Tupaia chinensis (Chinese tree shrew): 102476768
Help
Entry
102476768 CDS
T02978
Symbol
LSM2
Name
(RefSeq) LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
tup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102476768 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
102476768 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102476768 (LSM2)
03041 Spliceosome [BR:
tup03041
]
102476768 (LSM2)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102476768 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
102476768 (LSM2)
Spliceosome [BR:
tup03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102476768 (LSM2)
Complex C
U2 snRNP components
102476768 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
102476768
NCBI-ProteinID:
XP_006154354
LinkDB
All DBs
Position
Un
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactccttcttcaagtcccttgtgggcaaggatgtggtggtggaactcaag
aatgacctgagcatctgtggaacccttcattctgtggaccagtatctcaacatcaaactg
actgacatcagtgttacggatcctgagaaataccctcacatgttatcggtgaagaactgc
ttcatccggggctccgtggtccgctatgtgcagctgccagcagatgaggtggacacacag
ttgctacaggatgcagcaaggaaggaagccctgcagcagaaacagtga
DBGET
integrated database retrieval system
