Tupaia chinensis (Chinese tree shrew): 102480324
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Entry
102480324 CDS
T02978
Symbol
DDX1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tup03041
]
102480324 (DDX1)
03016 Transfer RNA biogenesis [BR:
tup03016
]
102480324 (DDX1)
Enzymes [BR:
tup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102480324 (DDX1)
Spliceosome [BR:
tup03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102480324 (DDX1)
Transfer RNA biogenesis [BR:
tup03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102480324 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
102480324
NCBI-ProteinID:
XP_006140871
LinkDB
All DBs
Position
Un
AA seq
770 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNK
WQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWS
TMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK
DLGLAFEIPQHVKNQAFFPACVLKNAELKFNFGEEEFKFPPKDGFVAVSKALDSYVVKSQ
HSGSAQVSQTKFLPNAPKALIVEPSRELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAAR
DQLSVLDNGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHSQ
IPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP
KTDKLWERLGKNHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI
IFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI
CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV
CSNRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY
GQKRAIGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgaaattgcacaagctgtggaagagatg
gactggcttctcccaactgatatccaggctgaatctatcccactgatcctaggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtc
atccagatagtttatgaaactctaaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgctttcagtattccagtcatccagatagtttatgaaactctaaaagac
caacaggaaggcaaaaaaggaaaaacaacaattaaaactggtgcttcagtgctcaacaaa
tggcaaatgaacccatatgatagaggatctgcttttgcaattgggtcagacggcctttgt
tgtcaaagcagagaagtaaaggaatggcatgggtgtagagctactaaaggattaatgaaa
gggaaacactactacgaagtttcctgtcatgaccaaggattatgcagagttggctggtcc
accatgcaggcctccttagacctaggtactgacaagtttggatttggctttggtggaaca
ggaaaaaaatcccataataaacagtttgataattatggagaggaattcactatgcacgat
actattggatgttacctagatatagataaagggcatgtcaagttctccaaaaatggaaaa
gatcttggtctggcatttgaaataccacagcatgtgaaaaaccaagccttctttcctgcc
tgtgttctgaagaatgctgaactaaaatttaacttcggtgaagaagaatttaagtttcct
ccaaaagatggtttcgttgctgtttccaaggcactggatagttacgttgtcaaatcacag
cactcagggagtgcacaggtgtcacaaacaaagtttctccccaacgctccaaaagcactc
atcgtcgaaccttcccgggaactagctgaacaaactttgaataacgtcaagcagtttaag
aaatatattgataaccctaaattaagggaacttctgataattggaggtgttgcagcacgg
gatcagctctctgttttggataatggggtcgacatagttgtaggcactccaggaagacta
gatgatttggtgtcgactggaaagctgaacttatctcaagttagattcctggtcctggat
gaagctgatggacttctttctcaaggctattctgactttataaataggatgcacagtcag
attcctcagattacctctgatgggaagagacttcaggtgattgtttgctctgctacttta
cattcttttgatgtaaagaagctgtctgaaaagataatgcattttcccacatgggttgat
ttaaaaggagaagattccgttccagataccgtgcaccatgttgttgtcccagtgaacccc
aaaactgacaaactctgggaaaggcttggaaaaaaccacatccggaccgatgacgtacat
gcaaaagacaacacgagacctggtgctaacagcccagagatgtggtctgaagctattaaa
atcttgaagggggagtatgctgtccgggcaatcaaagaacacaagatggatcaagccatc
atcttctgtagaaccaaaattgactgcgataacttagagcagtactttatgcaacaagga
ggaggacctgataaaaaaggacaccagttctcatgtgtttgtcttcatggtgacagaaaa
ccccatgagagaaagcaaaacttggaaagatttaagaaaggagatgtaagattcttgatt
tgcactgatgtagctgctagaggaattgatatccatggtgttccctatgttataaatgtc
accctgcctgatgaaaagcaaaactatgtacatcgaattggcagagtaggaagagctgaa
aggatgggtctagccatttccctggtggcaacagaaaaagagaaggtttggtatcatgta
tgtagcaaccgtggaaaaggttgctataacacaagactcaaggaagatggtggctgtacc
atatggtacaatgagatgcagttactatctgagatagaagaacacctgaactgtaccatt
tctcaggttgagccagatataaaggtacctgtggatgaatttgatgggaaagttacctat
ggtcaaaaaagggctattggtggtggaaactataaaggccatgtggatattttggcacct
accgttcaagagttggctgcccttgaaaaggaggcacagacatctttcctgcatcttggc
taccttcctaaccagctgttcagaaccttctga
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