Tupaia chinensis (Chinese tree shrew): 102478027
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Entry
102478027 CDS
T02978
Symbol
CHD7
Name
(RefSeq) chromodomain helicase DNA binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tup03036
]
102478027 (CHD7)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102478027 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
102478027
NCBI-ProteinID:
XP_006154829
LinkDB
All DBs
Position
Un
AA seq
3001 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPPTN
QNQTKLTHFDHYNQYEQQKMHLMDQPGRMMSNAPGNGLASPHSQYHTPPVPQVPHGGGGG
GGQMGVYPGMQSERHGQSFVDSGSMWGPRAVQVPDDPSPQIRAPYQQQPPQPQPPQPAPS
GPPAQGHPQHMRQMGSYLARGDFSMQQHGQPQQRMSQFSQGQEGLNQGNPFIATSGPGHL
SHVPPQSPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPPQGAVRPQTLNFSSR
SQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPS
NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP
GSAGIPMEVGSYPNMPHPQPAHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELTGHM
RPNGCPGVGLADPQAIQERLIPGQQHPGQQPPFQPLPTCPPLQPHPGLHHQSSPPHPHHQ
PWAQLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLLKSEDYLPSVEQQPP
QKKKKKKNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAKKDPKE
PKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVN
KGKAEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDA
DAAGRDSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSY
LHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTD
DRGEPVTHYLVKWCSLPYEDSTWERRRDIDQAKIEEFEKLMSREPETERVERPPADDWKK
SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGI
HGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSY
KFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGT
PLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVE
KNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHP
YLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQM
VRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLD
KAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDHILLRRT
HTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDT
PRVRKQTRLYSAVKEDELMEFSDLESDSEEKPCVKPRRPQDKSQGYARSECFRVEKNLLV
YGWGRWTDILSHGRYKRQLSEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQ
TRALVNHSGLSAPVPRGRKGKKVKAQSTQPVVQDADWLASCNPDALFQEDSYRKHLKHHC
NKVLLRVRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLL
IGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGDFDREDEDP
EYKPTRTPFKDEIDEFANSPPEDKEESLEIHATGKHSESSAELGQLYWPNTSTLTTRLRR
LITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFY
RVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPTKPEDE
PPDLSSMIEPITEERASRTLYRIELLRKVREQVLHHPQLGERLKLCQPSLDLPEWWECGR
HDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQSRGAGNMASLNPLAVGFGQTPP
VTSSAHMQDEKVMEQAEGKAEESENLTAKEKSEVKEEEEEAEGGETEASSECETEASSVK
SELKGVEVGADAGSKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNAS
MSTARDETRDGFYMEDGDPSVAQLLHERAFAFSFWPKDRVMINRLDNICEAVLKGKWPVN
RRQMFDFQGLIPGYTPTTVDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALNLS
VPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSST
SNFSSLTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPLKRRRGR
RKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLE
DGTRLVGDDAPKNKDLVDWLKLHPTYTVDVPSYVPKNADVLFSSFQKPKQKRHRCRNPNK
LDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFV
PESMFDRLLTGPVVRGEGASRRGRRPKSEIARAAAAAAVASTSGINPLLVNSLFAGMDLT
SLQNLQNLQSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPCGFGLGGLL
NSPLSAAAGNATTAASQGEPEDGAAKVEEKGTENEDENKDSEKSTDAVSATDSANGSVGA
ATAPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSGEE
KAADKAEGGPFKDGEHLEGSDAEESLDKTAESSLLEDEIAQGEELDSLDGGDEIENHEND
E
NT seq
9006 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggtgaggatgggaatattttcagtgaaggc
ctcgaaggcctcggagaatgtggttaccctgaaaacccagtaaatcccatgggtcagcag
atgccgatagaccaaggctttgcctctctgcagccatcccttcaccacccccccacgaat
cagaatcaaaccaagctgacccatttcgatcactataaccagtacgagcagcagaagatg
catctgatggatcagcctggcaggatgatgagcaacgcccccgggaacggactcgcgtct
ccgcactcgcagtaccacacccctcccgtccctcaggtgccccacggcggcggcggcggc
ggcggtcagatgggcgtctaccctggcatgcagagcgaaaggcacgggcagtccttcgtg
gacagcggctccatgtggggcccccgggctgtccaggtcccagacgatccgagcccccag
atccgagccccctaccagcagcagccgccgcagccccagcccccgcagccggctccgtcg
gggccccctgcgcagggccacccgcagcacatgcggcagatgggcagctacctggcacgt
ggggatttctccatgcagcagcacgggcagccgcagcagaggatgagccagttttcccaa
ggtcaagagggcctcaatcagggaaaccctttcatcgccacctcaggacccggccacctg
tcccacgtgcccccgcagagccccagcatggcaccttccttgcgccactcggtgcagcag
ttccatcaccaccccccgactgctctccacggagaatccgtcgcccacagccccaggttc
tccccgaatcctcccccacaaggggctgttaggccacaaacccttaacttcagttctcgg
agccagacagtcccctctcctactataaacaactcagggcagtactctcgatatccttac
agtaacctgaatcagggattagttaacaatacagggatgaatcagaatttaggccttaca
aataatactccaatgaatcagtccgtaccaagataccccaatgctgtaggattcccgtcg
aacagtggtcaaggactaatgcaccagcagcccatccaccccagcggctcacttaaccaa
atgaacacacaaactatgcatccttcacagcctcagggaacttacgcctctccacctccc
atgtcacccatgaaagcaatgagtaacccagcaggcactcctcctccgcaagtcaggccc
ggaagtgctgggataccaatggaagttggcagttatccaaatatgccccaccctcagccg
gctcaccagccccctggcgccatgggaatcggacagaggaatatgggcccccgaaacatg
cagcagtctcgtccgttcatgggcatgtcctcggcaccgagggagttgaccgggcacatg
agaccaaatggttgtcctggcgttggcctcgcagatccacaagccatccaggagcgactg
attcctggccagcagcaccctggccagcagccgccgtttcagccgttgccaacctgccct
ccgctgcagccccacccgggcttgcaccaccagtcttcacccccacaccctcatcaccag
ccttgggcacagctccacccatcaccccagaacaccccgcagaaagtgcctgtgcatcag
cattctccatcggagccctttctagagaagccagtgccggatatgactcaggttagcgga
ccgaatgctcagctcctcaagagtgaggattacctgccgtcagtggaacagcagccaccg
cagaagaagaagaagaagaaaaacaaccacatcgtcgcagaggatcccagtaagagtttt
ggtaaagatgacttcccaggtggggttgataaccaagaactaaataggaactctctagat
gggtcccaagaagaaaaaaagaaaaagaaaaggccgaaggcaaaaaaagatccgaaggaa
ccgaaagaacccaaggagaaaaaagagcccaaggaacccaagaccccgaaagcccctaag
attcccaaagagccaaaggaaaagaaagcaaaaactgccacgccaaaacccaaatccagc
aaaaagtcaagtaataagaaacccgattcagaagcaagtgctttgaagaaaaaggtcaac
aagggaaaagcagaaggttctgaaaattcagacttagacaaaacgcccccaccatctcct
cctcctgaagaagacgaggacccaggtgttcagaagagacggtccagcaggcaggtgaag
agaaagcgatataccgaagacttggagttcaagatttccgatgaggaggcagatgatgca
gacgctgctgggagagactcgccctccaacacctcgcagtcggagcagcaggaatctgtt
gatgcagaaggcccagtggtagagaagatcatgagcagccgttcagtaaagaagcagaag
gaatctggagaggaggtagaagttgaggaattctatgtgaaatacaaaaacttctcttac
ctgcattgccagtgggcatccgtagaagacctggaaaaagataagagaattcagcaaaag
attaaaagatttaaggcaaagcagggccagaacaaattcctttcagagattgaggatgag
ctttttaatccagattatgtggaggttgaccggataatggactttgcacgtagcacagat
gaccggggagagcctgtgactcactatctggtgaagtggtgctcgcttccttacgaagac
