KEGG   Tupaia chinensis (Chinese tree shrew): 102478065
Entry
102478065         CDS       T02978                                 
Symbol
COL6A5
Name
(RefSeq) collagen type VI alpha 5 chain
  KO
K06238  collagen type VI alpha
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04151  PI3K-Akt signaling pathway
tup04510  Focal adhesion
tup04512  ECM-receptor interaction
tup04820  Cytoskeleton in muscle cells
tup04974  Protein digestion and absorption
tup05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102478065 (COL6A5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102478065 (COL6A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102478065 (COL6A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102478065 (COL6A5)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102478065 (COL6A5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102478065 (COL6A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tup04147]
    102478065 (COL6A5)
   00536 Glycosaminoglycan binding proteins [BR:tup00536]
    102478065 (COL6A5)
Exosome [BR:tup04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102478065 (COL6A5)
Glycosaminoglycan binding proteins [BR:tup00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102478065 (COL6A5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102478065 (COL6A5)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 VWA_CoxE vWA_SIBA-E
Other DBs
NCBI-GeneID: 102478065
NCBI-ProteinID: XP_006158577
LinkDB
Position
Un
AA seq 2612 aa
MKMLLIIFVVVLWTETLEDQSPEPGPQYADVVFLVDSSDHLGVKSFPFVKTFITRMISSL
PIEASKYRVALARYSDKLYHEFHLNTFKSRNPMLNHLKKNFRFIGGSLRVGNALREAHST
YFSAPANGRDKKLFPPVLVVLASAESEDDVEEAAKALRKDGVKIVSVGIQKAPEENLRAM
ATAQFHYSLRTARDLSTFSQNMTQILGEVTRHREGAIDADVEAPAPTSCEKDSLADVVFL
VDESLGAGQSLQSVQSFLENITNSMDVQASCMRLALMSYGEHATTISSLRASTARSEFLP
QIRRLSLQPGRSHAGAALEKMRREVFSEAGGSRRAQGVPQIAVLVTHRPSDDEVREAALS
LRLQDVTVFAMGIQGANHSHLEEIVSYPPGQTVSMLQSYADLETYSKNFLKKIRNEIWSQ
VSTRSEQVELEKTGSIDYKEADIYFLIDGSSSIQRRQFEEIRAFLLEVVAMFTIGPDKVR
VGVVQYSHKTGVEFGVAAYSNAVDVRRAVLNIKQLQGGTYTGKALDFVLPIMREGRKDRA
GEVPTFLIVLTDGKSNDTVLGPAERVRAERFXDAVGIGDADRQQLQQIAGKEERVNFGPN
FDSLKSIKNEVVRSICAEKGCEDVKADIMFLVDSSGSIGHDNFGKMKAFMKNLLAKIQIG
ADKTQIGVVQFSDATKEEFQLNKYITQTEIGDAIDRMSLIGANTLTGSAITLMEPYFGPL
KGARLGVKKFLILITDGEAQDHVKEPARALRDQGVTIFSVGVYGANRTQLEEISGDGSLV
FHVENFDHLKAIESKLVFLMCALHDCKRIQLLDVVFVLDHSGSISPEQQESMVNLTVHLV
NKADVGRDRVQFGALEYSDKPETLFYLNTYPNRAGIVENLRRRRDTGGNTYTARALEHAD
FLFREEHGSRIKQNVRQMLIVITDGESHDRERLHETALALREKGGXXXXXXXXGKANQEE
