Tupaia chinensis (Chinese tree shrew): 102479373
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Entry
102479373 CDS
T02978
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04820
Cytoskeleton in muscle cells
tup05169
Epstein-Barr virus infection
tup05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102479373 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102479373 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102479373 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102479373 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tup04812
]
102479373 (VIM)
04147 Exosome [BR:
tup04147
]
102479373 (VIM)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
102479373 (VIM)
Cytoskeleton proteins [BR:
tup04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102479373 (VIM)
Exosome [BR:
tup04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102479373 (VIM)
Exosomal proteins of other cancer cells
102479373 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
RBD-FIP
Cbl_N
TPR_MLP1_2
Sec10_N
GAS
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
102479373
NCBI-ProteinID:
XP_006159808
LinkDB
All DBs
Position
Un
AA seq
464 aa
AA seq
DB search
MSSRSVSSSSYHRMFGGQGIASRPSSSRSYVSTSTRTYSLGSALRPNTSRSLYTSSPGGV
YATRSSAVRLRSSGPSVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERYNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQNDQIDMDVSNPALTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAA
NRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTT
GHLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLN
LRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaggtccgtgtcctcgtcctcctaccacaggatgttcggtggtcagggcatc
gccagccggccgagctccagtcggagctacgtgtccacgtccacccgcacctacagcctg
ggcagcgctctgcgccccaacaccagccgcagcctctacacctcgtccccgggcggcgtg
tacgccacgcgctcctccgcggtgcgcctgcggagcagcgggcccagcgtgcggctgctg
caggactcggtggatttctcgctggccgacgccatcaacaccgagttcaagaacactcgc
accaacgagaaagtggagctgcaggaactgaatgaccgattcgccaactacatcgacaag
gtgcgcttcttggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgcaggcag
gtggatcagctcaccaacgacaaggcccgcgtggaggtggagcgctataacctggccgag
gacatcatgaggcttcgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
agcactctgcaatctttcagacaggatgttgacaatgcttctttggcacgtcttgacctg
gagcgcaaagtggagtccttgcaagaagagattgcctttttgaagaaactacacgaagag
gaaattcaggagctgcaggcccagattcagaatgaccaaatcgatatggatgtttccaat
cctgcactcacggctgccctgcgggatgtccgtcagcagtatgaaagtgtggctgccaag
aaccttcaggaggcagaagaatggtacaagtccaagtttgctgacctctcagaagctgct
aaccgcaacaacgatgccctgcgccaggcgaagcaggagtccaatgagtaccggcggcag
gtgcagtccctcacctgtgaagtggacgcgcttaaaggaactaatgaatctctggaacgc
cagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagacaccact
ggccacctgcaggatgagattcagaacatgaaggaagaaatggctcgccaccttcgtgaa
taccaagacctgctcaatgttaagatggctcttgacattgagattgccacctacaggaag
ctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttctcctccctgaat
ctgagggaaactaatctggattcactccctctggttgacacccactcaaaaagaacactt
ctgattaagacggttgaaactagagatggacaggttatcaatgaaacttctcagcaccac
gacgatcttgaatga
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