Tupaia chinensis (Chinese tree shrew): 102478704
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Entry
102478704 CDS
T02978
Symbol
TARBP1
Name
(RefSeq) TAR (HIV-1) RNA binding protein 1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tup03016
]
102478704 (TARBP1)
03036 Chromosome and associated proteins [BR:
tup03036
]
102478704 (TARBP1)
Enzymes [BR:
tup01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
102478704 (TARBP1)
Transfer RNA biogenesis [BR:
tup03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102478704 (TARBP1)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102478704 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5477
ToxA_barrel
Motif
Other DBs
NCBI-GeneID:
102478704
NCBI-ProteinID:
XP_014442284
LinkDB
All DBs
Position
Un
AA seq
1443 aa
AA seq
DB search
MEGVLAELLLSQSRDPQALLRALCRGEASAERVETLRFLLQRLEEDEARGGAQGGGALPE
AAREVAMGYLVPLLRGTVQAGLGCAEDGLARKRARFLLRRALDVSAGQDDCACACGSEDP
DGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNGLFDCAVSEETGSW
LFHPSWHVCIYKRMLESESKVLTKEAVTHFLELYGSRRLPSSPAFSEFVIGPLMDALSES
SLYSRSPGQPAGSAAPLGCKLQTFLVTYVSLLPEEIKSSFLLSFIRKMTSRHWSAVPILS
LSKALASVPRCGALGVDGLLALRGVIHRTTVTHQVLLRGAAQCYLLKTAMNLVDVEKVAL
SDVSMFLVSLRPEESLGRGTSLWTELCDWLRVNERRFRCAPPCSPVGPPETSLNAYVKSL
VLDYIKAPPWEPGDSGALPDGSQARLVALMVMLAVDVEGAKTQHSEKQRTENVLRLFLDP
LLDALGMLGANAYMPLPKTDRCLQVLVKLLHTCVWKGPGAADDEVLPLLQSLVLSTAESV
SEFILRRLTARELSSVSDLDRCRLYLLVLVELVTLHRLAGWKRGNPVWRVISPLQKASVR
HLQEEDGNQEPTLGDQIQRVVSMASLAMVCEVIGQTPELQLETLEPGPVERFLSSLPLTQ
VLQKPRMGPQSSSVEEPPSAHGWGKVTAQYIHDQGKWVCLECLLRKRHTLIPGTEGEVPG
PELPAVQQLARTLQAALDALAVLPAERVLPVLRCMHILVPMLLTSSESLCVESFDVAWKT
VSSLSNTQLTFWPNLKAFVQLVFDNRVLTIAARVKGQAYLKIKEIMFKVIEMSAVRAGVL
NTLTNHCCRSWLESAPGVARGPLSCAGSYSELVLEACVFGTVLRRDQRLIQDAQDFIESL
GHDCAANVVIEKTNREDPYVRICAVKFLCLLDGANVSHKLLMEDLAVRLLEKDELVSRPK
SRSHANSLQHRLKNRAWQTLLVLVPRLDQNFLNRIIDKIFQAGSTNNQASIKYFVEWIII
LILHKFPQFLPKFWDCFSRGEEKLKTSICTFLSVLSHLDIIIQNNSEKKAVLQQALVAAL
RWCFSHSFSVRLYALVALKKIWSLCKTLCVEECDALASAIESSLSHVESMHREGKAQKNW
QRIQDHFFFTVFHPLQDYSLETIFYTLPRLSGLAEDEWVTIDKFTGFTELPASAGFQWHL
SRTRLRQLEPGDWSQQDVGAHSGEADDPSEWADVQKKVIPWENSVPDADSELPPQGRAAR
LRKSVSRLIVVASLTDKATNLGGLCRTCEVFGASALVVGNLQCVHDRQFQALSVSAEQWL
PLVEVRPHQLTDYLQRKKAEGYTIIGVEQTARSVDLTQYCFPEKSLLLLGNEREGIPANL
IQQLDVCVEIPQHGITRSLNVHVSGALLTWEYTRQRLPGRSHGPAGPAPRPPDYPCHGDR
QLR
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtgctcgcggagttgctgctctcccagagccgggaccctcaggctctgctc
cgggccctgtgccgcggggaggcatccgcggagcgcgtggagacactgcgctttctcctg
cagcggctggaggaagacgaggcgcgcggcggggcccagggtgggggcgcgctcccagag
gcggcgcgcgaggtcgccatggggtacctggtgccgctgctgcgcgggactgtgcaggcg
gggctgggctgcgccgaggacggcctggcgcgcaagcgcgcacgcttcctgctgcggcgc
gccctggacgtgtcggccgggcaggatgactgcgcctgcgcctgcggctctgaggaccca
gacggaccaagcctgttttggtggtctgagaagaaaaaagatgagcttctaaagttttgg
gaaaattacattttaattatggagactctggaaggaaatcagatacatgttataaagcca
gtcttaccaaagctaaacggtctctttgactgcgcagtgtcagaggaaaccgggagctgg
ctcttccacccgtcttggcacgtgtgcatttacaagagaatgttggagagcgaaagcaaa
gtcctgaccaaggaagccgttactcactttctggagctgtacgggtccaggcgtcttcca
tcttcacccgcgttttccgagtttgttattggaccactaatggacgccctctcagagagc
tctctgtacagcaggtctccaggccagccggcaggaagtgctgctcctctgggatgcaaa
ttgcagacgtttttagtcacttacgtttctcttcttccagaagaaataaagagtagtttt
ctgctcagcttcatccggaagatgaccagcagacactggagcgctgtccccattttgtct
ctctccaaggctttggcgagtgtcccacgctgcggagccctgggtgtggacgggctcctt
gctctcaggggcgtcatccatcgcaccacggtcacgcaccaggttctcctgcgaggggcc