LEAMAGDKNNTIHVDNFDKLKDVYLPLQESMCTNAQEVCNLQEADVIFLCDGSNLVSDSQ
FVTMTTFLLDLLDNFDIQSQRMKIGMAQFGGLYREIVELENSLTKAQWKTRIQKVTKSNG
LPRIDFALKHVSDMFDPSVGGRRNAGVPQTLVVITSGDPRYNVESAVKTLRELGICVLVL
GIGDVHKERLLPITGNSEKVITFQDFNKLNNVDVKKRVVREICQSCGKTNCFVDVVVGFD
LSTHRRGQPLFQGHPRLESYLPGILEGITSLRGVSCGAGSDTQVSLAFKVNDDQGFPSKF
QIYQKAIFDSLLQVNVSGPTHLNAQFLRSLWDTFEDKSASRGQVLLIFSDGLQEETLATL
EDQSDRLREAGLDALLVVSLSTPAHDDFASFEFGKGFDYRTHLTIGMRDLGQLLSQYLGN
IAERTCCCTFCKCSGTPGFQGIRGQQALKGSSGLKGSRGHRGEDGDPGRRGETGPQGGKG
TVGCPGERGLKGARGFPGDKGELGDNGLDGLGGEEGFRGFPGKKGEKGDSGSQGSPGSRG
PPGDYGEKGFPGDPGDPGPNGDIRGQKGAKGEQGRQGRTGQEGPPGSPSPRGIRGREGQR
GVPGASGEPGTPGPQGTPGAEGLQGPQGLRGSPGRKGEQGSQGPKGPQGSPGPVGAAGSP
GRPGLEGRKGEPGMPGDPGPAGPAGQRGRQGDYGIPGYGQMGRKGVKGPRGFPGDAGQKG
DVGEPGIPGGPGPKGFRGLTLTVGLKGEQGSPGLQGPPGHRGTKGMAGQPVYSQCDLIRF
LRGHIACWEDKCPVYPTELVFALDQSSGVTKQRFDETKDIVTSIVNDLNVRENNCPVGAR
VAVISYDSGTSYLIRWSDYHSKKQLLQLLSQIKYQTPTEARDIGNAMRFVARHMFKRTYA
GASVRRVAVFFSNGEAASKSSVLTATMEFSALDIAPAVFAFNERGFLDEAFGFDNTGTFQ
VIPVPPHGAHEPLERLRSCTLCYDKCFPNACAKEIFLPANPYMDVAFLLDNSQNIANDDF
KTMKALVSSVIDNFDIASDPLISKTGDRIALLSYSSWDGSRRKKSTVKTEFDFTTYDSQI
LMKSHIQRSLQQLGGEATIDHALLWTMEKLFSETPNLRKHKVIFVVSAGEIHGRMEFLKK
IALRAKCQGYAIFVISLGSAREDDMEELASHPQDHHLIQLGRIHKPDLDYIVKFLKPFVY
SVRRGFNQYPPLVLENACRRLSPEGEDDGTGGLQSVAESHEISSGENSFMDQEFSYGRDS
SFILKDGGSDHLVYLPNQMFEPQKLVINYEKDQESAEIASLTSGNDNYGQEEERVLTSVP
GDASLQEYYMDVAFLIDASRRVGNDEFMDVKAFVTSVLDYFHIAPDPLTSRLGDRVAVLT
YSPEGYLPQSEECPVYLEFDLVTYNSVYQMKGHLKDSLQQLNGDVFIGHALQWTIDNVFV
GTPNLRKNKVIFLISAGETNPLDKEVLRNVSLRAKCQGYSIFVFSFGPLHNEKELEALAS
QPLDHHLVQLGRTHKPDVDYIIRFVKPFVHSVRRAINKYPPKELRTKCVNITSPDPEDTN
TENTILLIPEVYEIQTEDGELSGEPGPQDQHFFALGSGQSTDPGVATDLIQKLYMLFSAG
ELMVRDREESHSEEIAAQENDRHGRKDCEDMR
NT seq 7839 nt   +upstreamnt  +downstreamnt
atgaagatgctgctaatcatattcgttgtagtcctgtggaccgaaacgctggaagatcag
agcccagaaccaggcccgcagtacgcagatgtcgtgtttctggtggacagctctgaccac
ctgggagtgaagtccttcccgtttgtgaaaaccttcatcaccaggatgatcagcagtctc
cccatagaggccagcaagtaccgggtggccctggcccggtacagcgacaagctctaccac
gaattccacctgaacaccttcaagagcaggaaccccatgctgaaccacctcaagaagaac
ttcaggttcattggcgggtccctgcgggtcggaaacgccctccgggaggcgcacagcacc
tacttctctgcgcccgccaatgggagagacaagaagctgttccccccagtcctggtggtc
ctggcttccgcggagtccgaggacgatgtggaagaggctgcaaaggccctgcggaaagac
ggggtgaaaatcgtctccgtggggatccagaaagcgcctgaggaaaacctgagggccatg
gccacggctcagtttcactacagccttcggacggccagagacctgagcacgttttcccag
aacatgacccagatcctcggggaggtgacgcggcaccgggagggagccatcgacgcggac
