KEGG   Tupaia chinensis (Chinese tree shrew): 102474495
Entry
102474495         CDS       T02978                                 
Symbol
PSMC5
Name
(RefSeq) proteasome 26S subunit, ATPase 5
  KO
K03066  26S proteasome regulatory subunit T6
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03050  Proteasome
tup05010  Alzheimer disease
tup05012  Parkinson disease
tup05014  Amyotrophic lateral sclerosis
tup05016  Huntington disease
tup05017  Spinocerebellar ataxia
tup05020  Prion disease
tup05022  Pathways of neurodegeneration - multiple diseases
tup05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102474495 (PSMC5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102474495 (PSMC5)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102474495 (PSMC5)
   05012 Parkinson disease
    102474495 (PSMC5)
   05014 Amyotrophic lateral sclerosis
    102474495 (PSMC5)
   05016 Huntington disease
    102474495 (PSMC5)
   05017 Spinocerebellar ataxia
    102474495 (PSMC5)
   05020 Prion disease
    102474495 (PSMC5)
   05022 Pathways of neurodegeneration - multiple diseases
    102474495 (PSMC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tup03051]
    102474495 (PSMC5)
Proteasome [BR:tup03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     102474495 (PSMC5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 AAA_lid_PRS2_C nSTAND3 PRS7_OB RuvB_N TIP49 AAA_18 AAA_28 Mg_chelatase AAA_3 AAA_33 NPHP3_N AAA_14 Parvo_NS1 ATPase AAA_17 PhoH FapA IstB_IS21 AAA_24 AAA_7 AAA_25 DUF815 DUF7006 Sigma54_activat bpMoxR DUF5906 RNA_helicase ABC_tran Zeta_toxin AAA_11 AAA_19 TsaE HR1 Prominin
Other DBs
NCBI-GeneID: 102474495
NCBI-ProteinID: XP_006146860
LinkDB
Position
Un
AA seq 406 aa
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcgcttgacggtccagagcagatggagctggaagaggggaaggcaggcagcggactc
cgccagtattacctgtccaagattgaagaactccagctgattgtgaatgataagagccaa
aacttgcggaggctacaggcacaaaggaatgagttaaatgcaaaagttcgccttttgcgg
gaagagctgcagctgctgcaggaacagggctcctatgtcggggaagtggtccgggccatg
gacaagaagaaggtgctggtcaaggtgcatcctgagggaaagtttgtcgtagacgtggac
aagaatatcgacatcaacgatgtgacacccaattgccgggtggctctaagaaatgacagc
tacactctgcacaagatcctacccaacaaggtggacccactggtgtcactgatgatggtg
gagaaggtgccagactcaacctacgagatgattggtggactggacaagcagatcaaagag
atcaaagaagtgatcgagctgccagtcaagcaccctgagctctttgaagcactgggcatc
gcacagcccaagggtgtgctgctgtatggccccccaggcacggggaagacactgctggcc
cgagctgtggctcatcacaccgactgcaccttcattcgtgtctctggctctgaattggta
cagaaattcattggtgaaggggcaagaatggtgagggaactgttcgtcatggcccgagaa
cacgctccatctatcatcttcatggatgaaatcgactctattggctcctccaggctggaa
gggggttcagggggtgacagtgaggtgcagcgcaccatgctagagcttctcaaccagctg
gatggctttgaggccaccaagaatatcaaggtcatcatggctaccaacaggattgatata
ctagactcggccctgcttcgcccgggacgcatcgacaggaaaattgaattcccacctccc
aatgaggaggctcggctggacattctgaagatccattctcggaaaatgaacctgacccgg
gggatcaacctgagaaaaattgctgagctcatgccaggagcatcaggggctgaagtgaag
ggagtgtgcacagaagctggcatgtatgccctgcgggaacggcgagtccatgtcacccag
gaggacttcgagatggcagtggccaaggtcatgcaaaaggacagtgagaaaaacatgtcc
atcaagaaactgtggaagtga

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