Tupaia chinensis (Chinese tree shrew): 102477277
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Entry
102477277 CDS
T02978
Symbol
PMS2
Name
(RefSeq) PMS1 homolog 2, mismatch repair system component
KO
K10858
DNA mismatch repair protein PMS2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03430
Mismatch repair
tup03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102477277 (PMS2)
03460 Fanconi anemia pathway
102477277 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tup03400
]
102477277 (PMS2)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102477277 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
102477277
NCBI-ProteinID:
XP_006150250
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All DBs
Position
Un
AA seq
892 aa
AA seq
DB search
MGGPEAGPSWELRREVSRSPGVRLGSTLMERAEDPSTELAKAIKPIDRKSVHQICSGQVV
LSLSTAVKELVENSLDAGATSIDLRLKDYGVDFIEVSDNGCGVEEENFEGLTLKHHTSKI
QEFADLTQVETFGFRGEALSSLCALSDITISTYHTSAKVGTRLVFDHNGKITQKTPYPRP
RGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISEGIRVSCTNQLGQGKRQ
PVVCTNGGSSIKENIGSVFGQKQLQSLIPFVQLPPSDSICEEYGLSCFDALHNLFHISGF
ISRCGHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDSECV
DINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLSVNQQPLLDIEGNLIRTHVTDI
ERPLPAKQDNSPSLRTQGEEKRAVSISRLREAFSLRYTTENRSQNPESREPRRNSPKQKR
SMPFASAVSLISGRDWLGSQDEAVGSHKVSGDCVDRDEMEKDSGYSSTSADTEEVPSTPD
MDSHCSSECAVSTPEDRCSQGNVESCEKLPATDHRFSDVEHCVNQEDSGCKFRVSLQPTD
LLSSNTKRFKKEEISSNSDIPHELVNTQNVSVSQVDVAIKINKKIVTLDFSMSSLAKRIK
QLHHQEQQSEDKQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITK
LNEDIFIVDQHATDEKYNFEVLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNG
FDFIIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASR
ACRKSVMIGTALNTNEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDIISQN
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtccggaggcggggccgtcgtgggagctgcggcgggaagtctctcggagtccg
ggagtcaggttgggttccacactgatggagcgagcagaggacccgagtacagaacttgcc
aaggccatcaaacctattgatcggaagtcagtccatcaaatttgttctgggcaggtggtc
ttgagtcttagcactgctgtcaaggagttagtagaaaatagtctggatgctggtgcaaca
agtattgatctgaggcttaaagactatggcgtggatttcattgaagtttcagacaatgga
tgtggggtagaagaagaaaactttgaaggcttaactctgaaacatcatacttctaagatt
caagagtttgctgacctaacacaggttgaaactttcggctttcggggagaagctctgagc
tcactttgtgcattgagtgacataactatttctacctaccacacatctgcaaaggttggg
actcgattggtgtttgatcataatgggaaaatcactcagaaaaccccctacccacgaccc
agagggaccacagtcagtgtgcagcagttattttatacactacctgtgcgccataaggaa
tttcaaaggaatattaaaaaggagtatgccaaaatggtccaggtcttacacgcatactgc
atcatttcagaaggcatccgtgtaagttgtaccaatcagcttggacaaggaaaacgacag
cctgtggtatgcacaaatggaggctccagcataaaggaaaacatcggatctgtgtttggg
cagaagcagttgcaaagcctcattccttttgttcagctgccccctagtgactccatctgt
gaagagtatgggctgagctgttttgatgctctgcataatctgtttcatatctcaggtttc
atttcgcgttgtgggcacggtgtcggaaggagttcaacagacagacaatttttctttatc
aatcggcggccttgtgatccggcaaaggtctccagacttgtgaatgaggtctaccacatg
tataatcgacatcaatatccatttgtcgttcttaatatttctgttgattctgaatgtgtt
gatatcaatgttactccagataaaaggcaaattttactacaagaggagaagcttttgttg
gcagttttaaagacctccttgataggaatgtttgatagtgatgtgaacaaactcagcgtc
aatcaacagccactgttggatattgaaggtaacttaataagaactcatgtgacagatata
gagaggcctctgccagcaaagcaggataattccccatcattaaggacccagggggaagag
aaaagggcagtatccatttccagactgagagaagccttttctcttcgttacacaacagag
aacaggtctcagaacccggagtcacgtgagccgaggcggaactctcctaaacaaaaaaga
agcatgccgtttgccagcgctgtaagtctcatctcaggcagagactggctaggctctcag
gatgaggcagtgggttcccataaggtctctggtgactgtgtggacagagacgaaatggag
aaggactcggggtatagcagtacttcagctgacacagaggaagtacccagcactcctgac
atggacagtcactgcagcagtgagtgtgcagtaagcaccccagaagacaggtgttcacag
gggaatgtggaatcttgtgagaaattacctgcaactgaccatcgtttttcagacgtggaa
cactgtgtaaaccaagaagatagtggatgtaaattcagagtttcacttcagccaactgat
ctcttatcttcaaacacaaagcgttttaaaaaagaagaaatttcttcaaattctgacatt
cctcacgagctggttaatactcagaatgtgtcagtatctcaggttgatgtagctattaaa
attaataagaaaatagtgacacttgacttttctatgagttctttagctaaacgaataaag
cagttacatcaccaagaacagcaaagtgaagacaaacagaattataggaaatttagggca
aaaatttgccctggagaaaaccaagcagcagaagatgaactaagaaaagagataagtaaa
acaatgtttgcagaaatggaaatcattggtcagtttaatttgggatttataataaccaaa
ctgaatgaagatatcttcatagtggaccagcatgctacagatgagaaatacaactttgag
gtgctacaacagcacacagttctccagggtcagaggcttatagcacctcagactctcaac
ttaactgctgtcaatgaggctgttctcatagaaaatctggaaatatttagaaagaatggc
tttgattttatcatcgatgaagatgctccggtcactgaaagggctaaattgatctccttg
ccaaccagtaaaaactggacctttggaccccaggatatagatgaattgatcttcatgcta
agcgacagccctggggtcatgtgccggccctcccgagtcaggcagatgtttgcctccaga
gcctgtcgaaagtctgtgatgatcggaactgctcttaacacaaatgagatgaagaaactc
atcactcacatgggtgagatggaccacccctggaactgtccccatggaaggccaaccatg
agacacattgccaatctggatatcatttctcaaaactga
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