Tupaia chinensis (Chinese tree shrew): 102475886
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Entry
102475886 CDS
T02978
Symbol
CHD9
Name
(RefSeq) chromodomain helicase DNA binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tup03036
]
102475886 (CHD9)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102475886 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
102475886
NCBI-ProteinID:
XP_014443262
LinkDB
All DBs
Position
Un
AA seq
2895 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDFEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQSKSFVAHHDFALFQASEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKTFMDVNVSGPHRVSVNHPPQITNTSTSQQSLPMQQFSQTSNPS
VHFLKCSSHQEGNFNGPSANMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQDSTQHILNPSTSLNSNNFQMLHSAHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESTFGQDNSSHVLDHDLDRQFTSHLVTRPSDMAQTQLQSQTRNWHSSFSNHHLHDRSRL
CLQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASVEGREEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLII
TLGKKQKRKNESSDEISDAEQMPQHTFKDQDSQKRRSNRQIKRKKYAEDAEGKQSEEEVK
GSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTIKKEISPGVMIDTEEFFVK
YKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDR
PPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQ
GRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPTASDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGRENNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISG
RNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLIHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPADFDADKS
LLIGVFKHGYEKYNTIRADPALCFXGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPAIFK
DDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQIQQIQ
PTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFD
WTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEERASRTL
YRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVSRTDYH
ILRDPELSFMAAQRNYNQSKMAHSRTPTPLLQQYQVALSASPLTSLPRLLDAKGIILEDM
KVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSSGKGETDRRMV
AARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSS
SSSSSSCSSASSSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTAHVKAYDEESVASL
STTQDETQDSFQMNNGTPESAYILPGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSA
RRTYDANTVASFYTTKLLDSPGAATEYSETSVPTPPGAGVKEEHDQSTQMSKVKKHVREK
EFTVKIKDEGGLKLTFQKQGLAQKRPFESEDSAMGQQQYLTRLRELQSASETSLVNFPKS
VPVSGTSIQSTVGANGVILDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGLTTSQ
VSPGINPALSYTQSQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDL
GAFIPKMQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDL
CRFLKENSEYGVAPEWGEVVKQSGFLPESMFERILTGPVVREEVSRRGRRPKSGIAKASA
AAAAAATTSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSSGGE
AKNMAAMFPMLLSGMAGLPNLLGMGGLLTKPTESGTEEKKGSDSKEQEGKKERTESQSSE
NGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSN
TFDVQKNKNSDLGSSKSAEVKEEDSRVRDQENKGGTEPSPLNENSTDEGSEKAEASSGSD
STSSSSEDSDSSNED
NT seq
