KEGG   Tupaia chinensis (Chinese tree shrew): 102477639
Entry
102477639         CDS       T02978                                 
Symbol
KDM5B
Name
(RefSeq) lysine demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tup01009]
    102477639 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tup03036]
    102477639 (KDM5B)
Enzymes [BR:tup01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102477639 (KDM5B)
Protein phosphatases and associated proteins [BR:tup01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102477639 (KDM5B)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102477639 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like Lipoprotein_20
Other DBs
NCBI-GeneID: 102477639
NCBI-ProteinID: XP_006159410
LinkDB
Position
Un
AA seq 1624 aa
MIDWPLSLILTDCSLLAGRNSIHSKWSIIFGSTXTVGLTPSSGSRPRPRPIRGRGGELGA
EGWGWGWGWDSFSSPWRRRRTAWVSGETGPRPALPLGGPGPLGEFLPPPECPVFEPSWEE
FADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKL
NFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGF
APGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQP
SETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSNVKQES
IEKKDYIVESEKEKPKSRSKKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIP
PLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMV
PTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNL
NNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYG
VPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVIT
FPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKAD
VLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFM
SAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALN
VNEALEAKINKKKSLFNFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGK
RQTRYRSGGGKSPNQLTVNELRQFVTQLYALPCLLSQTPLLKDLLNRVEDFQQHSQKLLS
EEMPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRL
IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSFLKARPRHSLSSLATAVKEIEEIP
AYLPNGAALKDSVQKARDWLQDVEALQAGGRVPVLDTLVELVTRGRSIPVHLNSLPRLES
LVAEVQAWKECAASTFLTENSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKKSTK
LESLSDLERALTESKETASAMATLGEARLREMEALQSLRLANEGKLLSPAQEVEMKVCLC
QKAPATPMIQCELCRDAFHTSCVAVPSAAQGPRIWLCPHCRRSEKPPLEKILPLLASLQR
IRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRLGSGLLLSRWQASAGQVSET
NKVSQPPGTTSFSLPDDWDNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLP
EIQELYQTLLAKPSPAQQTDRSSPVRPSSEKIDCCRGKRDGTNNGLERKLKRRPEREGLS
SERWDRVKKMRTPKKKKIKLSPPKDMNNFKLERERSYELVRSAETHSLPSDTSYSEQEDS
EDEDAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYVCVRCTVKDA
PSRK
NT seq 4875 nt   +upstreamnt  +downstreamnt
atgattgattggcctctgagtctgattctaacagactgttcacttcttgcgggcaggaac
tcgatacatagtaaatggtcaatcatttttggctcaactngaaccgtaggattaactcca
tcctctggctccaggccccggccccgcccgatccgggggcggggcggagagctcggcgca
gagggttgggggtgggggtgggggtgggactctttttcctcgccgtggcggcggaggcgc
acggcgtgggttagcggcgagacgggcccgcgcccggcgctgcctctcgggggcccgggc
ccgctgggcgagttcctgcctccccccgagtgcccggtcttcgagcccagctgggaagag
ttcgcggaccccttcgctttcatccacaagatccggcccatcgccgagcagacggggatc
tgtaaggtgcggccgccgccggactggcagccaccatttgcgtgtgatgtggataaactt
cattttacgccgcgcatccagagattgaatgaattggaggctcagactcgcgtaaaattg
aatttcttggaccagattgccaagtactgggagttacagggaagtaccctgaaaattcca
catgtggagaggaagatcttggacttgtttcagcttaataagttagttgcagaagaaggt
ggatttgcagttgtttgcaaggatagaaaatggaccaaaattgccactaagatgggattt
gctcctggcaaagctgtgggctcccacatcagagggcattatgaacggatcctgaacccc
tacaacttattcctgtctggagacagtttgaggtgtctgcagaagccaaacctgaccaca
gacacaaaggataaggagtacaaaccccacgatatcccccagaggcagtctgtacagcct
tcagaaacttgccccccagcccggcgagcaaaacgcatgagagcggaggccatgaacatt
aaaatagaaccagaagagacaacagaagctagaactcataatctgaggcgtcgaatgggt
tgtccaactccaaaatgtgaaaatgagaaggaaatgaagagtaatgtcaagcaagagtcc
attgagaagaaagattatattgtagaaagtgagaaggaaaagcccaagagtcggtctaag
aaaaccaccaatgctgtggacctgtacgtctgccttctgtgcggcagtggcaatgacgag