gtggaagctcccgcccccacatcttgtgagaaggactcgctggccgacgtcgtgttcctg
gtggacgagtccctcggggccgggcagagcttgcagagtgtgcagagcttcctggagaac
atcaccaactccatggacgtgcaggccagctgcatgcggctcgcgctcatgagctacggc
gagcacgccacaaccatctcttcgctgagggccagcacggcccggtccgagtttctgccc
cagatccggaggctttccctccagcctgggagatcccacgccggggctgccctggagaag
atgaggagagaggtcttctcggaggccgggggcagccggagggcacagggggtgcctcag
atcgcagtcctcgtcacgcacaggccctcggatgacgaggtgcgcgaggccgcgctgagc
cttcggctgcaggacgtcactgtgttcgccatgggcatccagggggccaaccactcccac
ctagaagagatagtgtcttaccccccggggcagactgtgtctatgctgcagtcgtacgca
gacctggagacttacagcaagaacttcctgaaaaagatccggaatgaaatatggtctcaa
gtctcgactcgctcggaacaggtggaactcgaaaaaacaggtagtattgattataaagag
gctgatatctacttcctcatcgacggctcgagcagcatccagagaaggcagttcgaggaa
atcagggcgttcctgctggaggtggtagcgatgtttaccatcggcccagacaaagtccga
gttggcgtggtgcagtactcacacaagacgggggtggaattcggtgtcgctgcctattcc
aacgccgtcgacgtgagacgggcagtcttgaacatcaagcagctgcaaggtggcacgtac
acggggaaagcgctggacttcgtcctgcctataatgagggaggggaggaaggaccgggcc
ggcgaggttcccactttcctcatcgtgctgacggacgggaagtccaacgacacggtcctg
ggacccgcggagagagtgagggcggagcggttcnncgacgccgtgggcattggggacgcc
gatcggcagcagctgcagcagattgctggcaaagaagaaagggtgaacttcgggccgaat
tttgattctttaaaaagcataaaaaatgaagttgttcgcagcatctgtgctgagaaaggc
tgtgaagacgtgaaggctgacatcatgtttctggtggacagttcgggcagtataggacat
gacaattttgggaaaatgaaagccttcatgaagaacttattagctaagattcagattggt
gccgacaaaacccagattggcgttgtgcagtttagtgatgccactaaggaagagttccag
cttaacaaatatattacacagacagagattggcgacgcgatagacaggatgtcactcatc
ggtgcaaacactttgaccggcagtgcgattaccctgatggaaccatacttcggccccctc
aagggggcccgtcttggagtcaaaaagtttctcatcctcatcacggatggagaagcacag
gaccacgtgaaggagcctgcaagagctctccgggaccagggtgtgaccatcttctctgtg
ggcgtgtatggcgccaacaggactcagctggaagagatcagtggggacggcagcctcgtt
ttccacgtcgagaactttgaccatctgaaggccatagaaagcaaactcgtcttcctcatg
tgcgctctccatgactgtaagaggattcagctgctggacgtggtgttcgtgctggatcat
tccggcagcatcagcccggagcaacaggaaagcatggtcaacctgactgtccacctggtg
aacaaagcggacgtgggcagggaccgagtccagtttggggcccttgagtactctgacaag
cctgagactcttttctacctcaacacgtacccaaacagagcggggatcgtggagaacttg
aggaggcgcagggacaccggcgggaacacctacacggccagggcgctggagcacgcggac
ttcctgttccgagaggagcatggcagccggatcaagcaaaacgtgaggcagatgctcatc
gtcatcaccgacggggagtcccacgaccgggagcggctccacgagacggcgctggcccta
agagagaagggcggcannnnnnnnnnnnnnnnnnnnnnngggaaggccaaccaggaagaa
ctcgaggcgatggcgggagacaagaacaacaccatccacgtggataattttgacaaactg
aaggacgtttacctgcctctacaagaaagcatgtgcaccaatgcacaagaggtctgtaac
cttcaagaagcagacgtgattttcctttgtgacggctctaacctggtttctgattcccag
