KEGG   Tupaia chinensis (Chinese tree shrew): 102478451
Entry
102478451         CDS       T02978                                 
Symbol
POLR2D
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03020  RNA polymerase
tup03420  Nucleotide excision repair
tup05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102478451 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102478451 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    102478451 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tup03021]
    102478451 (POLR2D)
   03400 DNA repair and recombination proteins [BR:tup03400]
    102478451 (POLR2D)
Transcription machinery [BR:tup03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102478451 (POLR2D)
DNA repair and recombination proteins [BR:tup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102478451 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 102478451
NCBI-ProteinID: XP_006153742
UniProt: L9KH10
LinkDB
Position
Un
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcagcaggtggcagtgacccgcgggctggagatgtagaggaggacgcctcacagctc
atttttcccaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggacgagcaggaactctcagaggtc
ttcatgaaaaccttaaactacacagcacgttttagtcgtttcaaaaacagagagaccatc
gccagcgtccgtagcttgctcctccagaaaaaacttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggaatccaaggccctgatcccaagcctggaaggc
cggtttgaagatgaggagctgcagcagattcttgatgatatccagacaaaacgcagcttt
caatattaa

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