gacaggcttctcttgtgtgatggctgtgacgacagttaccacaccttctgcttgatccca
cctctccatgatgttcccaagggggactggcggtgtcctaagtgtttggctcaggaatgt
agtaagccacaagaagcatttggcttcgaacaagcggccagggactacaccctccgtact
tttggagaaatggcagatgcattcaagtctgattacttcaacatgccagtccatatggtt
ccaacggagctggttgagaaggaattttggcgactggtaagcaccattgaagaggatgtc
acagtggaatatggagctgatattgcctcaaaggaatttggcagtggctttcctgtccga
gatggaaaagtcaaactttcaccagaagaggaggaataccttgatagtggctggaatttg
aacaacatgccagtgatggagcagtctgtgcttgcccacattacggccgacatctgtggc
atgaagctcccttggctgtatgtgggaatgtgcttttcttcattctgctggcacatcgaa
gaccactggagctattcaatcaactacctgcactggggtgagccgaaaacctggtatgga
gtcccagggtatgccgccgagcagctagaaaacgtcatgaagaaactcgccccagagctc
tttgtgtcgcagccggatctgctccaccagctcgtcacgatcatgaaccccaacaccctg
atgacgcatgaagtgcctgtttaccgaactaatcagtgtgctggagagtttgtgattaca
tttcctcgagcctaccacagtggttttaaccaaggttttaattttgccgaggctgttaac
ttctgcactgttgattggctgccgttgggccgacagtgtgtggagcattaccgcctgctt
caccgttactgtgtgttttcccatgacgagatgatttgcaagatggcttctaaggctgac
gtactcgatgttgtagtggcttcaactgttcagaaagacatggccattatgattgaggat
gagaaggctttgagggagactgtgcgtaaactgggagtaatcgattcagaaagaatggat
tttgagctgctgccagatgatgaacggcagtgtataaaatgtaaaaccacgtgcttcatg
tctgccatctcctgttcttgtaagcccggcctgcttgtttgcctgcatcatgtgaaagaa
ttgtgttcctgtcctccttataaatataaattgcggtatagatacacgctggatgacctc
taccccatgatgaacgcgttgaagcttcgcgcagaatcttacaatgagtgggccttgaat
gtgaatgaagctctggaggcaaagatcaacaagaagaaaagccttttcaactttaaggct
ttgatcgaagaatccgaaatgaagaaattcccagacaacgatcttctgcgtcacctccgc
ttagtcacgcaggatgcggagaagtgtgcctctgtcgcacagcagttacttaatggcaaa
aggcagacgagataccgatctggtggaggaaagtccccaaatcagctgactgtgaatgag
ctccgacagttcgtgactcagctgtatgctctgccatgccttctcagtcagacgccattg
ctgaaggatctcttgaatcgtgtagaagatttccagcagcatagccagaaactactctcc
gaggaaatgcctagtgctgctgagctgcaggacttgctcgacgtcagctttgaatttgat
gttgaacttccacagcttgctgagatgcgcatccgcttggagcaggcccgttggctggaa
gaagtgcagcaagcttgcctagaccccagctcccttactttagatgatatgagacgtctc
atagatctgggggtggggctggccccatattccgcagtggagaaagctatggcccggctg
caggagctgctcacagtatcagagcactgggatgacaaagccaagagtttccttaaggcc
agaccacggcattcattgagcagccttgctacagcagtgaaggaaatcgaggagatccct
gcttatctgcccaatggcgcggctctgaaagactccgtgcagaaagccagagactggctt
caggatgtagaggccctgcaggctggaggacgtgtgccagtgttggacacactcgtagag
ctcgttacacgaggccgatctatcccagtacatctgaattctttgccaagactggaatca
ctagtagctgaagttcaggcttggaaagaatgtgctgctagtacattcttgactgagaat
tctccatattctctcttggaggtactgtgtcctcgatgcgatattggccttctgggattg
aagaggaagcagagaaagctaaaggagcccttgccaagtgggaagaagaaaagtaccaag
ttagagagtctgagcgacctggagagggctttaactgaaagcaaagagactgcttcagct
atggcaacgcttggggaagctcgcctaagggaaatggaagccttgcagtccctcagactc
gccaatgaagggaaattgctgtcacctgcccaagaggtggagatgaaagtctgcctctgt
cagaaggccccggccacccctatgatccagtgtgaactctgcagggatgctttccacacc
agctgcgtggctgtgcccagcgctgcgcagggccccagaatctggctttgtccccactgt
cggaggtcagagaaacctccgttagagaagattctgcccctgctggcctcgctgcagcga
atccgagttcgccttcctgagggagacgcacttcgatatatgattgaaagaaccgtgaac
tggcaacacagggcccagcagctgctttcgtcagggaatctcaaatttgtgcaagaccga
ctgggctcgggactgttacttagcagatggcaggcctccgcaggacaggtgtccgagaca
aataaggtgtctcagcctcctggcacgacgtccttttccttgcctgatgactgggacaac
aggacctcatatttacactcccccttctctactggacggagctgtatccccctccatggc
atcagtccggaagtgaatgaactgttgatggaagcccagttgctccaggtgtcccttcct
gaaattcaggagctttaccagactctacttgcaaagccaagccctgcccagcagactgac
agaagctcaccagttagaccgagcagtgagaagatcgactgctgccgagggaagcgagac
ggcaccaacaacggtcttgagagaaaactgaagagacgccctgaaagagaaggtctctcc
agcgagaggtgggatcgagtgaaaaaaatgcggacccccaaaaagaagaaaatcaaactg
agcccccccaaggacatgaacaatttcaagttagagagagagcgtagctatgagttagtc
cgttctgccgaaactcactcactgccctcagacacatcctattctgagcaggaggactct
gaggacgaagatgccatctgccccgctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtt
tctccagagatggcagagaaggaagactacgtctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaagtaa

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