Tupaia chinensis (Chinese tree shrew): 102479964
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Entry
102479964 CDS
T02978
Symbol
VPS50, CCDC132
Name
(RefSeq) VPS50, EARP/GARPII complex subunit
KO
K23288
syndetin
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102479964 (VPS50)
Membrane trafficking [BR:
tup04131
]
Protein recycling
Others
EARP complex
102479964 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102479964
NCBI-ProteinID:
XP_006163555
LinkDB
All DBs
Position
Un
AA seq
973 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDASSASEG
SNMMSTEESNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAXXXXXXXXXXGVLATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVS
TASELRKPIYWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLS
EVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKL
TDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQK
LLAAIDDIDRPKR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccgacagggtctgaagagccctcaggagagcctc
agcgatcttggtgccattgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttctgcagactcatttgatattgttaaatatgagctggagaagctcccacctgtt
ctcaacttgcaagaattagaggaatacagagacaaattgaaacaacagcaagctgcggtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacttcattacagacaggtcttcagctagctgctgttatttgcacaaatgggagg
agacatttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
caaagaaaacgtcagttgctgattggacttctaaaatctctgagaactattaaaacactg
caaagaacagatgttcgcttaagtgaaatgctagaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagttgcaagatactttagaacaaatcgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgtcttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaataccgtgtttcaagttgtacttggttatgtggaactatgcgctggaaacaca
gataccaaattccaaaagctacaatataaagatctctgcactcatgtcacaccagacagc
tatattccatgccttgcagacctgtgcaaagcactgtgggaagttatgctcagttattac
aggactatggaatggcatgaaaagcatgacagtgaggatgcttcttcagcttctgaaggg
agtaatatgatgagtactgaagaatctaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacttacttgctc
ggaactgatttgtcaatattcaaatatgatgatttcatctttgttttggatataattagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaagagtct
atcagaaaacaaagtgtcaattatttcaaaaactaccataggacacggctcgatgaatta
cgaatgttcttagagaatgagacctgggaactttgtcctgttaagtcaaattttagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagccagtctcaacctcttcaaaaacagtgaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaagccaatcacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggagtacgatagtgac
agtgacgttcccgaagagctcaaacgagattatgtggatgagcagacaggcgatgcccca
gtgaaaagtgtttctcgagaaaccttaaaaagtaggaagaaatcagattacagtctaaac
aaagtgaatgcacctatcctaacaaatacaacgttgaatgtgataagacttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctctttgactattacttgtatgccatatataccttttttggtcggaatgattcattg
gaatcaacgggactcggccttagcagtagtagactaagaacaactctaaacagaatacaa
gaaagccttattgatctggaagtttcggctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtaccaagcccgcatctcagtcacctagtggttttgacatctggg
gataccttgtacgggttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggagtgtta
gccacagaatccttggtgttcttggctgaacagtttgagtttcttcagccacatctggat
gctgtgatgcctgcagtcaaaaagcccttccttcagcagttttattctcagaccgtctca
actgccagtgaactgcgcaaacccatttactggatcgtagctggtaaagccattgattat
gaacagatgctgctcctaatggctaacgtgaaatgggatgtaaaggagattatgtcacaa
cacaacatatatgtagatgcattgttaaaggaatttgagcagtttaacaggaggttaagt
gaagtttctaagagagttcggattcccttgcctgtgtctaatatactttgggaacattgt
atacgattggctaatagaactattgtggaaggatatgccaatgtcaagaagtgcagtaat
gagggtcgtgccttgatgcaattggattttcaacagtttttaatgaaacttgaaaaacta
acggatattagacccattcctgataaagaatttgtggaaacctatattaaagcctactac
ctaactgagaatgacatggaacgctggatcaaagagcacagggaatattcaacgaagcag
ctgactaatctggtgaacgtttgcctgggatcccatatcaataagaaagccagacaaaaa
cttctagcagctatagatgatatagacagacctaaaagataa
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