Tupaia chinensis (Chinese tree shrew): 102475988
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Entry
102475988 CDS
T02978
Symbol
RBM39
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tup03041
]
102475988 (RBM39)
Spliceosome [BR:
tup03041
]
Common components
Common spliceosomal components
General mRNP proteins
102475988 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
102475988
NCBI-ProteinID:
XP_006144136
LinkDB
All DBs
Position
Un
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcgatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgccaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacggaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaagaaagagatgcaagaacagttttctgcatgcagctg
gcagcaagaattcgacccagggatttggaagagtttttctccacagtaggaaaggttcgt
gatgtgaggatgatttctgatagaaattcaagacgttccaaggggattgcttatgtggag
tttgttgacgttagctcagtgcctctagcaattggattaacgggccaacgagttttggga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aacttacagaagggaagtgctggacctatgaggctttatgtgggctcattgcactttaac
ataactgaagatatgcttcgggggatatttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatcaaaggggtatggatttataacgttctctgac
tctgaatgtgccaaaaaggctttggaacagcttaatggattcgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgaactgacgcttccagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctacaattaatg
gcaagacttgcagaaggtacaggtttgcagattccaccagcggcacagcaagctctacaa
atgagtggttctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgccacacaatgtttccaactgtctaatatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggtgtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgccgcagctattgctgctgtaaatgcactgcatggcaggtggtttgctggtaaaatg
ataacagcagcctatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggtcccaagtagacgatga
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