KEGG   Tupaia belangeri chinensis (Chinese tree shrew): 102480308
Entry
102480308         CDS       T02978                                 
Symbol
WDR7
Name
(RefSeq) WD repeat domain 7
  KO
K24738  rabconnectin-3b
Organism
tup  Tupaia belangeri chinensis (Chinese tree shrew)
Pathway
tup04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:tup00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    102480308 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tup04131]
    102480308 (WDR7)
Membrane trafficking [BR:tup04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    102480308 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta CFAP251_N Beta-prop_EML WDR55 EIF3I ASA1 ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_SCAP PAC11 Beta-prop_WDR19_1st WDR72_alpha-sol WDR90_beta-prop_4th PEP5_VPS11_N Ge1_WD40 Tricorn_2nd PD40 LRS4 Arminin
Other DBs
NCBI-GeneID: 102480308
NCBI-ProteinID: XP_006139970
LinkDB
Position
Un
AA seq 1490 aa
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELEINPRALL
FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGSQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSETSGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHRLLDRKDKELLICPPVTRFFYGSRDYFHKLLIQGDSSGRLNIWNISD
TSDRQDGETGLEMTTSVSLQEAFDKLNPCPAGIIDQLSVMPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAACKHSQGKAEVGRKLPATEGLGKGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNVVQGQIKQVAAPVVSVRPE
ADHSGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVTAEAMQTITTAPDA
SGPEAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
LIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTD
VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALY
DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
LRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4473 nt   +upstreamnt  +downstreamnt
atggcaggaaacagccttgttctgcccatcgtcctctggggtcgcaaagcaccaacacat
tgcatctcagcagtacttttaacagatgatggggccacaattgtaactggatgtcatgat
ggacagatatgtctctgggatctttcagtagaattggaaattaacccccgagcactgtta
tttggtcacacagcttcaatcacttgtttatctaaagcttgtgcttctagtgacaagcag
tacattgtgagtgcatctgaaagtggagagatgtgtctctgggatgtgaatgatggcaga
tgtattgaatttacaaaattagcctgcactcatactggcatacagttctaccaattttct
gttggaagtcagcgagaaggaaggctcttatgccatggtcattaccctgaaatccttgtt
gtggatgccaccagccttgaggtgttatactccttagtttcaaagatatcgccagattgg
attagctccatgagtattattcgatcccaccgaacacaagaggacactgtggtagcactc
tcagtgacgggtatcttgaaagtgtggattgtcacctctgaaacaagcggtatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttactgtcaaaattgtcaaagcatc
tctttttgcgctttcacacaaaggtcacttttggttgtgtgctccaaatattggagggta
tttgatgctggcgactattccctgttgtgttcaggtcctagtgaaaatggacagacatgg
actggaggggactttgtatcagcagataaagtaatcatttggactgaaaatgggcaaagt
tatatttataaactacctgccagttgccttccagctagtgattcattccgcagtgatgtg
ggcaaagcagttgaaaatttaattcctcctgtacaacatagactcttggatcgaaaagat
aaagagttgctaatttgtcctcctgttactcggttcttctatggaagtagagattatttt
cataaactattaattcagggtgattcttctggaagattgaatatttggaacatttcagac
acatctgatagacaggatggtgaaacagggttggaaatgacaacttctgttagtttgcaa
gaggcatttgataaactgaatccctgtcctgcgggaattatagaccagctgagtgtgatg
cccaacagtaatgagcctcttaaagtaactgcaagtgtgtacatccccgcccatggacgg
ctcgtctgtggccgtgaagacggaagcatcatcattgtacctgccacacagacggccatc
gtccagctgctgcaaggcgagcacatgctcagaagaggttggccccctcacaggacactc