agcacctgggagcggaggcgggacatcgatcaagccaagatcgaagagttcgagaaactg
atgtccagggagccggaaacagagcgtgtggagcgacctcccgctgatgattggaagaaa
tcggagagttccagggagtataaaaacaataacaaactcagggaataccagttggaggga
gtaaactggctacttttcaattggtacaacatgcgaaactgcattttagcagatgaaatg
ggtttgggaaaaactatccagtccattacatttctctatgagatatatttgaaaggaatc
catggcccttttttagtgattgccccattgtccacaatccccaactgggaaagggaattc
cgaacctggacggagttgaacgtggttgtgtatcatgggagtcaagctagtcgtcggacc
attcagttgtatgaaatgtacttcaaagatccccagggtcgcgtgataaaggggtcgtat
aagttccacgccatcatcactacgtttgagatgattctgaccgactgtcccgagctgcgg
aacatcccgtggcgctgcgtggtcatcgatgaagcccacaggctgaagaacaggaactgc
aagctgctggaggggctcaagatgatggacctggaacacaaagtgctgctgacggggacc
ccgctccagaacaccgtggaagagctcttcagcctgcttcacttcctggaaccgagtcgc
ttcccttccgaaaccacctttatgcaagaatttggtgatctgaaaacggaagagcaggtg
caaaaacttcaggctattctaaagccaatgatgttgagacgtctcaaagaggatgtagaa
aagaacttggcccccaaagaagaaactattattgaagttgagctaacaaacattcagaag
aaatattaccgagccatccttgagaagaattttacatttctttccaaaggtggcggacaa
gctaatgtacctaaccttttaaacactatgatggagttacgaaagtgctgcaatcatcca
taccttatcaatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgca
gagtctccagattttcagctccaggcaatgatccaggctgctggcaagctagtgctgatt
gacaagctgctgccaaaactgaaggctggtggccacagggtgcttatcttctcccagatg
gtgcgctgcttggacatcctggaagactacctcattcagagacggtacccgtacgagagg
atcgacggccgagtaagaggcaacctccgccaggcagctatcgacaggttctctaagccc
gattccgataggtttgttttcctcctgtgcacacgggcaggaggcttaggcattaatctc
acagctgcagacacctgcatcatctttgattcagactggaatccccaaaatgacctccag
gctcaggctagatgtcacagaataggacagagcaaatccgtgaaaatctacaggctcatt
acaagaaactcctatgagagggagatgttcgacaaggccagtttgaagctcggtctggac
aaagctgtcctgcagtctatgagtggaagagagaacgccaccaacggggtacaacagctt
tccaagaaagagatagaggatcttctccgcaaaggggcctacggcgcgctcatggatgag
gaggacgaaggctcgaagttctgtgaagaggacatcgatcacattctcctgcggcgaacc
cacaccatcaccatcgagtctgaagggaaaggctccacatttgcgaaggccagttttgtt
gcatctggaaatagaacagatatttccttggatgatccaaatttctggcaaaagtgggca
aagaaggctgaactggatattgatgccttaaatgggaggaataacctggttattgacact
ccaagagtgaggaagcagaccaggctgtacagtgcagtaaaggaagatgagctgatggag
ttttcagacttggaaagtgattccgaggaaaagccttgtgtaaagccacggcgcccccag
gataagtcacagggctatgcaaggagcgagtgtttcagagtggagaagaatctgcttgtc
tatggttggggtcggtggacagacatcctttcccacggacgctacaagcgtcagctctcc
gagcaagacgtggagaccatctgcaggaccatcctggtgtactgcctcaaccattacaaa
ggggacgagaacatcaaaagtttcatctgggatctgatcacgcccacggccgatggccag
acccgtgccttggtcaaccattctggtttatcagccccagtgccgaggggaaggaaagga
aagaaagtgaaagcccagagcacgcagccggtggtgcaggatgctgactggctggccagc
tgcaacccagacgccctgttccaggaggacagctacaggaagcacctgaagcaccactgc
aacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaagaagttataggagac
caggcagataagatcttagagggtgctgactcaagcgaggccgacgtgtggatccctgag
ccattccatgctgaggttcctacagactggtgggataaggaggcagataagtccctcttg
atcggagtgttcaaacatggctatgagaagtacaactccatgcgagctgaccctgcgctg
tgctttctggaacgagtcggtatgcccgatgccaaggccatagctgccgagcagagagga
acagacatgctagcagatggcggtgacgggggagactttgatagagaagatgaagaccca
gaatataaaccaaccagaacgccattcaaggatgaaatagatgaatttgccaattctcct
ccggaggacaaggaagagtccctggaaatacatgccacaggcaagcacagtgagagcagt
gctgagttaggccaactctactggcccaacacttcaaccctgactacacgtctgcgccgg
ctcattactgcctatcagcgcagctataaaaggcagcaaatgaggcaagaggccctaatg
aagactgaccggcgcagacggcggcctcgggaggaagtgcgagcgctagaagcggaaagg