ttcgttaccatgacaactttcttgttagacttacttgataattttgacattcagtctcag
aggatgaagattgggatggctcagtttgggggcctgtacagggaaatcgttgagttggaa
aactctctgactaaagcccagtggaagacgcgcattcagaaggtcaccaagagcaacggg
cttccgcgcatcgactttgcccttaagcacgtgagcgacatgtttgacccctccgtcggc
gggagaagaaatgccggggtccctcagacgctggtcgtcatcacgtctggggacccccgt
tacaatgtagagagtgctgtaaagaccctcagagagcttgggatctgtgtcctggttttg
ggcataggagatgttcacaaggaacggcttttgcccataacaggcaattctgaaaaagta
atcacttttcaagactttaacaaattaaataacgtggatgtgaaaaaaagagtggttcgc
gaaatttgccagagctgcggaaaaaccaattgcttcgtggatgtagtggttgggttcgac
ctttccacacaccggcgtgggcagcctctgttccagggccacccccggctggaatcgtac
ctcccaggaatcttggagggtatcacctccctcagaggcgtgagctgtggtgcaggctca
gacacgcaagtgagtttggcctttaaggtgaatgacgatcaaggattcccttccaagttt
cagatctaccagaaagcgatatttgacagcttgctgcaagtcaacgtcagtgggccaact
cacctgaacgcgcagttcttgcggtcactgtgggacacatttgaggataaatctgcatcc
cggggtcaggtgctgctaatcttttcagacggtctccaggaggagaccctcgcgacgctt
gaagatcagtcagacaggctcagagaagcaggactcgatgctctgttggtggtgtccctg
agcacacctgctcacgatgactttgccagctttgaattcggaaaaggatttgattacagg
actcacctgaccattggaatgagggatctgggccaactgctgtcacagtacctggggaac
attgcagaaaggacctgctgttgtacattttgcaagtgttccgggaccccgggatttcaa
gggatccgaggacaacaagccttgaagggttcttcaggtcttaaaggcagcagaggacac
aggggagaggacggggaccctggaagacgaggagagactgggcctcaaggaggaaaaggg
actgtggggtgtcccggagagcgaggcctaaagggagccagaggatttcctggagataag
ggagagcttggagacaacgggcttgatggcctcggtggggaggagggctttcgtgggttt
cctggaaaaaaaggagaaaaaggtgattcaggatctcagggcagcccagggtccagaggc
cctccgggggactatggcgagaagggcttcccaggagatcccggtgatccaggaccaaac
ggtgacatcagaggacagaagggcgccaaaggggaacaaggaagacagggcaggactgga
caggaagggccaccaggcagtcccagtccccgaggaatcaggggtagagagggccagagg
ggagtcccaggtgcctcaggggagccaggaacccctggaccacaaggtacacccggagct
gaagggttacaaggcccacaggggctacgtggaagtcctggcaggaaaggagaacaagga
agccaggggcccaaaggacctcagggttctcctgggccagtgggagcggcggggagccct
ggaagacccgggcttgagggcaggaagggagaacctgggatgcctggggacccagggcca
gcggggccagctggacagcgaggaagacagggagattatggcatcccaggctatgggcag
atgggacgaaaaggagtaaagggtccaagaggattcccgggagacgcgggccagaagggt
gatgttggtgagcctggaatccccggagggcccggacccaaagggtttaggggactaacg
ctcaccgtaggcttgaaaggtgagcagggctctccgggactccaaggccctcctggacac
aggggcactaaaggcatggctgggcagcctgtgtactcgcaatgtgatctgatccggttc
ttgaggggccatatcgcttgctgggaagacaagtgtccagtgtatccaacagagttggta
ttcgccctagaccagtcctctggtgtcacaaagcagcgatttgatgagacaaaggacatc
gtcacatccatcgtcaatgacctcaacgtcagggagaacaactgtcctgtgggagccagg
gttgccgtcatttcctacgattcgggcaccagctatcttatccgttggtctgactaccac
agcaagaaacaactcctccagcttctttcccaaataaagtatcaaacccccacggaggct