8688 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgacgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagattcactgaatcatgttcagggtactcca
acacatcagaagatgactgattttgaacagttaaatcaatttgactcaatgaaatttcac
caagttaatcagtcttttggtagtccagctgaacatgtattatctcctcattctcaattt
aattgttctccaatccacccccaaaaccagcccaatggtttatttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaaatcaaaatggatctcct
tttcaccaacaaggacattcacactctatgcatcaaagtaaaagctttgtggcacatcat
gactttgccttatttcaggccagtgaacagcaaacacagtgcacttcactacgctcacag
cagaacagaaataatctcaacccagggcaaaattctcttagccagtctaaaacttttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattactaat
acgtctacatcacaacaatctcttccaatgcagcaattttctcagacgtccaatccttca
gttcacttcctcaagtgtagcagtcatcaagaaggaaattttaatggaccttctgcaaat
atgacttcttgttccgtcagtaattcacaacagttttcttcacattattccttttctagt
aatcatatatcaccaaacagcctccttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactggaagtaattccttttcacctcataggggaatcaag
caagactccactcagcatattttaaaccccagtacatcgttgaattcaaataatttccaa
atgttacattcggcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgactcaggaactcagatgggccatttcaatgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccattcacaggacttgacccagaggacctccttcaagagggtctccttccacaattt
gatgagtcaacatttggacaagataattcaagtcatgttttagatcatgaccttgatcgg
cagtttacttcacatcttgtaactcggccttctgatatggctcagactcagttgcagagt
cagactcggaactggcattcatcattttctaatcatcatttacatgacagaagtcgccta
tgtttacagcgacagcctccatcttccaagaagagcgatggttctgggacatatactaag
ttgcagaatacccaggtgagagtcatgtctgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaagctaatcgtataatatcagaggccatagcaaaagcaaaggag
cgtggggaacgcaatattccacgagtaatgagccccgaaaactttcctagtgcttcagtt
gaaggaagagaggaaaagaaaggtagacggatgaaatccaagccaaaggacaaagacagc
aaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattatt
acattgggtaagaaacaaaaaagaaagaatgagtcttccgatgaaatatctgatgcagag
cagatgccacagcatacattcaaagatcaagactctcaaaaaagaagatcaaatcgacaa
attaaaagaaaaaaatatgcagaagatgcagaaggaaaacagtctgaagaagaggttaag
ggttctatgaaaataaaaaagaattcagctcctttacctggggaacaacctttacaatta
tttgtggagaatccaagcgaagaagatgctgcaattgtagacaaaatactgtcttctaga
actataaaaaaggaaatatcacctggagtgatgattgatacagaagagttttttgtaaaa
tacaagaattactcctatcttcactgcgagtgggccacagaacagcagcttttgaaagat
aaaagaatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacatttt
tttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagtttta
gaagtttctttttgtgaagataaggatactggtgagcccgttatttactacttagtaaaa
tggtgctcattgccatatgaagatagtacttgggaactaaaagaagatgtagatcttgca
aaaatagaagagtttgaacaattgcaagcttcaagacctgatacaagacatttggaccgt
cctccctctaatatttggaagaaaatagatcaatccagggactataaaaatggcaatcaa
ctcagggaatatcaactggaaggactcaactggctcttgttcaattggtacaataggcga
aactgcattttagcagatgaaatgggtcttggcaaaactattcaatcaattacattcctc
tacgaaatccttctgactggtataagaggacctttcctgattattgctccactttctacg
attgcaaactgggagagagaatttcgtacatggactgacattaatgttgtggtttatcat
gggagcctgatcagcagacagatgatacagcaatatgagatgtacttcagggattcacag
ggacgtattattcgcggagcatacagatttcaagccatcatcacaacttttgaaatgatt