gaagctattatatctgagaaacggcagaagtggacgagaagagaagaggctgatttttac
cgtgtggtttccacttttggggttattttcgaccctgcgaaacagcagtttgactggaac
caatttcgagcctttgccagacttgacaaaaagtctgacgagagtttggagaaatacttc
agttgctttgtggctatgtgtcgccgtgtgtgtagaatgcccaccaagccagaggatgaa
ccccccgacctgtcctccatgattgagcccatcacggaggagcgcgcctctaggacgctg
taccgcatcgagctgctgcggaaggtccgcgagcaggttcttcatcacccccagctgggc
gagaggctgaagctctgccagcccagcctggatttgcccgagtggtgggagtgtgggagg
cacgaccgagacctgctggtgggcgccgccaagcacggcgtcagtcggacagactaccac
atcctcaacgaccccgagttgtccttcctggacgcgcacaaaaacttcgctcagagcaga
ggggctggaaacatggcttccttgaaccccctggcagttggatttggccagactcctccc
gtcacctcatctgctcacatgcaagatgaaaaggtgatggaacaagccgaaggcaaagcg
gaggagtctgagaacctgactgccaaagagaaatccgaggtgaaagaagaggaggaagaa
gccgagggcggggagacggaggccagctctgaatgcgagacggaggccagctctgtaaaa
agcgagctgaaaggcgtggaggtcggcgcggacgctgggtccaagtctatctcagagaaa
ggttctgaggaggatgaggaagaaaagctggaggatgacgataagtcagaggagtcttcc
cagcctgaagcaggagctgtctctagagggaagaattttgatgaagaaagcaatgcttct
atgagcactgctagggatgaaacccgagatggattctacatggaggatggagatccttca
gtagctcagctccttcatgaaagagcatttgccttctcgttttggcccaaggatagagta
atgataaaccgattagacaacatctgtgaagcggtgttgaaaggcaaatggccagtaaac
aggcgccagatgtttgatttccagggcctcatccctggttacacacccaccaccgtggac
agtcccttgcagaagaggagctttgctgagctctccatggtcggccaggccagcattagt
gggagtgaggacctcaccacttctccccagttgtcgaaggaagatgccctcaatctctct
gtccctcgccagcgaaggaggagaaggagaaaaattgaaattgaggccgagagagctgcc
aagagacgcaatctcatggagatggttgcccagcttcgagagtctcaggtggtctcagaa
aatggacaagaaaaagttgtggatttatcaaaggcctcaagagaggcaacaagttctacc
tcaaatttttcatctcttacttcaaagtttatcttgcctaatgtctcaaccccggtgtct
gatgcctttaagactcagatggagctgctccaagcaggcctttcccgcacacccacaagg
catctgcttaatggctccctagtggatggagagccccccctgaagaggaggcggggaagg
aggaaaaacgtggagggccttgatctgctttttatgagccacaaacggacgtcattgagt
gcagaggatgctgaggtgaccaaagcttttgaagaagatatagagaccccaccaacaaga
aacattccttctcccggacagctggaccccgacacgcggatccctgttataaatctcgaa
gatgggactaggctggtgggggacgatgctcctaaaaacaaggatctagttgactggctg
aagctgcatcccacctacaccgttgacgtgccaagttatgtaccaaagaatgcagacgtg
ctgttttcctcgtttcagaaaccgaaacagaaacgacatagatgtcgaaaccctaataaa
ttggatataaacactttgacaggagaagaaagggtgcctgttgtcaataaacgaaatgga
aagaagatgggtggagctatggcacctccaatgaaggatctgcccaggtggctggaagaa
aaccctgaatttgcagtggctccagactggactgatatagttaagcagtctggtttcgtg
cccgagtcgatgtttgaccgccttctcactggacctgtggtgaggggagagggagcgagc
cggagaggaaggaggcccaagagcgaaatcgcccgagcggccgccgccgccgcggtggcc
tccacgtcggggatcaaccctctgctggtgaacagcctgttcgctggcatggacctgacg
agccttcagaacctccagaatctccagtctctccagctggcaggtctcatgggcttccct
ccaggactggcgacagctgccaccgccggaggcgacgcgaagaaccctgccgccgtgctg
cccctgatgctgccgggcatggcgggcctgccctgcgggttcgggctgggcgggctgctc
aacagccccctctccgctgctgctggaaacgccactactgctgcgagtcagggcgagccc
gaagacggcgccgccaaggtggaggagaaaggaaccgagaacgaggacgagaacaaggac
tccgagaaaagcacagatgctgtttcggctactgactctgccaatggatctgttggtgct
gctactgccccggccggattgccctccaacccgctcgccttcaaccccttcctgctgtcc
accatggcgccgggcctcttctacccatccatgtttctacctccaggactggggggattg
acgctgcctgggttcccggcgttggcaggacttcagaacgccgtgggctccggtgaggaa
aaggctgctgacaaggccgagggcggcccctttaaagatggagagcacctggaaggcagc
gacgcggaggagagcctggacaagacggcagagtcctccctcttggaggacgaaatagca
cagggtgaagagctagactcactggacgggggggatgaaatagaaaaccatgaaaatgat
gaataa
DBGET
integrated database retrieval system
