Tupaia chinensis (Chinese tree shrew): 102481334 Help Entry 102481334         CDS       T02978                                  Symbol VPS18 Name (RefSeq) VPS18, CORVET/HOPS core subunit   KO K20181   vacuolar protein sorting-associated protein 18 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04140   Autophagy - animal tup04148   Efferocytosis tup05132   Salmonella infection Brite KEGG Orthology (KO) [BR:tup00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102481334 (VPS18)    04148 Efferocytosis     102481334 (VPS18)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     102481334 (VPS18)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102481334 (VPS18) Membrane trafficking [BR:tup04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     102481334 (VPS18)    Hops complex     102481334 (VPS18) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_Vps41 zf-RING_5 zf-C3HC4_2 zf-RING_16 KNOX2 zf-ANAPC11 zf-RING_2 zf-RING_UBOX zf_RING_Vps8 zf-rbx1 WD40_Prp19 zf-C3HC4 Motif Other DBs NCBI-GeneID:  102481334 NCBI-ProteinID:  XP_006158739 LinkDB All DBs Position Un AA seq 973 aa AA seqDB search MASILDEYEDSLSRSAALQPGCPSVGIPHSGYVNAQLEKDVPIFTKQRIDYTPSERITSL VVSCNQLCMSLGKDTLLRIDLGKANEPNQVELGRKDDAKVHKMFLDHTGSHLLIALSSTE VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESGTGPILVGTAHGQIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRDRPD CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLTGL KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRDRFRAFLSSPRHKEWLFASR AXIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR KLGAAPPPTKGSARAKEAEGGGPTGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI DPQRYEEEHLSWL NT seq 2922 nt NT seq  +upstreamnt  +downstreamnt atggcgtccatcctggatgagtacgaggactcactgtctcgctccgccgccttgcagccc ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggac gtgcccatcttcacgaagcagcggattgactataccccttctgaacgtatcaccagtctt gtggtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac ttgggcaaggcaaatgaacccaaccaagtggagctggggcgcaaggacgatgccaaagtg cacaagatgttcctggaccacactggctcccacctgctgattgctctgagcagcaccgag gtgctctacgtgaaccgtaacggacagaaggtgaggccactggcacgctggaaggggcag ctggtggagagcgtgggctggaacaaggcgctgggcaccgagagcggcaccgggcccatc ctggtcggtaccgcccacggccagatcttcgaagcggagctctcagccagcgagggtggg cttttcggccctgccccggatctctacttccgcccgttgtatgtgctgaatgaagagggg ggtcccgcgccggtgtgctccctggaggcggagcggggccctgatgggcgaggctttgtg atcgccaccactcgacagcgcctcttccaattcataggccgagctgcagagggggctgag gcccagggcttctcggggctctttgctgcctacacagaccacccacccccattccgggag tttcccagcaacctgggctacagcgagttggccttctacacccctaagctgcgctcagcg ccgcgggccttcgcctggatgatgggggacggcgtgttatatggcgcattggactgtggg cgtcccgactcactgctcagcgaagagcgagtctgggagtacccagagggggtaggtcct ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggcg gatcgggtggaagcggtgtgcacgctgacggggcaggtggtgctgcgggatcacttcctg gagaagttcgggccgctcaagcacatggtgaaggactcgtccaccggccagctgtgggcc tacactgagcgcgccgtcttccgctaccacgtgcagcgcgaggcccgggatgtctggcgc acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagaccggcccgac tgcttggacacggtcctggcccgggaggccgatttctgcttccgccaacgtcgctacctg gagagcgcccgctgctacgccctcacccagagctacttcgaggagatcgccctcaagttc ttggaggcccaccaggaggaggccctggccgagttcctgcagcggaagctgactggtttg aagccagctgagcgtacccaggccacactgctgaccacctggctgacggaactctacctg agccggctgggggctctgcagggcgacccggaggccctgaacctctaccgggagacgcgg gaccgcttccgtgctttcctcagcagcccccgccacaaggagtggctctttgccagcagg gcgnntatccacgagctgctggccagtcatggggacactgagcacatggtgtactttgct gtgatcatgcaggactacgagcgggtggtggcctaccactgccagcacgaggcctatgag gaggccctggccgtgctggcacgccaccgggacccccaactcttctacaagttctcgccc attctcatccggcacatccctcgtcagctggtagatgcctggattgaactgggcagccgg ctggatgcccggcagctcatccctgccctggtgaactacagccagggtggtgaggcccag caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggtgagactgag caggccatccacaactacctgctgtcgctgtacgcccgtggccagcccgcctcgctgctg gcctacctggagcaggcaggggccagcccacaccgcgtgcactatgacctcaagtacgcg ctgcggctctgtgcagagcacggccaccaccgagcctgcgtccatgtctacaaggtcctg gagctgtatgaggaggctgtggacctggccctacaggtggatgtggacctggccaagcag tgtgcagacctgcccgaggaggacgaggaactgcgcaagaagctgtggctgaagatcgca aggcacgtggtgcaggaggaggaagacgtgcagacggccatggcctgcctggccagctgc cccttgctcaagatcgaggacgtgctgcccttcttccccgacttcgtcaccatcgaccac ttcaaggaggcgatctgcagctcgctcaaggcctacaaccaccacatccaggagctgcag cgtgagatggaagaggccactgccagcgcccagcgcatccggcgagacctgcaggagctg cgaggccgctacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctc ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgcctgctg caggccgtgcggcccggcctgcccgcctacaagcaggcccggctggaggagctgcagcga aagctgggggctgccccgccccccaccaagggctctgccagggccaaggaagctgagggc gggggccctactggggggcccagccgggaacagctcaaggccgacctggatgaactggtg gccgccgagtgtgtgtactgtggggagctgatgatccgctccattgaccgacccttcatc gacccccagcgctacgaggaagagcacctcagttggctctag

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