Tupaia chinensis (Chinese tree shrew): 102473246
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Entry
102473246 CDS
T02978
Symbol
COLGALT1
Name
(RefSeq) collagen beta(1-O)galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup00310
Lysine degradation
tup00514
Other types of O-glycan biosynthesis
tup01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102473246 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102473246 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tup01003
]
102473246 (COLGALT1)
Enzymes [BR:
tup01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102473246 (COLGALT1)
Glycosyltransferases [BR:
tup01003
]
O-Glycan biosynthesis
O-linked Gal type
102473246 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
102473246
NCBI-ProteinID:
XP_014442810
LinkDB
All DBs
Position
Un
AA seq
623 aa
AA seq
DB search
MAAAPRECGRRGRPLPAVLLLLLLAPPPPGGPPGVGGYFSEERWSPESPLQAPRVVIALL
ARNAAHALPATLGALERLRHPRERTALWVATDHNADNTSAVLREWLVAVKNFYHSVEWRP
AEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNFILNPDTLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRQGCFAVPMVHSTFL
IDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNREVYGFLPVPLRAHS
SLLDEAESFMHVQLEVMVKHPPVEPSRFISLPTKTPDKMGFDEVFMINLKRRLDRRERML
RALHDQEIEFHLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRGLQKSLVFEDDLRFEIFFKRRLINLMKDVEREDLDWDLIYVGRKRMQVEHPEK
AVPRVRNLVEADYSYWTLAYVISLQGARKLLAAKPLTKMLPVDEFLPVMFDKHPVSKYKV
HFSPRNLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQA
LSREAKNSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccacgcgagtgcgggcggcgcgggcggccgctcccagctgtgctgctg
ttgctgctgctggcgccaccgcctccggggggcccgcccggcgtcggcggctatttctcc
gaggaacgctggagcccggagtcgccgctgcaggcgccgcgcgtggtgatcgcgctgctg
gcgcgaaacgcggcccacgcgctgcccgccacgctgggcgcgctcgagcggctgcgccac
ccgcgggagcgcacggcactgtgggtggcaacggatcacaacgcggacaacacttcggcc
gtgctgcgggagtggctggtggccgtgaagaatttctaccattctgtggagtggagaccc
gcagaggagcccaggtcctacccagacgaggaaggccccaaacactggtctgactcgcgc
tatgaacacgtcatgaagctacgccaagcggccctgaagtcagcccgggacatgtgggct
gattacatcctgttcgtggacgcggacaacttcatcctcaaccccgacaccctgagcctg
ctcatcgccgagaacaagacggttgtcgcccccatgctggactcccgggctgcgtactcc
aacttctggtgtggaatgacttcccagggctattacaagcgcacgcccgcctacatcccc
atccgcaagcgcgaccgccagggctgcttcgcggttcccatggtgcattcgaccttcctg
atcgacctgcgcaaggcggcgtccaggaacctggccttctacccgccccaccccgactac
acctggtccttcgacgacatcatcgtctttgccttttcctgcaagcaggcagaggtgcag
atgtacgtgtgcaacagggaggtgtacggcttcctgccggtgccgctgcgggcgcacagc
agcctcctggacgaggcggagagcttcatgcacgtgcagctggaggtcatggtgaagcac
ccacctgtcgagccctcccggttcatctccctgcccaccaagaccccggacaagatgggc
tttgatgaggtcttcatgatcaacctgaagcggcggctggaccggcgggaacgcatgctg
cgagcgctgcatgatcaagaaatcgagttccacctggtggaggccgtggacggcaaagcc
atgaacaccagccaggtggaggccctgggcatccagatgctgcctggctaccgggacccc
taccatgggcggccgctcaccaagggcgaactgggctgcttcctcagccactacaacatc
tggaaggaggtggtggacagagggctacagaagtcgcttgtgtttgaggatgacctgcga
ttcgagatcttcttcaagaggcgcctgataaacctcatgaaggatgtggagcgggaggac
ctggactgggaccttatctatgtgggccgaaagcggatgcaggtggagcaccctgagaag
gccgtgccccgcgtgaggaacctggtggaagccgactactcctactggacactagcctat
gtgatctccctgcaaggtgcccgcaagctgttggcagccaagccgctcaccaagatgttg
cccgtcgacgagttcctgcctgtgatgttcgacaagcacccagtgtccaagtacaaggtc
cacttctccccccgcaacctgcgtgccttttctgtggagcccttgctggtttaccccacg
cactacacaggggatgatggctacgtgagcgacacagaaacctcagtcgtatggaacaat
gaacacgtcaaaaccgactgggaccgtgccaagtcccagaagatgcgggagcagcaggcc
ctgagccgggaggccaagaactccgatgtactccagtctccgttggacagcgctgcccgg
gatgaactctga
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