KEGG   Tupaia chinensis (Chinese tree shrew): 102475988
Entry
102475988         CDS       T02978                                 
Symbol
RBM39
Name
(RefSeq) RNA binding motif protein 39
  KO
K13091  RNA-binding protein 23/39
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tup03041]
    102475988 (RBM39)
Spliceosome [BR:tup03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    102475988 (RBM39)
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RBD_DEAH11 RRM_7 POP1_C IHO1
Other DBs
NCBI-GeneID: 102475988
NCBI-ProteinID: XP_006144136
LinkDB
Position
Un
AA seq 530 aa
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcagacgatattgatattgaagcgatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgccaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacggaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaagaaagagatgcaagaacagttttctgcatgcagctg
gcagcaagaattcgacccagggatttggaagagtttttctccacagtaggaaaggttcgt
gatgtgaggatgatttctgatagaaattcaagacgttccaaggggattgcttatgtggag
tttgttgacgttagctcagtgcctctagcaattggattaacgggccaacgagttttggga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aacttacagaagggaagtgctggacctatgaggctttatgtgggctcattgcactttaac
ataactgaagatatgcttcgggggatatttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatcaaaggggtatggatttataacgttctctgac
tctgaatgtgccaaaaaggctttggaacagcttaatggattcgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgaactgacgcttccagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctacaattaatg
gcaagacttgcagaaggtacaggtttgcagattccaccagcggcacagcaagctctacaa
atgagtggttctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgccacacaatgtttccaactgtctaatatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggtgtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgccgcagctattgctgctgtaaatgcactgcatggcaggtggtttgctggtaaaatg
ataacagcagcctatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggtcccaagtagacgatga

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