Tupaia chinensis (Chinese tree shrew): 102474854
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Entry
102474854 CDS
T02978
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102474854
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102474854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102474854
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102474854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102474854
NCBI-ProteinID:
XP_014442490
LinkDB
All DBs
Position
Un
AA seq
608 aa
AA seq
DB search
MAFNFGAPSSASGTAAATAAPAGGFGGFGTTSTTAGSAFSFSTPANTDTTGLFGGTQNKG
FGFGTAFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQTRLGGLFSQPTQAPTQSNQLINT
ASALSAPTLLGDERNAILAKWNQLQTFWGTGKGYINNNIPQENPFCRFKAVGYSCLXGWD
EDGLIVLVFNKRETDIRRQQQQLVESLHKVLGGIQTLTVNVKGIKTLPDDQTEVVIYVVE
QSPNGTSRRIPATTXYAHFEQTNIKTQLQQLGITLSMTTTELSPAQIKQLLQNPPAGVDP
VIWEQAKVDNPDAEKLIPVPMVGFKELPHRLKVVQDQMTKQHQTRLDTISEDISELQKNQ
ITTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYANQADEEQLRVQPDTIQCELNAPT
QFKGPLNELIAQIRMQNNFGAVKSEERCYIDADLLQEIKQHLKQXQEGLRGLPLALLYRS
PTASTPCEDPCPGANGPGYFRCQYVARVFGNLSDERQQSTVEGGFEVRQTQHTHKGIASQ
GPILLYYFLVAEHECFSTGVTGAFGAFHGKAAGNGQNLWYLLRREQQNLGLLDMLGRSIP
FHTVLRDH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggctccctcgagcgcctcaggcactgctgcagctaccgcagct
cctgcgggtgggtttggaggatttgggacaacatcaacaactgcaggttctgcgttcagc
ttttccaccccagctaacacagacaccactggactctttggtggtactcagaacaaaggt
tttggatttggtactgcttttggcacaacaacgggaactagtactgggttaggtactggt
ttgggaactggactgggattcggaggatttaacacacagcagcagcagcagactaggtta
ggtggtctcttcagccagcctacacaagctcctacccagtccaaccaactgataaatact
gcaagtgctctttctgctccaacactactgggagatgagagaaatgctattttggcaaaa
tggaatcaactgcagaccttttggggaacaggaaaaggatatatcaacaataacattcca
caagaaaatcccttctgccgatttaaggcagtaggctatagctgcttantgggctgggat
gaagatgggttaatagttttagttttcaacaaaagagaaacagatattcgaagacagcaa
cagcaattggtagaatcattgcataaagttttgggaggaatccagaccctcaccgtaaat
gtaaagggtattaaaactttgccagatgaccagacagaagttgtcatttatgttgttgag
caatctccaaatggtacttcaagaagaattccagctacaacannctatgcccattttgaa
caaaccaacataaaaacacaattgcagcagctcggcataaccctttctatgactacaaca
gaactttctcctgcgcagatcaaacaacttttacagaatcctcctgctggtgttgatcct
gttatctgggaacaagccaaagtggataaccctgatgctgaaaagttaattcctgtacca
atggtgggtttcaaagaacttccccatagactgaaggtggttcaagatcagatgactaag
cagcatcagaccagattagataccatatctgaagatattagtgagctacaaaagaatcaa
atcacaactatggccaaaattgcacaatacaagaggaaactcatggatctttcccacaga
accttacaggtcctaatcaaacaggaaattcaaaggaaaagtggctatgccaatcaggct
gatgaagaacagttgcgagttcagccagatacaattcagtgtgaactgaatgcacctacc
cagttcaagggcccactaaatgaactgatagcccaaatcaggatgcagaataattttgga
gctgtcaaatctgaagaaagatgttacatagatgcagatctgttacaagaaatcaagcag
catttgaaacaatagcaagaaggccttaggggtcttcctctggctctcctctaccgttct
cccactgcgtctacaccctgtgaggatccttgtccaggtgccaatggtccaggatatttc
aggtgccagtatgtggcacgagtatttggcaatctctcagatgaaaggcaacaaagcaca
gtggaaggtggctttgaagtcaggcagactcagcatacacataaaggcatagcttcccaa
ggtcccattctgctctattattttctagtggctgaacatgagtgcttctcaactggagtt
actggtgcctttggtgccttccatggcaaggcagcaggaaatggacaaaatctgtggtat
ttgctcaggagagaacaacagaatctaggacttctggatatgctgggacgctccatcccc
ttccataccgtccttcgggatcactag
DBGET
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