cttgggggctgtggagagcttaatgcaattgaatggcgatgcgtgattattgatgaagca
cataggttgaaaaataaaaattgtaaactcctagaaggtctgaaactcatgaacctggag
cacaaggtacttttgactggcacacctctccaaaatacagttgaagaactattcagtctc
cttcactttctcgaaccattaaggtttccttctgaatcaacatttatgcaagaatttggg
gatctgaaaacagaggaacaggtgcagaaactgcaggctatcctgaaaccaatgatgttg
cggcgattaaaagaagatgtagaaaagaagttggcccctaaagaggaaactatcattgaa
gtagaacttacgaacattcagaagaaatactaccgggctattttggagaaaaacttttca
tttttatccaaaggagctgggcaaactaatgtacctaacttggtcaataccatgatggag
ctcaggaagtgttgtaatcatccatatcttatcaaaggtgctgaggaaaaaatacttggg
gaatttagagatacatataatccaactgcttctgattttcatcttcaagcaatgattcag
tctgctggtaaattagtccttattgataaattgctccccaaaatgaaagcaggaggtcat
aaagtgctcatcttctctcagatggttcgctgccttgatatcctggaggactatctcata
cataaaagatatttatatgagcgaattgatggacgagtcagagggaatcttcgacaagct
gctattgatcgattcagtaaacctgattcagatcgatttgtttttctcttgtgtacccga
gctggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgat
tggaatcctcaaaatgaccttcaggcccaagctcgttgccacagaattggtcagaacaaa
gcagttaaagtctacagactggtaactcgtaactcatatgaaagagagatgtttgaccga
gccagtctgaaactgggcctggataaggctgtgttacagagcatgagtggaagagaaaat
aatgttggtggtatccaacagctttccaaaaaggagatagaagacctgcttcgaagaggt
gcttatggagccattatggaagaagaagatgaagggtctaagttctgtgaagaggatatc
gatcagattttactacgtcgtacaaaaactattacaattgaatcagaaggacgtgggtca
acatttgccaaggcgagttttgtggcatctggaaaccggacagatatttccctagatgat
cctaacttctggcaaaaatgggctaaaaaggcagaaatagatatagatgccatcagtggc
agaaacagcttggttattgatactccaagaatcaggaagcaaacaagacccttcagtgct
acaaaggatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaaacccaaa
ctccggagaccttgtgaccgttccaatggctatggaagaactgaatgtttcagagtagag
aaaaacctgctagtttatgggtggggccgatggagagagattctatctcatggtcgtttt
aaaaggcaactcaatgagcatgatgtagaaataatttgtagagccctcctagcatattgc
cttattcactaccgaggagatgagaaaattaaaggtttcatatgggatctcattactcca
actgaagatgggcagacacgagagctacagaatcatctaggcctttcagctcctgtacct
aggggtcgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaagca
gaatggcttcgaaagtacaatcctgagcagttgcttcaagatgaaggctacaaaaaacat
ataaaacaccactgtaacaaagttctgcttcgtgtgagaatgctgtattatctaaagcaa
gaagtcattggaaatgagtgtcagaaagtatttgacggagtcgatgcaagtgacattgat
gtttgggtaccagaaccagaccactcagaagttcctgctgactttgatgctgataagtca
ctccttattggagtttttaaacatggttatgaaaaatataacactatccgagcagaccct
gcattatgctttnttggaaaacctgatgataaagcagttgctgctgaacagagagcaaat
gattatatggatggggatgtggaagatccagaatataaacctgccccagccatctttaaa
gatgatatagaggatgatgtttcctcaccaggagatcttgttatagcagatggagatggt
caactgatggagggtgataaagtatattggcctactcagtcagctttaaccacacgtttg
aggcgtctcatcactgcatatcagcgtactaataaaaacagacaaatccagcagatacaa
cctactttctcagtgcctgccagtgtaatgcagcctctttatgaagaagccactcttaat
cctaaaatggcagccaagatagaaagacaacagagatggacaagaagagaagaagctgac
ttttatagagttgtatctacgtttggagtagtttttgatcctgacagaggccagtttgat
tggacaaaatttagagctatggctaggctacataagaaaaccgatgatagtttggagaaa
tacttgtacgcattcatgtccatgtgccggagggtttgtcgtcttccttccaaagaagaa
ttggtggatccaagtatttttatccagccaataacagaggaacgtgcttctaggactttg
tatcgcattgaacttttgaggaaagtacgggaacaggcccttcgacatccacagttgttt
