Tupaia chinensis (Chinese tree shrew): 102473697
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Entry
102473697 CDS
T02978
Symbol
TAF1C
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tup03021
]
102473697 (TAF1C)
Transcription machinery [BR:
tup03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102473697 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
102473697
NCBI-ProteinID:
XP_006152628
LinkDB
All DBs
Position
Un
AA seq
883 aa
AA seq
DB search
MDFPSPLRPTLFVTGPLGLSDGPDLSFMCSWRDALTLPEPRSHSAKKGARHPAQDLLWEP
ATPGPLPLLPPGPDPWDPGVTAQDLLFRGGYRYRRRPRVVLDTSEQLSQFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKKTVVSVKSLLQDLGGHQPWGCPWAYLSHRQRRFSILGDP
VLGQSVVSLLGELLQQELAARWEQLLLDEAFTGGALAWVPGRTPQSGQLIYPAGGALDRL
HLQEVVLTPAGTPEVLGVPGCIQLRGPVRQVVTGTVQGESLLAVRSDYHCAVWKVGKQGQ
PAPLQVLQVEKGATGISLSPHLPGELAVCSRSGAICLWTPQDGLQHVHKDPETLVFRDPS
PWRWADFTAHPRVLTVADRTGVKMIDTQGQPGCGLLLFRGGAEASCQKGERVLLAQYLGQ
SGPASLPPTLHLVCTQFSLYLVDERLPLVPMLKWDHGLPSPPLLARLLPPPLSGGPWPLL
LGGQGGQLQLLHIAGEVASTPRLAGPPQSLPSRTDSLSAFPVLEPKSQQRLQERLSAPTI
GLASTIPPSASTPVLSIFHLSAAGDIFYQHFHLRADPSLLHRDPGSDCHAPTMTAPSLDK
TPTPPTASWTPQATALCSQWLTALMEVPSAPRAWAAPTFSHRHLLGSLEPHGVQGTVPEA
LRAAMAAGRLLRQRDLGSLPRAEPPPAPESGPEDELTERLGEAWEGRGAAWWARQLGRAS
ASGKQSKRPKRRTQLSSTFSSLSSRPELSDAISPPPSPDRAPEARPQPPATPPSQELTQE
PWAEGVPSERQQTLRDYMANLPLRRDTTGHVATPPSQASSIPATPSQQQAEDHMAKLPLQ
GDTLGHAATPPSQASSARATHSQQRAPVLSGSQPRRKKPRMGF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagccccctccgccccacgctgtttgtgaccggccccctgggtctgagt
gacggccctgacctgtccttcatgtgcagctggagagacgccctgaccctgcccgagccg
cggtcccacagcgccaagaagggggctcggcacccggcccaggacctgctgtgggagcca
gccacccctgggccgctccccctgctgcctcctggccctgacccctgggaccctggggtg
accgcccaggacctgctcttccgtggaggttaccggtaccggaggcggccccgagtcgtg
ctggatacttctgagcagctcagccagttcctgtgggaccatggggacatcgcctttgca
cccttggggaagctgatgctggagaacttcaaactggagggagcacggagtcgctctaag
aagaagacagtggtcagtgtgaagagcctgctgcaggacctcggtggacaccagccctgg
gggtgtccctgggcttacctcagccaccggcagcgccggttctccatcctcggggaccct
gtcctgggccagtcggtggtgagcctcctcggggagctgctgcagcaggagctggccgca
cggtgggagcagctgctcctggacgaggccttcaccgggggcgcattagcctgggtgcct
ggaaggacgccccagagcgggcagctcatctaccctgctggaggcgccctggacaggctg
catttgcaggaggtcgttctgactccagctggcacccctgaagtccttggggtccctgga
tgcatccagctccggggacctgtccggcaggtggtgaccggcaccgtccagggagaatct
ctgctggccgtccgctccgactaccactgtgccgtgtggaaggtcggtaagcaggggcag
ccggcccctctgcaggtgctgcaggtggagaagggggccaccgggatcagcctcagccct
cacctgcccggggagctggccgtctgtagccgttcgggagccatctgtctgtggaccccc
caggatgggctgcagcacgtccacaaggaccccgagacgcttgtgttccgggacccctcc
ccctggcgttgggcagacttcacggcccacccccgggtgctgacggtggccgaccgcact
ggggtgaagatgatcgacacccagggccagccgggctgtgggctgctgctcttccgtgga
ggtgcagaggcttcgtgccagaaaggggagcgcgtcctgctcgcccagtacctggggcag
tctggccctgcgtcgctccctcccacactccacctcgtctgtacccagttctctctctac
ctggtggacgagcgccttcccctggtgcccatgctgaagtgggatcatggcctgccctcc
ccacccctgctggcccggctgctgcctccacctctgagtggtggcccttggcccctgctg
ctgggaggccagggcggacagctacagctgctgcacatcgcaggagaggtggcctccaca
ccccggctggcagggcccccccagtctcttccgtccaggaccgactccctctccgctttt
cccgtgctggagcccaagagccagcagcgtctacaggagcggctgagtgcgccgaccata
ggcctggccagtaccatcccaccctcagcttccacgccagtcctgtccatcttccacctg
tcagccgctggggacatcttctaccagcacttccacctccgggcagaccctagccttctg
cacagagaccctgggtctgactgccatgcccccacaatgacagcgccctcactggacaag
acacccacaccccccacagcttcctggaccccccaggccaccgctctctgtagccagtgg
ctgacagccctgatggaggtaccctcggcaccccgggcgtgggctgcacccaccttttcc
caccgccacctgctgggcagcctggagccccacggcgtccaggggactgtgcctgaggcc
ctccgggcggccatggctgcggggcggctgctgcggcagagggacctgggctcgctcccc
agggcagagccgcctcccgccccagagtcaggtccagaggatgagctcaccgagcgtctg
ggggaagcctgggaaggccgaggggctgcctggtgggccaggcagctgggcagggcctcg
gcgtccgggaagcagtccaagcggcccaagcgccgcactcagctgtccagcaccttctcc
tcactcagcagccgcccggagctctcggatgccatcagcccccctcccagcccagatcga
gcacctgaggccaggcctcagcccccagcaacaccgccctcccaggagttgactcaggag
ccatgggccgagggtgtcccctcagagcgccagcagacccttcgggactacatggccaac
ctgccactccgaagggacaccacaggacatgttgccacacccccctcccaggcttccagc
atcccagccaccccttcccagcagcaggccgaggaccacatggccaagctgccactccaa
ggggataccctgggacatgctgccacacccccttcccaggcctctagtgcccgggccacc
cactctcagcagcgagcgcccgtcctctctggctctcagccccgtcggaagaagcctcgc
atgggcttctga
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