cgagacattggtaacgcaatgcggtttgtggcccgccacatgttcaagcgcacgtacgca
ggagccagcgtgaggagagttgccgtgtttttcagcaacggagaagcagccagtaagtcg
tccgtcctcacagccaccatggagtttagtgccctggatatcgctccggcagtctttgct
ttcaatgaaagagggttcctggatgaagcttttgggttcgacaacaccggaacatttcaa
gtgattccagttcctccacatggggcacatgagccattggaaagacttcgaagctgtaca
ctctgctatgataaatgttttccaaatgcttgtgctaaagagattttcttgcctgcaaat
ccatacatggatgtagcctttctcttagacaattctcagaatatagcaaatgatgatttt
aaaaccatgaaagccttggtgagctcagtgattgacaacttcgacatcgcttcagaccct
ttaatctccaaaactggtgatagaattgccttgttgagctattcctcttgggacggttcc
aggagaaagaagagtacagtaaaaacagagttcgactttacgacttatgacagccaaatc
ctaatgaaaagccatatccagaggtccctccaacagctcggtggagaagccaccatcgac
catgcccttctgtggaccatggagaaactcttctcggaaacacccaacctaagaaagcac
aaggtcatctttgtagtctcagctggagaaattcatgggagaatggagttcctaaagaag
atagctttgagggccaagtgtcaaggttatgccatatttgtgatttctctgggctctgca
cgtgaggatgacatggaggagttagccagccacccacaggatcatcatttgatacagctt
gggagaatccataaaccagatctggattatattgtaaagttcttgaagccatttgtatat
tcagtcagaagaggatttaatcagtacccgccactggtacttgagaacgcttgtagacgc
ctgagtccagaaggagaggatgatggaaccggcggtctccaatctgttgctgagtcgcat
gaaatttcatcaggcgagaacagcttcatggaccaggaattcagttatgggagagactca
tcttttattctgaaggacggtggaagtgatcatttggtttacctcccaaatcaaatgttt
gagccacagaaattagtgattaattatgaaaaagatcaagaatctgcagaaattgcaagt
ctcacttctgggaatgacaattatggccaagaagaagaacgagttcttacttctgtccct
ggagatgcctctcttcaagaatattacatggatgtcgctttcctcatagatgcttcccga
agagtaggaaacgatgagttcatggacgtgaaagcttttgtaacttcagtgcttgattat
tttcacatcgccccagatccgctgacctcccgcttgggagatagagtggctgtcttgacc
tactctcccgaaggctatctgccccagtctgaagaatgtcctgtctacctggaatttgat
ttggttacttataacagcgtataccaaatgaaaggtcatctgaaagactccctccagcag
ctcaacggggatgtttttattggccacgctctgcagtggacgattgacaatgtctttgta
ggaacacccaacctgaggaaaaacaaagttatctttctaatatctgctggtgaaaccaac
cctttagacaaggaagtcttaaggaatgtgtctttgagagccaagtgtcaaggctactct
atatttgtgttttcctttggtcctctgcacaacgagaaggagttggaggcattagccagc
cagcccctggaccatcacttagttcagcttggccggactcacaagcccgatgtggactac
atcatcaggtttgtcaagccgtttgtccattcggttagacgcgccatcaataaatatccc
cccaaagagctgagaaccaagtgtgttaacatcacgtctcccgacccagaggacacgaac
acagaaaacactatactactcatccccgaggtgtacgaaatacagaccgaggacggtgag
ctgtctggcgagcctgggccccaggaccaacacttctttgccttagggagtggccagagt
actgaccctggagtggctactgatttgatccagaagttatacatgctcttttctgcgggg
gagttgatggtgagagacagggaagagtcacattcagaagaaatcgcagctcaagagaac
gacagacacggtagaaaagattgtgaagacatgaggtga

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