Tupaia chinensis (Chinese tree shrew): 102480225
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Entry
102480225 CDS
T02978
Symbol
DCP1B
Name
(RefSeq) decapping mRNA 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102480225 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102480225 (DCP1B)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102480225 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
102480225 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
102480225
NCBI-ProteinID:
XP_014437479
LinkDB
All DBs
Position
Un
AA seq
714 aa
AA seq
DB search
MWCEREHSGVGALGSMAEERRAGVDGADSQPEPRPSEGAEHVFLRGSLTYRSRLSPPLSR
EPDLFGSPATLILRRSILSPGCTHSSKALLTSHLLKGTHPDVYMARGPWLAYSIRIALSE
GGLSKPGTQLANQSRESGNLWSIRKVKRAAAFVLWKGVHGYREKTDVEGTLFVYTRSASP
RHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMK
NLTQYEQLKAHQGAGAGHSPMILSSGEGREVDILRMLTKAKDEYTKCKTCSEPKQITSSS
AIYDNPNLIKPIPVKPSENQQQHKPQPSQTSDPESQHLSLTALFGRLDQLACQGTAMPAL
TLHQQPQQAKXXXXXXXXXRQGAVRSLSYEEPPRCSPPVEKQLCPAIQKLMVRSADLQPL
SELPEHRPWENDSAYSAGEVFTGPGQPGPPHNTGTSRGVQGASRTQNLLEKLQSAPGVAS
RCDPGTPAPAGSAAPNCSRTLAMAPTVAPPQLYFNGPLPAQTPGHQAPGGEQPALVTGSS
GVVSPRELLQKLQLVQQEQQLHASSSRPALAARFSVAALSSRTGKPLESWINKTCSTEKQ
TPLFQVTSPQRIPATVAPSLLMSPMVFTQSTSAPPKDRAGRLLPQGSQALSPASSSLLLP
PQSPEPTAATSIPLTKLQLQEALLHLVQNDDSFLNIIYEAYLFSMTQAAVRETV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgcgagcgagagcactcgggcgtgggcgcgctggggtcaatggccgaggagagg
cgggcgggtgtagatggagcggattcccagcccgagcctcgtccctcggagggggctgag
cacgtgttcctccggggtagcctcacctaccgctctcggctctcgccgccactcagccgg
gagccagacctcttcggctccccggccacgctcatcctccggcgatccatcctgtcccct
ggctgcacccactcctccaaggctttgctcacctctcaccttctcaagggcactcaccct
gacgtgtatatggcgcggggtccctggctagcatactccataaggattgccttatcggag
ggcgggctttccaagccagggacacagctggcaaaccagagtagggagagtgggaatttg
tggagcattcgcaaggtgaagcgtgcagccgcgttcgtgctgtggaagggggtgcatggc
tacagggagaagactgatgtggaagggacgttattcgtgtacacaaggtctgcttctcca
aggcatggattcaccattatgaatagactgagcatggaaaataggacagagcccattact
aaagacctggacttccaactccaggaccctttccttctctacagaaatgccagattatct
atttatgggatttggttttatgataaggaagaatgccaaagaattgcagagctcatgaaa
aatctaactcagtacgagcagctgaaagcccatcagggagctggagcaggacactccccg
atgatcctcagttcaggagagggcagagaggtagacatcctccgaatgctcaccaaggcc
aaggacgagtacacgaagtgtaaaacctgctctgaaccaaaacaaataaccagttcatct
gccatctatgataaccccaatctcatcaagcctattccagtgaaacccagcgaaaaccag
cagcagcacaaacctcagcccagccagacctcagaccctgaatcccagcacttatccttg
acagccttgtttgggaggctggaccaacttgcatgtcagggaactgcgatgcctgcactg
accctccaccagcagcctcagcaggcaaagnnnnnnnnnnnnnnnnnnnnnnnnnngagg
cagggggccgtccgctccctgtcctatgaagaacccccgagatgctcaccccccgttgag
aagcagctctgtccagccatccagaagctcatggtcaggagtgcagacctccagccactg
tcagagctgcctgaacaccggccctgggaaaatgacagcgcctattctgctggggaggtt
tttaccgggcctggccagccagggcctccccataacactgggacgtctcgtggggtacaa
ggtgcttctagaactcaaaacctgttagagaagcttcagagtgccccaggggtagcaagc
aggtgtgaccctgggacaccagcacctgccggctcagctgccccgaactgcagcagaacc
ctggccatggcccccactgtggctccaccgcagctgtatttcaatggccccctccctgct
cagacacctggacatcaggctcccggaggagaacagcccgcactcgtgacgggcagttct
ggagtggtctcccctcgagagttactgcagaagctgcagctggtgcagcaggagcagcag
ctgcatgcgtcctcctcccgaccagccttggcagccaggttctctgtggcggctctgagc
tctagaacagggaagcccttggaatcctggatcaacaagacttgcagcacggaaaagcag
actcctctttttcaggtcacctcgcctcagcgcatccctgccaccgtggcgccttctctg
ctcatgtcccccatggtcttcacacagtccacctctgccccaccaaaggacagggctggg
aggctcctgccccaggggagccaagcactgtcccctgcctccagcagcctcctgctgccc
ccgcagagcccggagcccactgcagccaccagcatcccgcttaccaagctgcagctccag
gaggccctgctgcacctcgtgcagaacgatgacagcttcttaaatataatctacgaagcg
tacctcttcagcatgacccaggcagctgtgcgagagactgtgtga
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