cgtggtcatcggaacaaagtcacatgtttgctatatcctcatcaggtctcagctcgttat
gatcagagatacctgatatctggaggtgtggacttttcagtcatcatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagattactcaacttctagtt
ccacccgaaaactgcagtgcaagagtgcagcattgcatctgctctgtagccagtgaccat
tcagtaggacttctaagtttgcgagagaaaaaatgcatcatgctggcttctcgtcacctt
ttccctattcaagtaatcaaatggaggccttctgatgattacctagtagtgggatgttca
gatggctccgtgtatgtctggcaaatggatactggagcactggatcgttgtgtgatgggg
atcacagcagtcgagatcctgaacgcgtgtgatgaagcagttcctgctgcagttgattca
ctcagtcacccagcggtcaacctgaagcaagcgatgacgagacgtagtcttgctgctctc
aaaaacatggcccaccacaagctacaaaccctcgcaactaacctcttggcctccgaggca
tcggacaaggggaatttgcctaaatattctcacaactccctgatggttcaagcaataaag
acaaacctaacagatccggacatacatgtgcttttctttgatgtggaagcgttgattatt
caacttctgactgaagaagcctctaggccgaatactgcgcttatttccccagagaatttg
caaaaagcatctggcagttcagacaaagggggctctttcctaactggaaaacgagcagca
gttctcttccaacaagtgaaagaaactatcaaagagaacataaaggagcacctccttgat
gatgaagaagaggatgaggagataatgaggcaaagaagggaagaaagtgatcctgaatat
cgtgccagcaagtctaagccactgactctattagaatacaatttaaccatggacactgca
aaactgttcatgtcctgtcttcatgcctggggtttgaatgaagttctggatgaagtgtgt
ctcgatcgccttggaatgctgaagccccattgcacagtgtcctttgggctcttatcaaga
ggaggccatatgtcactgatgcttcctggttataatcaagccgcttgtaaacattcacag
ggaaaagcagaagtaggaaggaagcttccagcaaccgagggattaggaaagggaacttac
ggagtgtcgcgagctgtcaccacccaacacctcctctccatcatatctttggcaaatact
ctaatgagtatgaccaatgcaacttttattggtgaccatatgaagaagggccctaccagg
ccacctcgaccaagcaccccagacctttcaaaggccaggggttctcctccaacttccagt
aatgttgtgcaaggacagattaaacaagttgctgcacctgtcgtttccgttcggcctgag
gctgatcactctggctctgaccccgcttccactcctgctttacatacctgtttcttagta
aatgaaggatggagtcagttggctgctatgcattgcgtcatgttgccagacctgctggga
ttggataagtttaggcctccccttctagagatgctggctcggagatggcaagatcgatgc
ctggaggtaagagaagctgcacaagccctccttctagcagagctgagaagaattgagcag
gcaggccggaaggaagccatagatgcctgggctccttatttacctcagtacatggaccat
gtcatatcacctggagtcacagcagaagccatgcagactatcaccactgccccagacgcc
tcggggccagaagccaaagtccaggaggaagagcatgaccttgtcgatgatgacatcact
gctggttgtttatcaagtgtcccacaaatgaaaaaaatttccacttcttacgaggaaaga
cggaagcaggctactgctattgttttacttggagtaataggagcagaatttggtgctgaa
attgaacctcctaaactgttgaccagacctcgaagttctagtcagattcctgagggattt
ggtttaactagcggtggatccaactactcactggccagacatacttgtaaggcgctgaca
tttcttctgctacagccgccgagccccaaacttcctccacacagcactatccgaagaaca
gccatcgatctgattggacgaggtttcacagtttgggagccttacatggatgtgtctgcc
gtcctgatggggcttctcgaactttgtgccgatgccgagaaacagcttgccaacatcaca
atggggctgcctctgagcccagcagctgactccgcccgttctgcaaggcatgcgctctca
ctcattgccacggccagaccacccgccttcatcaccaccatagccaaagaggtgcacagg
catacggctcttgcggcaaatacccaatcacagcagaatatacatactacaactcttgca
cgagctaaaggagaaattcttagagtcattgaaattctcatcgaaaagatgcccacagat
gttgtggatcttcttgtggaggttatggacatcattatgtactgccttgaaggatcttta
gttaagaagaaaggtcttcaagaatgtttcccagccatctgcaggttctacatggtcagc
tattatgagcggaatcacaggatagcagttggagctcgccatggttcagtggccctgtac
gacatccggactggaaaatgtcagacaatccatgggcacaagggaccaatcactgcagtg
gcctttgctcctgatgggcgatatcttgctacctactcgaacactgacagccatatttct
ttctggcagatgaacacgtcactgctggggagcatcggcatgttgaactcggcccctcag
ctgcgctgcattaagacctaccaggtgccccctgtgcagccggcctcccccggctcccac
aatgccctccgactggcccggctcatctggacttccaaccgcaacgtcatcctcatggcc
cacgacggaaaggagcaccgcttcatggtctaa

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