Tupaia chinensis (Chinese tree shrew): 102479723
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Entry
102479723 CDS
T02978
Symbol
PNN, Pinin
Name
(RefSeq) pinin, desmosome associated protein
KO
K13114
pinin
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102479723 (PNN)
03015 mRNA surveillance pathway
102479723 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102479723 (PNN)
03041 Spliceosome [BR:
tup03041
]
102479723 (PNN)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102479723 (PNN)
Spliceosome [BR:
tup03041
]
Complex C
Other components
EJC/TREX
102479723 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102479723
NCBI-ProteinID:
XP_006152464
LinkDB
All DBs
Position
Un
AA seq
630 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFESRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEVEEAGEEEEKEVGIIHSDAEKEQEEEEQKQ
EMEVKMEEETEVRENEKQQDSQPEELMDVLEMVENVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPAKENVSAVEVEKESEEKEEKESEPQLEPVAQPQPQP
QPQPQPSSQPSSQPQPQAHPPSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSS
SSESRSQSKGRGHNRDRNHRRSMDQKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSWSDR
KKSISESSRSGKRSSRSERDQKSDRKDKRR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagtctaaag
aacgttgatgagaatattcgcaagctcaccgggcgggatccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagcggaggaggacccccagccaaacagagagatcttgaa
ggggcagtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaggagcgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaatcgacgaatatttggcttgttgatgggcacgcttcagaaatttaaacaagagtcc
actgttgctactgaaaggcaaaagaggcgccaagaaattgaacagaaacttgaagttcag
gcagaagaagagcgaaaacaggttgaaaatgagaggagagaactgtttgaggagaggcgt
gctaaacagacagaactgcgacttttggaacaaaaggttgagcttgcacagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttttatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaagtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaagtggaggaagcaggagaggaagaggaaaag
gaagtaggtataattcatagtgatgcagagaaagaacaggaggaagaggaacagaaacag
gaaatggaagttaagatggaggaagaaaccgaggtaagggaaaatgagaagcagcaggat
agtcagcctgaagaacttatggatgtgctagagatggttgaaaatgtcaaaaatgtaatt
gctgagcaagaggtaatggaaactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagtaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaag
tctctttctcctgcgaaagagaatgttagtgctgtagaagtggaaaaggagtctgaggaa
aaagaagagaaagaatctgagccccagcttgagcctgtggctcagcctcaaccccaaccc
caaccccaaccccagccctcgtcccagccctcgtcccaaccccagccccaggcccatcca
cccagtagcagcagcggaagtagttccagcagtggcagtagtagcagtcgaagtagttcg
agcagcagttccagtacaagtggcagtagcagcagagatagtagcagtagcacttctagt
agtagtgagagcagaagtcagagtaagggccggggacacaatagagatagaaatcacaga
aggagcatggatcagaagagaagagatacttcaggactagaaagaagtcacaaatcttca
aaaggtggtagtagtagagatacaaaaggatcaaaggataagaattcctggtctgacaga
aagaaatctatatcagaaagtagtcgatcaggcaagagatcttcaagaagtgaaagagac
caaaaatcagacaggaaagacaaaaggcgttaa
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