KEGG   Tupaia chinensis (Chinese tree shrew): 102479373
Entry
102479373         CDS       T02978                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04820  Cytoskeleton in muscle cells
tup05169  Epstein-Barr virus infection
tup05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:tup00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102479373 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    102479373 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102479373 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102479373 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tup04812]
    102479373 (VIM)
   04147 Exosome [BR:tup04147]
    102479373 (VIM)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     102479373 (VIM)
Cytoskeleton proteins [BR:tup04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     102479373 (VIM)
Exosome [BR:tup04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102479373 (VIM)
  Exosomal proteins of other cancer cells
   102479373 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri RBD-FIP Cbl_N TPR_MLP1_2 Sec10_N GAS CENP-F_leu_zip
Other DBs
NCBI-GeneID: 102479373
NCBI-ProteinID: XP_006159808
LinkDB
Position
Un
AA seq 464 aa
MSSRSVSSSSYHRMFGGQGIASRPSSSRSYVSTSTRTYSLGSALRPNTSRSLYTSSPGGV
YATRSSAVRLRSSGPSVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERYNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQNDQIDMDVSNPALTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAA
NRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTT
GHLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLN
LRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtcttccaggtccgtgtcctcgtcctcctaccacaggatgttcggtggtcagggcatc
gccagccggccgagctccagtcggagctacgtgtccacgtccacccgcacctacagcctg
ggcagcgctctgcgccccaacaccagccgcagcctctacacctcgtccccgggcggcgtg
tacgccacgcgctcctccgcggtgcgcctgcggagcagcgggcccagcgtgcggctgctg
caggactcggtggatttctcgctggccgacgccatcaacaccgagttcaagaacactcgc
accaacgagaaagtggagctgcaggaactgaatgaccgattcgccaactacatcgacaag
gtgcgcttcttggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgcaggcag
gtggatcagctcaccaacgacaaggcccgcgtggaggtggagcgctataacctggccgag
gacatcatgaggcttcgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
agcactctgcaatctttcagacaggatgttgacaatgcttctttggcacgtcttgacctg
gagcgcaaagtggagtccttgcaagaagagattgcctttttgaagaaactacacgaagag
gaaattcaggagctgcaggcccagattcagaatgaccaaatcgatatggatgtttccaat
cctgcactcacggctgccctgcgggatgtccgtcagcagtatgaaagtgtggctgccaag
aaccttcaggaggcagaagaatggtacaagtccaagtttgctgacctctcagaagctgct
aaccgcaacaacgatgccctgcgccaggcgaagcaggagtccaatgagtaccggcggcag
gtgcagtccctcacctgtgaagtggacgcgcttaaaggaactaatgaatctctggaacgc
cagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagacaccact
ggccacctgcaggatgagattcagaacatgaaggaagaaatggctcgccaccttcgtgaa
taccaagacctgctcaatgttaagatggctcttgacattgagattgccacctacaggaag
ctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttctcctccctgaat
ctgagggaaactaatctggattcactccctctggttgacacccactcaaaaagaacactt
ctgattaagacggttgaaactagagatggacaggttatcaatgaaacttctcagcaccac
gacgatcttgaatga

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