Tupaia chinensis (Chinese tree shrew): 102478217
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Entry
102478217 CDS
T02978
Symbol
CDH20
Name
(RefSeq) cadherin 20
KO
K06807
cadherin 20, type 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tup04515
]
102478217 (CDH20)
Cell adhesion molecules [BR:
tup04515
]
Cadherins
Major cadherins
102478217 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102478217
NCBI-ProteinID:
XP_006157339
LinkDB
All DBs
Position
Un
AA seq
830 aa
AA seq
DB search
MWTSGRMRNAKSWLGLGMSLYLWGLMDLTTTVLSSTPTSRGELETLLSDKPQSHQRTKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVFAKD
LDEGINAEMKYTIIDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGANPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPVFEPGFYFVEVPEDVAIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVPV
TIKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANN
PNFTIRDNQDNTARILTRRSGFRQQEQSLFYLPILIADSGQPVLSSTGTLTIQVCSCDDD
GHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYILDDEENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREGKKRGAAPETRQDMLPEIESLSRYVPQTCAVH
STVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLHSAASDSEQSFDFLTE
WGGPLPLHLRVLLAHQTIETDLQKKATEKLFLNEMNLLVVGYLLTLLRQG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttctggtagaatgagaaatgcaaagagctggcttggactcggcatgtccttg
tacctctggggattgatggaccttacaaccaccgttctctccagcaccccaacatcaaga
ggtgaattagaaacgctcctatcagataagccacagtcacaccaacgaaccaagaggagc
tgggtttggaaccagtttttcgttttggaagagtatactggaaccgaccctttgtatgtc
ggcaagcttcattcagatatggacaggggagatggctccatcaaatatattctctcagga
gaaggcgcaggcatcgtgtttaccattgacgacaccactggagacatccacgccatccag
aggctcgatcgagaggaaagagcccagtacactttaagggctcaagctctggacagacgg
acgggcaggccaatggagccagagtcagagttcatcatcaaaatccaagatatcaacgac
aatgagcccaagttcctggatggcccttatgttgccactgtgccagaaatgtcaccagtg
ggcacctctgttatccaggtgacagccacagatgctgatgatccgacctacggcaacagc
gcccgggtggtatacagcatcctccagggccagccatatttttctgtggactccaaaaca
ggtgtcattaggacagcgctcatgaacatggacagagaagccaaagaatactatgaagtg
attatccaagccaaggacatgggagggcagcttggagggctggctgggactacgacagtc
aacataaccctctcggatgtcaatgataacccaccccgcttcccccagaaacactatcag
atgagtgtgttagaatcggctccaattagctccactgtgggaagagtgtttgccaaggac
ttggatgaaggaatcaatgcagagatgaaatacactatcattgacggagatggtgcagac
gcctttgacattaacacagaccccaatttccaagttggcatcatcactgtgaagaagccc
ctgagttttgaaagcaagaaaagctataccctaaaggtggagggagcaaatcctcaccta
gagatgcgctttctgaacctgggcccattccaggacacgacaactgtgcacatcagtgtg
gaggatgtggacgaaccccctgtatttgaacctggcttttattttgtggaggtgcccgag
gatgtggcaattggaacgaccatacaaatcatttctgccaaggacccagatgtgaccaac
aactcaatcagatactccattgacaggagcagtgaccctggaagatttttctatgttgac
attacaacaggtgccctaatgaccgcaagacccctagatcgggaagaattttcttggcat
aatattactgttcttgctatggaaatgaacaatccctcccaggttggaagtgtccctgtc
acaatcaaagtcttagatgtgaatgacaatgctcctgaattcccaagattctatgaagct
tttgtctgtgagaatgccaaagcagggcagctgatccagacagtgagtgcagtggaccag
gatgatccacacaatggccagcatttctactacagcttagctccagaggctgccaacaac
cccaacttcactatcagggacaaccaagacaacactgcccggattctaaccaggagatct
ggcttccggcagcaagaacagagtctcttctacctgcccatcctgatagcagacagtgga
cagccagtgctgagcagcacagggacgctgactatccaggtgtgcagctgtgatgacgat
ggtcacgttatgtcctgcagccccgaggcctacatgctcccagtcagtttgagcagagga
gccctcattgccatcttagcctgcatctttgtcctcttggtgctggtgctgctcatcctg
tccatgcggcggcatcggaagcagccgtacatcctcgacgacgaggagaacatccacgag
aacatcgtccgctacgacgacgagggcggcggcgaggaggacaccgaggccttcgacatc
gcagccatgtggaacccccgcgagggaaaaaaacggggagccgcccccgagacgcggcag
gacatgctgcccgagatcgagagcctctcgcgctacgtgcctcagacgtgcgccgtccac
agcacggtccacagctacgtgctggccaaactctacgaggccgacatggacctgtgggcc
ccgcccttcgactccctccagacctacatgttcgagggggacggctccgtggcggggtcg
ctgagctcgctgcactcggccgcgtcggactcggagcagagcttcgacttcttgacagag
tgggggggccccctgcctcttcatttaagagttttgctggctcatcaaaccatagagacc
gatctacaaaaaaaggccacagaaaaattgttcctcaatgaaatgaatctacttgttgtg
ggatatcttttaacccttttgagacaaggttaa
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