Tupaia chinensis (Chinese tree shrew): 102475671
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Entry
102475671 CDS
T02978
Symbol
DCAF1, VPRBP
Name
(RefSeq) DDB1 and CUL4 associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102475671 (DCAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tup01001
]
102475671 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102475671 (DCAF1)
Enzymes [BR:
tup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102475671 (DCAF1)
Protein kinases [BR:
tup01001
]
Serine/threonine kinases: Other
Other
102475671 (DCAF1)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102475671 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
102475671
NCBI-ProteinID:
XP_006169418
LinkDB
All DBs
Position
Un
AA seq
1520 aa
AA seq
DB search
MKKELPHGQAMTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYR
KGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLL
DIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQ
LVAIVLRRLRELQLQEVALRQENKRPSPRKVSSEALLPLDEEAVDMDYGDMAVDVVDGEQ
EEASRDMEISFHLDSGHKTSSRVNSVTKPEEGGLKKNKLAKQGDRESFRKAKQKLGFSSS
DADRMFVELSNSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQL
GSRELMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAA
TGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSF
RAVLELFDRYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEA
HLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEV
FLKLSCVQLLLQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEA
GSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRK
LPQTPKSSEHTLAKMWNVVQSNNGIKVLLSLLSVKMPITDADQIRALACKALVGLSRSST
VRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLA
RLQKADVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPV
ATAASPVSLPRTPRIANGIPTRLGSHAAVGASAPSAPPAHPQPRPPQGSLTLPGPSYAGN
SPLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITE
YLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGC
FDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEAS
YNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQD
RVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQ
AIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYG
AMLQADDEDDLMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIE
NQGSMDALNMDTVCRLYEVGRQRLAEDEDEEEDQKRMEEEEQEEEDDDEDDDDTDDLDEL
DTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILG
DTDSSDNSDLEDDIILSLNE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagagcttccccacggccaagctatgactactgtagcggtgcatgtggactcc
aaggccgagctcactaccctgctggaacagtgggaaaaggaacatggcagtgggcaagac
atggtaccaatccttaccaggatgtctgaattgatcgaaaaagaaaccgaagaatatcgg
aaaggggatccagacccatttgatgatcgacatcctggtcgagctgatcctgagtgtatg
ctgggccacttgctgagaatactcttcaagaatgatgatttcatgaatgcactggtgaat
gcatatgtgatgacaagccgagagccccctttgaacaccgcggcttgcaggctcctacta
gacatcatgccagggctggaaactgctgttgtctttcaagaaaaggaaggaatagttgaa
aatctctttaaatgggcacgagaggctgatcaaccattgagaacatattctactggactg
ctaggaggtgctatggaaaatcaagacattgctgccaactacagagatgaaaattctcaa
ctggtggcaatagtacttcgaagactgagggaactgcagcttcaggaagtggctttgcgg
caagaaaacaagcgtcccagcccgcggaaggtctcttctgaagcccttctgcctttggat
gaggaagccgtggatatggactatggtgacatggcggtagatgtagtggatggagaacag
gaggaagcttctagagacatggagatctcttttcatcttgattctggccacaagactagt
agcagagtgaactcagtaaccaaacctgaggaaggaggattgaagaaaaacaagctggca
aaacagggtgacagggagagttttaggaaagctaaacagaagttgggtttctcgtcttct
gatgcagatcgcatgtttgtcgagctgtctaatagcagctggtcagaaatgtctccctgg
gtgattggcaccaattataccctttatcctatgactcctgctattgaacagcgactcatt
ctccaatatttgactcctttaggagaatatcaggagttacttcccatatttatgcagctt
ggatcacgggagttgatgatgttctatattgatctgaaacagactaatgatgtcttgctg
