Tupaia chinensis (Chinese tree shrew): 102473520
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Entry
102473520 CDS
T02978
Symbol
COL6A1
Name
(RefSeq) collagen type VI alpha 1 chain
KO
K06238
collagen type VI alpha
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04151
PI3K-Akt signaling pathway
tup04510
Focal adhesion
tup04512
ECM-receptor interaction
tup04820
Cytoskeleton in muscle cells
tup04974
Protein digestion and absorption
tup05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102473520 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102473520 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102473520 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102473520 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102473520 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102473520 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tup04147
]
102473520 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
tup00536
]
102473520 (COL6A1)
Exosome [BR:
tup04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102473520 (COL6A1)
Glycosaminoglycan binding proteins [BR:
tup00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102473520 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
102473520 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
102473520
NCBI-ProteinID:
XP_006163868
LinkDB
All DBs
Position
Un
AA seq
1027 aa
AA seq
DB search
MRLAHTLLPLLLQACWAWAQDDPAASRVMAFQDCPVDLFFVLDTSESVALRLQPYGALVD
KVKEFTKRFINNLRDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDDLKSSIDAV
KYFGKGTYTDCAIKKGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEQRLSIIASDHTYRRNFTAADWGQSLDAEETISQTIDTIIDMIK
NNVEQVCCSFECQPARGPPGPPGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPMGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGEAGYPGLPGCKGSPGADGIQGPPGP
KGDPGAFGLKGEKGEPGANGEAGRPGNTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA
PGERGGSGEQGQRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPIGPKGYRGD
EGPPGIEGPRGSPGPLGPPGDPGLMGERGEDGPPGNGTDGFPGFPGYPGNRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDLSPRGAKGAKGYRGPEGPQGPPGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRNPNIRNMQELKEAIKKLQWMAGGTFTGEALQYTRDRLLPPTQN
NRIALVITDGRSDTQRDTTPLTVLCGPDVQVVSVGIKDVFGFAAHSDQIHEISCQGPSFQ
GRPGISLVKDNFAELLDDGFLKNITAQICIDKKCPDYTCPITFSSPTDITLLLDGSASVG
SHNFDITKRFAKRLAERFLTASRTDPSHDVQVAVVEYSGTGQQRPARGALQFLQNYTVLA
STIDGLDFFNDATDVIDALSYVTRFYRGASPGAAKKKVLLFSDGNSQGATAAAIEKAVQE
AQRAGIEVFMVVVGTQVNEPHIRVLVTGKTAEYDVAYGESHLFRVPSYQALLQGVLYQTV
SRKVALG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggttagcccacacgctgctgcccctgctgctgcaggcctgctgggcctgggcacag
gacgaccctgcggcctcaagggtcatggcctttcaagactgccccgtggacctgttcttt
gtgctggacacctcggagagcgtagccctgaggctgcagccctatggggccctagtggac
aaggtcaaggaattcaccaagcgcttcatcaacaacctgagggacaggtactaccgctgt
gaccgcaacctggtgtggaacgcgggcgccctgcactacagcgatgaggtggagatcatc
cgcggcctcacgcgcatgcccagcggccgcgatgacctcaagagcagcatagacgcagtc
aagtactttggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctg
ctcatcgggggctcccacctgaaggagaacaagtacctgattgtggtcaccgacgggcac
cccctggagggctacaaggagccatgtgggggcctggaggacgcagtgaacgaggccaag
cacctgggcatcaaggtcttctctgtggctatcacgccagaccacctggagcagcgtctg
agcatcatcgcctcggaccacacttaccgccgcaacttcacagcagccgactgggggcag
agcctcgacgcggaggagaccatcagccagaccatcgacaccatcattgacatgatcaaa
aataatgtggaacaagtgtgctgttccttcgagtgccagcctgccagaggacctccaggg
cccccgggtgaccctggctatgagggagaacgaggaaagccggggctcccaggagagaag
ggggaagccggagaccctggaagacctggggaccttgggccaatggggtaccaggggatg
aagggagaaaaagggagccgcggagagaagggctccagaggacccaagggttacaagggc
gagaagggcaagcgtggcatcgacggtgtagacggcatgaagggagaagcagggtaccca
ggcctgcctggctgcaagggctcacctggagctgatggcattcaaggaccccctggccct
aaaggagatcctggcgccttcggactgaaaggagagaagggagaacctggagccaatgga
gaggctgggaggccagggaacacaggcccccctggagatgagggtgaacctggagagcct
ggacccccaggagagaagggagaagctggcgatgaggggaacgcagggccggacggtgcc
cccggagaaaggggcgggtctggagagcaaggacagcggggaacccctggcgtgcggggc
ccaagaggagacccgggtgaagctggaccacagggtgaccagggaagagaaggccccgtt
ggcattcctggagacccgggtgaggctggccccattggacctaaaggataccgaggtgat
gaaggccccccaggcatcgagggccccagaggatcccctggaccccttgggccccctgga
gacccagggctgatgggcgaaaggggtgaagatggcccccctggaaatggtaccgacggc
ttccccggcttccctggataccccggcaacaggggccctcctggcataaacggcacaaaa
ggctaccctggcctcaagggggatgaaggtgaagctggggaccctggagaggacaacaat
gacctctcaccccgcggagcaaagggagccaagggttaccgaggccctgaaggcccccag
ggacccccaggacacacgggacctccgggaccagatgaatgcgagatcttggatatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgcggccccatcgacatcctgttcgtgctg
gacagctctgagagcatcgggctgcagaactttgagatcgctaaggacttcatcatcaag
gtcatcgaccgtctgagcagggatgagctggtcaagtttgagccagggcagtcgcatgca
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgaggaaccccaac
atcaggaacatgcaggagctcaaggaggccatcaagaagctgcagtggatggctggggga
acgttcacgggggaggccctgcagtacacccgggaccggttgctgccacctactcagaac
aaccgcattgccctagtcatcactgatgggcgctcagacacccagcgggacacaacccca
ctcaccgtgctctgcggccctgacgtccaggtggtctctgtgggcatcaaggatgtgttt
gggtttgctgcacactccgaccagatccacgaaatctcctgccaaggcccatccttccaa
ggccggccaggcatttcgctggtcaaggacaacttcgcagagctgctggacgatggcttc
ctgaagaatattaccgcacagatctgcatagacaagaagtgtcctgattacacctgtcca
attacattctcctctccaactgacatcaccctcctccttgatggctcagccagtgtgggc
agccacaactttgacatcaccaagcgctttgccaagcgcctagctgagcgcttcctcaca
gcgagcaggacggacccatcccacgatgtacaggtggccgtggtggaatacagcggcact
ggccagcagaggccggcgcggggagcactgcagttcctgcagaactacacagtgctggcc
agcaccattgatggcttggacttcttcaatgatgccaccgatgtcattgatgccctgagc
tatgtgacccgcttctaccgtggggcctcgccaggtgcagccaagaagaaagtactgctc
ttctccgacggcaactcacagggtgccacggcggcagccattgagaaagcagtgcaggag
gcacagcgcgcaggcatcgaggtcttcatggtggtggtgggcacccaggtgaacgagccc
cacatccgtgtcctggtcaccggcaagacagctgagtacgatgtggcctatggtgagagc
cacctgttccgagtgcccagctaccaggccctgcttcagggcgtgctgtaccagaccgtg
tccagaaaagtggcactgggctag
DBGET
integrated database retrieval system
