KEGG   Tupaia chinensis (Chinese tree shrew): 102478701
Entry
102478701         CDS       T02978                                 
Symbol
CPSF4L
Name
(RefSeq) cleavage and polyadenylation specific factor 4 like
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03015  mRNA surveillance pathway
tup05164  Influenza A
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102478701 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102478701 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tup03021]
    102478701 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:tup03019]
    102478701 (CPSF4L)
Transcription machinery [BR:tup03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102478701 (CPSF4L)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102478701 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH Torus zf_CCCH_4 zf-CCCH_3 zf-CCCH_2 zf-CCCH_4 zf-C3H1 Kinin
Other DBs
NCBI-GeneID: 102478701
NCBI-ProteinID: XP_006145927
LinkDB
Position
Un
AA seq 238 aa
MQEVIAGLEQLTFDFEKDVEMQKGTGLLPFQGMDKLGSAVCNFFAKGLCEKGRLCPLRHD
RGERTVVCKHWLRGLCQKGDDCKFLHQYDATRMPVCYFYSKFGDCNNKECLFLHVKPAFN
SWDCPWYDRGFCKDGPLCKYRHVQRTMCLNYLVGFCPKGPRCHFAHPKMNLLFNPSHVKL
VNQPPDSVPPASALEAHMTPSKCPSRHGQCQKTGPKCRSSTGRTYRGLTHDLGNQKTS
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcaggaggtcattgccgggctggaacagctcaccttcgactttgagaaggatgtcgag
atgcaaaagggcactgggctcctgcccttccagggaatggacaagttgggctcagctgtg
tgtaacttcttcgctaaagggctctgtgagaaagggaggctgtgcccgctgcgacacgac
cgaggggagcggaccgtggtgtgcaagcactggctccgggggctgtgccagaagggtgat
gactgcaagttcctgcaccagtacgacgccaccaggatgcccgtgtgctacttctactcc
aagttcggtgactgcaacaataaggagtgtctctttctccacgtgaagccagctttcaac
tcctgggactgtccttggtatgaccgaggattctgcaaggacggccccctgtgtaaatac
cgccatgttcaacgaacaatgtgtctcaactacttagttggcttctgccccaagggaccc
aggtgccattttgcacatcccaagatgaatctgttattcaacccgagtcacgtgaagctt
gtcaaccagccaccagattccgtacctcctgcttctgccctggaggctcacatgacccct
tcaaagtgcccgagtcgccatggacagtgtcaaaaaacaggtcctaagtgcaggagctca
actggtagaacttatcgaggactaacccacgatctggggaaccagaagacctcctag

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