttacgaaataattatggaagcaga
tataagtgggaatatacttattatagtagaaacaaggaaagggatggctatgaatcatct
tataggaggaggactctgtccagagcgcattattccagacaatcttcaagtccagaattt
agaattcagtccttttctgaaagaacaaatgctaggaagaaaaataatcacagtgaaagg
aaatactactactatgaaaggcacagatcaaggagcctatctagtaatagatcaaggact
gcttctactactgggcctgaccgaatgagaagcgaaaaacctggagggaaaagaaaatac
aaaacacggcatttggagggtactaatgaagtggctcaaccgtctcgtgaatttacttcc
aaagtaaaggaaagtcattaccaaaaatcttcgtcaaaattggatggtaaccacaaaaat
gagagtgacagcttttcagacagccgatcatcagacagagagacaaaacacaagagaaga
aaaaggaggacccgaagcctaagtgtagagatagtttatgaagggaaagctacggataca
attaaacatcataaaaagaaaaagaagaaacacaaaaagaagcataagaaacaccatgga
gataatgcttcacgttccccagttgtaattaccattgacagtgagagtgataaagattct
gaagtaaaggaagatagagaatgtgataatagtggccctcaagtctcactgcaaaatgag
tttttggctccttccttggaaccatttgaaactaaagatgtagttacaatagaagatgaa
tttggtgtactggnnnnnnnngagtgtgatattgccacaattactaacaacttaaataat
accaacaaaactgtagaaaatattccaccccagtcagcttcagttgaacagactcttgat
gtaagagaagagagcatctttgcctctgatttggagaaccagcctggtaatgttgtgtct
attcagactgagccatcaaggcaattgccatctccacggacatcattaatgtcagagtct
cttggtagagactgtgataggagttaa
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