gaacgcttgaagctttgccatccaaatccagatttaccagtctggtgggaatgcggccct
catgacagggatttgcttattggcgctgctaaacatggggtgagccgaacagactatcac
attcttcgtgatcctgaactctcatttatggcagctcagaggaactacaatcaaagcaaa
atggctcattcaaggactcctaccccacttttacagcaatatcaagtagcactttctgct
tcccctcttacctctttacctaggctcctggatgctaaaggtattattctagaagatatg
aaagttaaaagtgaaaaccttaaagaggagcctcagtcatctgaagaagaatctatgtct
tctgtagaaaccaggacactaataaagtctgagcctgtaagtccaaagaatggtgttttg
ccacaggctactggagaccagaaatctagtggaaaaggtgaaacagacagacgcatggtt
gcagccagaacagaacccctaaccccaaatccagcttctaagaaacaaagagtccacaaa
agaggatcagaatctagttctgattctgactctgattctgagagatcatcctgttcttcc
agatcatcatcttcctcgtcttcctcctcttcttgttcccactctcgttcaggttccagt
tcttcttcatcctcatcttgttcttcagcatcatcttcatcttcgtcgtcctcttcttcc
tcttcctcatcatcctcttcatcttcatcagaagaaagtgacagtgaagaagaggaagtc
caaaagcgagaaggtaccgcccatgtaaaagcctatgatgaagaaagtgttgcatcactg
agcactacccaggatgagacccaggatagtttccaaatgaacaatggaacaccagagtct
gcttacatcttgccaggtggatacatgctggcagcctcatactggccaaaggatcgtgtg
atgatcaatcgattggacagtatttgtcaaacagttctgaaagggaagtggccttcagct
agaagaacttatgatgctaatacagtggcttctttctataccacaaaactgctggacagc
cctggagcagccacagaatacagcgagaccagtgtacccactcccccaggtgctggtgtt
aaagaagagcatgatcagtcaacacagatgtcaaaggtgaagaagcatgtacgagaaaag
gagtttacagtgaaaatcaaagacgaaggtggtttgaagctgacatttcagaagcaaggg
cttgctcagaaaagaccatttgagagtgaagatagtgctatggggcagcagcagtacctc
actagacttcgggagcttcaaagtgcatcagagaccagcctcgtcaattttccaaaatct
gtgccagtatcaggtacttccattcaatcaaccgttggtgccaatggagtgatattagac
aaccagcctatagtcaaaaaaaggcggggaaggaggaagaatgtagaaggtgttgacatc
ctcttttttaacagaaataaaccacctaatcatgttacattaggcttaaccacctcacag
gtttccccaggaataaatccagctctatcctatacgcaatctcaaggaattcctgataca
gaaagtccagttccagttattaatctgaaagatgggacaagacttgcaggtgatgatgca
ccgaagagaaaggatttggaaaaatggcttaaggagcacccaggttatgtggaagattta
ggagcttttattcctaaaatgcaacttcatgagggaaggcccaaacaaaaaaggcatcgt
tgcagaaaccccaataaactagacattaatagtcttactggagaagaacgtgttcagctg
attaacagaagaaatgccagaaaggtcggaggtgcctttgctccccccttgaaagatttg
tgtagattcctaaaagaaaattcagagtatggagtagctcctgaatggggagaggttgtt
aagcagtctgggtttcttccagaaagtatgtttgaacgtattctcactggtcccgttgtg
agagaagaagtaagcaggcgggggagacgacctaagagtggaattgcaaaagcctcggca
gcagcagcagctgcagcaactaccagtgtttcaggcaatcctttgttagccaatggatta
cttccaggtgtggatctcacaactcttcaggccttacaacagaacctacaaaacttacag
tcactgcaagtaactgcagggttgatgggaatgcctgctggcctttcttctggaggagaa
gctaaaaatatggctgctatgttccccatgctgctttcaggaatggcgggattaccaaat
ctgttgggcatgggggggctccttacaaagcctacagaatctgggacagaagagaaaaag
ggaagtgactctaaggagcaagaaggaaaaaaagaaaggacagagagccaaagttcagag
aatggtggagaaaactctgtgtcaagttctccttcaacgtcttctactgctgcattaaat
acagctgcagctgccaacccattagctcttaacccactattactatccaatatactttat
ccagggatgcttctcactccaggccttaatcttcatattccaactttgtcccaatccaac
acttttgatgtacagaaaaacaaaaacagtgacttaggctcgtcaaagtctgcagaagta
aaggaagaagattccagagttagagatcaggaaaacaaaggaggaactgagccaagtcct
ctcaatgaaaacagcacagatgagggttcagagaaagcagaagcttcatctggatctgac
agtacatcatcgtcatctgaggactcagattctagtaatgaagactga
DBGET
integrated database retrieval system
