Tupaia chinensis (Chinese tree shrew): 102478492
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Entry
102478492 CDS
T02978
Symbol
PUM1
Name
(RefSeq) pumilio RNA binding family member 1
KO
K17943
pumilio RNA-binding family
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102478492 (PUM1)
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Motif
Pfam:
PUF
PUF_NOP9
DUF6922
SAWADEE
Motif
Other DBs
NCBI-GeneID:
102478492
NCBI-ProteinID:
XP_006158195
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All DBs
Position
Un
AA seq
1187 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGAS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKANGLPVQNGIDADAKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTSGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYAGTQVPVDSAAATVGLFDYNSQQQLFPRPSALAMQQLTAAQQQQYALAAAHQPHIGLA
PAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAA
AAAATNSASQQTTPQAPQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFG
QGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAA
AAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNSLASGSFYGSSSLSSSSQSSSL
FSQGSAQPASTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGAPRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKFRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFSEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQQLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQSEMVRELDG
HVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLP
DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFAS
NVVEKCVTHASRTERAVLIDEVCTMSDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKV
VMHKIRPHIATLRKYTYGKHILAKLEKYYMKHGVDLGPLCGPPNGII
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacaccaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccgcagccagctgcaaatcaggctctcgcagctgggacg
cactccagccctgtcccaggatccataggagttgcaggccgctcccaagacgacgctatg
gtggattacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataacaatagcaaacaccgatggcctactggggataacattcatgcagagcat
caggtgcgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggagcatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccgagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggcacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaaggccaat
ggtttaccagtgcagaatgggatcgatgcagacgccaaagactttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccagtggtgccaagcccgtggaggacttctccaacatg
gagtcccagagtgtccctttggaccccatggagcatgtgggcatggagcctctgcagttt
gattacgcaggcacgcaggtacccgtggactcagctgcagcaactgtgggactttttgac
tacaattctcaacaacagctcttcccgcggcccagcgcgctggccatgcagcagctcacc
gcggcgcagcagcagcagtacgcactggccgccgcgcaccagccgcacatcggtttagct
cccgctgcgtttgtccccaacccgtacatcatcagcgctgcccccccagggacggacccc
tacacagctggactggccgcagcagcgacactaggtccggccgtggtccctcaccagtat
tacggagtcaccccctggggtgtgtaccccgccagtcttttccagcagcaagctgctgcc
gctgctgcagccaccaactctgccagccagcagaccaccccgcaggccccgcaaggacag
cagcaggttctccgtggaggagccagtcagcgccctttgaccccaaatcagaaccagcag
ggacagcaaacagatccactagtggcagctgcagccgtgaattctgcccttgcgtttgga
caaggtctggctgcaggcatgccaggttacccggtcctggctcctgctgcgtactatgac
caaaccggtgccctcgtggtgaacgcaggggcaagaaacggtctcggggctccggttcgg
ctcgtggctcctgcccccgtcatcatcagctcctcggctgcacaagcagctgtcgcagca
gccgcagcttcagcaaacggagcagccggtgggcttgccgggacgacaaacggacccttc
cgcccactaggcacgcagcagccccagccccagccccagcagcagcccagcaacagcctg
gcttccggctccttctacggcagcagctctctgagcagcagctcgcagagtagctctctc
ttctcccagggctctgcccaacccgccagcacgtccttggggttcggaagtagcagttct
ctcggagccaccctaggatcagcccttggagggttcggaaccgcagttgcaaactcaaac
actggcagcggggccccccgccgtgactccctgactggcagcagtgacctttataagagg
acgtcgagcagcctgacccccattggacacagtttttataacggccttagcttctcctcc
tctcctggacccgtgggcatgcctctccctagtcagggaccgggacattcacagacacca
cctccttccctctcttcacatggatcctcctcaagcttaaatctgggaggactcaccaac
ggcagtgggcggtacatctctgccgctccgggcgccgaggccaagttccgcagtgcgagc
agcgcctccagcctcttcagccccagcagcaccctgttctcctcctcgcggctgcggtat
gggatgtccgatgtcatgccctctggcaggagcagacttttggaagattttcgaaataac
cggtaccccaatttacagctacgtgagatcgctggacatatcatggagttttcccaagac
cagcatggttccagattcattcagctgaaactggagcgagccacggccgctgagcgccag
ctcgtcttcagtgagatcctgcaggctgcttaccagctcatggtggatgtgtttgggaac
tacgtcatccagaagttctttgagtttggcagcctcgagcagcagctggccctggcagaa
cggattcgaggccacgtcctctccttggctctacagatgtacggctgccgtgttatccag
aaagcacttgaatttattccctcagaccagcagagtgagatggtccgggaactggacggc
cacgttctgaagtgtgtgaaggaccagaacggcaatcacgtggtccagaagtgcatcgag
tgcgtgcagccacagtctctgcagttcatcatcgatgcgtttaaagggcaggtgtttgcc
ttgtccacacacccctacggctgcagagtgattcagaggatcctggagcattgtcttcct
gaccagacactcccgattctggaggagctccaccagcacacggagcagctcgtgcaggat
cagtacggaaattacgtaatccagcacgtattggagcatggtcgtcctgaggataaaagc
aaaattgtagcagaaatccgaggcaatgtacttgtattgagtcagcacaaatttgcaagc
aacgtcgtggagaagtgtgtcactcacgcctcacgtaccgagcgtgccgtgctcatcgac
gaggtgtgcaccatgagcgacggtccacacagtgccttatacaccatgatgaaggaccag
tatgccaactacgtggtccagaagatgattgatgtggcggagccgggccagcgcaaggtc
gtcatgcacaagatccggccccacatcgcgacgctgcgcaagtacacttacggcaagcac
atcctggccaagctggagaagtactacatgaagcacggcgtggacctggggcccctgtgc
gggccccccaatggcatcatctga
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