Tupaia chinensis (Chinese tree shrew): 102478436
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Entry
102478436 CDS
T02978
Symbol
DHX8
Name
(RefSeq) DEAH-box helicase 8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102478436 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tup03041
]
102478436 (DHX8)
Enzymes [BR:
tup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102478436 (DHX8)
Spliceosome [BR:
tup03041
]
Complex C
Other components
Step II factors
102478436 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102478436
NCBI-ProteinID:
XP_006167468
LinkDB
All DBs
Position
Un
AA seq
1232 aa
AA seq
DB search
MAVAMLLAGALTGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKSSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
DRDRERDRDRDKDLSFDRERDRERDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRS
QSPLKDRKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLR
KRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNP
NRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA
NVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNP
DGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGI
GMMPNDIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIG
ETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRF
EDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR
QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIH
LTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPA
PPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA
GRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDA
PPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTI
VSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQ
ARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLI
DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTK
LSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggctatgctcttggcgggggccctaaccgggtcggagccaggccccgcggaa
gaactcgccaaactcgagtatttgtctttggtgtcgaaggtttgcaccgagctggacaat
cacttggggatcaatgacaaggatctagctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaagcttctcttgtcaaaaatggtgcagaattcacagattct
cttattagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaagtcttctacc
agcaaagatccagttgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccca
gtcctttgccaaccagataacccttcagttcggaccatgctggatgaagatgatgtgaaa
gtagctgtggatgtcctgaaagaactggaagctttaatgcccagtgcagcaggccaggag
aagcaaagagatgctgaacaccgggacaggacaaagaagaagaagcggagtcggagccga
gatcgagaccgagaacgagatcgagaccgagacaaagatctctcttttgacagagaacga
gaccgagaacgagaccgagatagagaccacaagcggagacaccgatcccggtctcgatca
cgttccaggacccgggagaggaataaagggaagtctagatatcggtccagaagtaggagt
cagagtcctctcaaagacaggaaggaccgggacaagtatggggagaggaatctggaccga
tggcgggataagcatgtggaccgccctcccccagaagagcctgccattggggacatttac
aatggcaaagttaccagcatcatgcagtttggatgctttgtgcagctggagggactaagg
aagcggtgggaaggcctggtgcacatctctgagctccggcgggaaggccgcgtggctaat
gtggcagatgttgtgagcaaaggccagagggtcaaagtcaaggtgctgtccttcactggg
accaagaccagtctgagcatgaaggatgtggatcaagagactggagaagatctgaaccca
aatcgacgtcgaaaccttgttggggagaccaatgaggaaacctcaatgcggaacccagac
agacccactcacctttcccttgtcagtgcccctgaagtagaggatgactcactggagcgc
aagcgcctcacccgcatttctgacccagagaagtgggagatcaaacagatgattgctgcc
aatgtcctttccaaagaagagtttccagactttgatgaagagactggcattctccctaag
gtggatgatgaagaagatgaggaccttgagattgaactggttgaggaagaacctccattc
ctgagagggcacaccaagcaaagcatggatatgagccccatcaaaattgttaagaaccct
gatggctccctgtcccaagcagcgatgatgcagagtgccttggccaaagaaaggcgggag
ctcaagcaggcccaacgggaagccgagatggattccattcccatgggactcaacaaacac
tgggtcgatcctcttcctgatgcggaaggcaggcagattgctgccaacatgaggggtatt
gggatgatgcccaatgacattccggagtggaagaagcatgcctttgggggcaacaaagct
tcttatggaaaaaagacccagatgtcaatcattgagcagagggagagcctgcctatttac
aaactgaaggagcagttggttcaggctgttcatgacaatcagatcctgattgttattgga
gagacaggatctgggaagacaacgcagatcacccagtacctggcagaggcaggctacact
tctaggggcaagatcgggtgtacccagcccagaagagtggcagccatgtcagtggccaaa
agggtgtcagaggaatttggttgttgcctaggccaagaggtgggctacaccattcgattt
gaagactgcactagccctgaaacagtcatcaagtacatgacggacgggatgttgctcaga
gagtgcctgattgaccctgacctcactcagtatgccatcatcatgctggacgaggcacat
gagaggacaattcacaccgatgtactctttggattgctgaaaaagactgttcagaaacga
caggacatgaagttgattgtcacctcagccaccttggatgcagtgaagttttcccagtac
ttctacgaagctcccatctttaccatcccaggtcggacatatccagtggagatactttac
accaaggaacctgagacagattatctggatgccagcctgatcactgttatgcagattcat
ttaacggagccaccaggtgatatcctagtctttctgactggtcaggaagagatcgatact
gcttgtgagatcctgtatgaaaggatgaaatccctcggacctgatgttccagagttaatt
attctcccagtgtactctgctcttcccagtgagatgcagacccggatctttgacccagct
ccccctggcagcagaaaggtcgtgattgccaccaacattgcagagacatcgctgactatc
gacggcatctattacgtggtggaccctggatttgtgaagcagaaagtttacaattccaag
acagggatcgaccagctcgtggtgacaccaatttctcaggctcaggcaaagcaacgagct
ggcagagctgggagaacgggcccagggaagtgttaccggctgtacactgaacgtgcctac
cgagatgaaatgctgaccaccaatgtgccagaaatccagagaaccaacttagcaagcaca
gtgctgtcacttaaggccatgggcatcaatgacctgttatcctttgacttcatggatgcc
ccaccaatggaaaccttgatcacagccatggagcaactgtatacgctgggggccctggac
gatgagggcctgctaactcgcctgggccgcaggatggcagagttccctctagagccaatg
ctatgcaaaatgctcatcatgtctgtgcacctgggctgcagtgaggaaatgctgaccatc
gtatccatgctgtctgtgcagaacgtcttctacaggcccaaggataaacaagccctcgca
gatcagaagaaggccaaatttcaccagactgaaggggaccacctcaccttgctggctgtg
tacaactcctggaagaacaacaagttctccaacccgtggtgctatgagaactttatccag
gctcgttccttgcgccgggcccaggacattcgcaagcagatgttaggcataatggacaga
cacaagctggatgtggtctcctgtggcaagtccacagtccgagtgcagaaggccatctgc
agtgggttcttccgcaatgctgccaagaaagacccacaggagggttaccggacactgatt
gaccagcaggtggtctacatccacccttccagtgctctcttcaatcgacagccagaatgg
gtagtgtaccatgagctggtgctgaccacaaaggagtacatgcgtgaggtcaccaccatc
gacccccggtggcttgtggagtttgccccagctttcttcaaggtctctgacccaaccaag
ctaagcaagcaaaagaagcagcagcgtcttgaacccttatacaaccgctatgaggagccc
aacgcctggagaatatctcgggccttccggcggcgctga
DBGET
integrated database retrieval system
