Tupaia chinensis (Chinese tree shrew): 102474758
Help
Entry
102474758 CDS
T02978
Symbol
ATG4D
Name
(RefSeq) autophagy related 4D cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04136
Autophagy - other
tup04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102474758 (ATG4D)
04136 Autophagy - other
102474758 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tup01002
]
102474758 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102474758 (ATG4D)
03029 Mitochondrial biogenesis [BR:
tup03029
]
102474758 (ATG4D)
Peptidases and inhibitors [BR:
tup01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102474758 (ATG4D)
Membrane trafficking [BR:
tup04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102474758 (ATG4D)
Mitochondrial biogenesis [BR:
tup03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102474758 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102474758
NCBI-ProteinID:
XP_014448330
LinkDB
All DBs
Position
Un
AA seq
468 aa
AA seq
DB search
MWLHLLEPRFAQRAGRPGARRPRGPRIPDPNGLGPSGASGPALGSPGAAPGEPDEVDKFK
AKFLTAWNNVKYGWAVKSRTSFSKISSIHLCGRRYRFEGEGDIQRFQRDFVSRLWLTYRR
DFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWAEGMGLGPPELSRSASPS
RYHGPAHWRPPRWAQGTPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDW
YGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVVRLVARPDPAAEWKSVVILVPV
RLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIPPTDDFLLYLDPHYCQPTVDV
SQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFEMLCSELTRVLSSSSATERYP
MFTLAEGHAQDHSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSEDFVFL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgcatctattggagcctcgttttgcacagcgggcggggcggccgggggcccgc
agaccgcggggtccccgaatcccggaccccaacggcctggggccctctggagccagcggc
cccgctcttggttcgcccggagccgccccgggggagccggacgaagtggacaagtttaag
gctaagttcctgacggcctggaacaacgtcaaatatggttgggccgtcaaaagcaggacc
agctttagcaaaatttccagcatccacctctgcggccgccgctaccgattcgagggcgag
ggtgacatccagcgtttccagcgagactttgtgtcccgtctatggctcacctaccgccgg
gacttcccgcccctagctgggggctgcctgacctccgactgtggctggggctgcatgtta
cgcagcggccagatgatgctagctcagggcctgctgctccatttcctgccccgagactgg
acgtgggccgagggcatgggcctgggccctcctgagctgtccaggtcagcctcacccagc
cggtaccatgggcctgcccactggaggcccccacgctgggcccagggtacccccgagctg
gaacaggaacgccggcaccgacagattgtgtcctggttcgctgaccacccccgggccccc
ttcggcctacaccggctggtggagcttgggcagagctcgggcaagaaggcgggtgactgg
tatgggccgtcactggtggcacacatcctcaggaaagccgtggagagttgctcagaggtg
acccgcctggtggtgtatgtctctcaggattgcacagtgtacaaggcagacgtggtgcgc
ctggtagccaggccagaccccgccgccgagtggaagtctgtggtcatcctggtacccgtg
cgactgggcggcgagaccctcaaccctgtgtatgtgccctgcgtgaaggagctcctgagg
tcagagctgtgcctgggcatcatggggggcaagccgcgacactcgctgtacttcatccca
cctacagatgatttcctgctctacctggacccccactactgccagcccactgtggacgtc
agccaggctgacttccccctagagtccttccattgcacctcgcctcgcaagatggcgttc
gccaagatggacccgagctgcactgtgggcttctacgctggggacaggaaggagtttgag
atgctctgctcagagctgaccagggtcctcagctcctcctcagccacggagcggtacccc
atgttcaccctggccgagggccatgctcaggaccacagcctggacgacctctgctcccag
ctgtcccagccgacgctgcggctccctcgcactgggcgtctcctcaaggccaaacgcccc
agctccgaggactttgtgtttttataa
DBGET
integrated database retrieval system