gcccagtgctaccttctgaagacagccatgaatttggtggacgtggagaaagtggcgctt
tccgacgtctccatgttccttgtgtctctgaggccggaggagtccctgggacgagggact
tcattgtggacagagctctgtgactggctgcgtgtcaacgaacgccgttttaggtgtgcc
ccaccttgcagccctgtcgggcctcccgagacgtccttgaatgcgtacgtgaagagcctg
gttctggactacataaaggcgcctccctgggaaccaggggacagcggcgctctgcccgat
gggtcccaggccaggctcgtcgccctgatggtcatgctggctgtggatgtggaaggagcg
aagactcagcacagtgagaagcagagaacagagaatgtcctgaggctgttcctggacccc
cttctggatgccctggggatgttgggtgccaatgcctacatgcccctgccgaagactgac
aggtgcctccaggtgctggtgaagttactgcacacctgcgtgtggaaagggcccggtgcc
gccgatgatgaggtgctccctctcctgcagagcctcgtcctgtctacggcagagagtgtt
tctgagttcatcctcaggagactgactgcgcgcgagctcagcagtgtctcggatctagac
cggtgccggctgtacctgctggtgcttgtcgagctggtgacgctgcaccgcttggctggg
tggaaacggggcaatcccgtctggagggtcatctcgcccttgcagaaggcctccgtccgg
catcttcaggaggaggacggcaaccaggagcccacacttggggatcagattcagcgagtg
gtcagcatggccagcctggccatggtgtgtgaggtcatcggccagacgccggagctgcag
ctggagaccctggagccagggcctgtggaaaggttcctgtcctccctgccgctcacccag
gtgctgcagaagccgcggatggggccacagagcagcagtgtggaggagccgccgtctgcc
cacgggtgggggaaggtgactgctcagtacatccacgaccaggggaagtgggtctgcctg
gagtgcctgctgaggaagcgacacaccctcatcccgggcacggagggcgaggtcccgggg
cccgagctgcccgccgtgcagcagctggccaggacactgcaggcggccctggacgccctc
gcggttctcccggccgagcgggtcttacccgtgctgcgctgcatgcacatcctggtgccc
atgcttctgacctcctccgagtctctctgcgtagagtcttttgacgtagcttggaaaacg
gtatcttctttaagcaacacgcagctgacattctggcctaacttaaaagcttttgtccag
ttggtttttgataaccgagttcttaccattgctgcgagagtcaagggccaggcgtacttg
aaaataaaagagatcatgttcaaggtcatcgagatgtctgctgtgagagccggagtcctc
aacacactgacgaaccactgctgccggtcgtggctggagtctgcacccggcgtggcccgg
gggcccctgtcctgtgctggaagttacagtgaacttgtccttgaggcgtgtgtgtttgga
actgtgttgaggcgtgatcagaggcttattcaggatgcccaggatttcatagaaagtctt
ggacacgactgcgcagctaacgtcgtcatagagaagactaacagagaagacccctatgtg
agaatctgcgctgtcaaattcctgtgtctgctggacggcgccaacgtgtcccacaagttg
ctcatggaagatcttgcagtccggctcctagaaaaagatgagctggtgtccaggcccaag
agccgctcccacgcgaactcgctgcagcacaggctaaagaaccgggcgtggcagaccctg
ctggtgctcgtccccaggctggaccagaacttcctgaatagaattattgacaagattttc
caagctggctctaccaataatcaagcatccataaagtatttcgtagaatggattattata
ttgattcttcataaattccctcagtttcttccgaagttctgggattgcttttctcgtggt
gaagagaaacttaaaacaagtatttgtacatttttatcagttttgtcacatttggacatc
attattcaaaataactccgaaaagaaggcagttctgcagcaggccctggtcgccgccctg
cgctggtgcttcagccacagcttcagcgtgcggctgtacgcactggtcgccctgaagaag
atctggagcctgtgcaagacgctgtgcgtggaggagtgcgacgccctggcctccgccatc
gagtccagcctcagccacgtggagagcatgcacagagaggggaaggcccagaagaactgg
cagcgcatccaagaccacttcttcttcactgtgttccaccccctgcaggactacagtctg
gagaccatattttacaccctcccacgcctttcaggcctcgctgaggatgagtgggtcacc
atcgacaagttcacggggttcacggagctgcctgcaagtgctgggtttcagtggcacctc
tctcggacccgacttcgccaactggagccaggcgactggtctcagcaggatgtaggtgct
cactcaggggaagcagatgacccgtccgagtgggccgatgtccagaagaaggtgatccca
tgggagaacagcgttcccgatgcagactctgagctcccgccccagggccgtgccgccaga
ctcaggaagtccgtcagcaggctgatcgtggtggcctcgctcacggataaagccaccaat
ttaggagggctgtgccgcacttgtgaggtgtttggggcctcggcgctggtggtcggcaac
ctgcagtgcgtccacgacaggcagttccaggccctcagcgtctccgccgagcagtggctt
cctttagtggaggtgaggccacatcagctcactgactacctgcagcggaagaaggcagaa
ggctacaccatcatcggagtggaacagacagccaggagcgtggacctgacccagtactgc
ttccctgagaagtccctgctcctgctgggaaatgaacgtgaggggatcccagcgaatctg
atccagcagctggacgtgtgtgtggagatcccgcagcacggcatcacccgctcgctgaac
gtccacgtgagcggggccctgctgacctgggagtacaccaggcagcggctgccggggcgc
agccatggcccagcaggccctgcacctcgcccacccgactatccatgccacggagacagg
cagcttcgctaa
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