acattcgaggcactcaagcacctggcatctctcctgctccacaacaaatttgccacagaa
tttgttgcgcatggcggagtacagaaattactggaaattcctcgtccttccatggctgct
actggcgtctccatgtgcttgtattacttgtcctacaaccaggatgccatggaaagagtg
tgcatgcatccccacaacgtcctgtctgacgtggtgaactacaccctgtggttaatggag
tgctctcatgcctcgggatgctgccatgctaccatgtttttctcaatttgcttctcattt
cgggccgtcttggagctctttgaccgctatgacggtcttcgtcgtctggtgaacttgatt
agtactttggagattctgaatttggaagatcagggtgcacttctgagtgatgatgaaata
tttgctagccgccaaactggaaaacatacctgcatggccttgcgcaaatattttgaggct
cacctggccattaaattggaacaagtgaagcagtcacttcagaggactgagggtggcatt
cttgtccaccctcaacccccatacaaggcctgttcatatactcatgaacagattgtggaa
atgatggagtttttgatagaatatggtccagcgcaactctactgggaaccagctgaagta
ttccttaaactttcttgtgtgcaactcttactgcagcttatttctatcgcctgcaattgg
aagacctattacgcaaggaatgacaccgtgcgctttgctttggatgtcctggcaattctc
actgtggtgccaaagattcagctccagttggcagagtcagtggacgtgctggatgaggcg
ggctccaccgtctccactgtaggtatcagcattattttgggagtggctgagggtgagttc
tttatccatgatgctgaaattcagaagtcagcacttcagattatcatcaattgtgtatgt
ggcccagataaccgaatttctagtattggcaaatttatctcgggaacgcctcggagaaaa
ctgcctcagacgcccaaaagcagtgagcacaccctggccaagatgtggaatgtggtccag
tccaacaatggcatcaaggtgctcctgtccttgctatctgtcaagatgcccatcacagat
gccgaccagatccgggccctggcatgcaaggccctggtgggcctatctcgcagcagcacc
gtgcggcagatcatcagcaaactgcccctcttcagcagctgccagatccagcagctgatg
aaagagccggtgctgcaggacaagcgcagtgaccatgtcaagttctgcaagtacgctgct
gagctcatcgagcgggtgtccggaaagccactcctcattggcaccgacgtgtccctggca
cgactgcagaaagcagatgttgtcgcacagtcaaggatctccttccctgagaaagagctg
cttctgttgatacgaaaccatctcatttctaaagggcttggagagacggcgactgtactg
acaaaagaggctgacctacccatgactgctgcctcccattcctctgccttcaccccagtt
gccactgctgcatctcctgtgtctcttccccgaaccccgcgtattgccaacggcattcca
actcgactgggcagccatgctgctgtgggtgcctctgccccttctgccccccctgcccat
cctcagccacggccaccccagggctcactaaccctgcctggcccatcttatgcaggcaac
tcccctttgattggtaggatcagttttatcagagagaggccgtcaccctgcaatggcagg
aaaatcagagtgctgcggcagaagtcggaccatggtgcctatagccagagcccggccata
aaaaagcagttggacagacaccttccttccccacctacgctggacagtatcatcacagaa
tatcttagagagcagcatgctcgctgcaaaaacccggttgctacctgcccacctttctct
ctctttactcctcaccaatgtcctgagccaaaacagaggcggcaggcgcccataaacttt
acctcaaggctaaaccgcagggcatcgttcccaaagtacggaggggtggatggcggatgc
tttgataggcaccttatctttagcagatttcgtcccatttcagtgtttcgggaagccaat
gaagatgagagtggcttcacctgctgtgctttctcagcacgggagcggttcctgatgctt
ggcacctgcactgggcagctgaagctctacaatgtgttcagtggacaggaagaggccagc
tacaactgtcacaactcagctatcacgcatcttgaaccttcccgggatgggtccttgttg
ctgacatctgcgacttggagccagcctctgtctgcactttggggaatgaaatcagtattt
gatatgaagcattccttcacagaagatcactatgttgagttcagtaagcactcacaggac
cgggtcataggtacaaaaggagacattgcccatatttatgatattcagactggcaacaag
ctgttgactctgtttaacccagatcttgccaacaactacaagaggaattgtgccaccttt
aatcctacagatgatcttgtcttaaatgatggcgtcctctgggatgtccgctctgcacag
gccatccacaagtttgacaagttcaacatgaacatcagtggtgttttccatccaaacggg
ctggaggtcatcattaatactgagatctgggaccttcgaactttccatctgttacatact
gtccctgctctggatcagtgccgtgtagtgttcaaccacacggggactgtgatgtatgga
gctatgttgcaggcagatgatgaagatgacttaatggaagagaggatgaagagccctttt
gggtcatccttccgaacgttcaatgcaactgattacaaacctatagcaaccattgatgtg
aaacggaacatctttgacctgtgtacagacaccaaagactgctatcttgctgtcattgag
aatcaaggcagcatggatgccctgaacatggacaccgtgtgcaggctgtatgaagtgggc
aggcagcgtctggcagaggatgaggatgaagaggaggaccagaagcggatggaagaggaa
gagcaggaggaagaagatgacgatgaagatgatgatgacactgatgatttagatgagctt
gacaccgaccagttgctggaggcagagttggaagaggatgacaacaacgagaatgcaggg
gaagatggggacaatgacttctctccttctgatgaggagctagcaaaccttctagaggag
ggagaggacggggaagacgaagactctgatgcagatgaggaagtggaactgatcctgggg
gacactgacagctctgacaactctgatttggaagatgacatcatcttatctctgaatgag
tga
DBGET
integrated database retrieval system
