KEGG   Tupaia chinensis (Chinese tree shrew): 102481661
Entry
102481661         CDS       T02978                                 
Symbol
SYVN1
Name
(RefSeq) synoviolin 1
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04120  Ubiquitin mediated proteolysis
tup04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102481661 (SYVN1)
   04120 Ubiquitin mediated proteolysis
    102481661 (SYVN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tup04121]
    102481661 (SYVN1)
Enzymes [BR:tup01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102481661 (SYVN1)
Ubiquitin system [BR:tup04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102481661 (SYVN1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-C3H2C3 zf-Nse Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 102481661
NCBI-ProteinID: XP_014443835
LinkDB
Position
Un
AA seq 615 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPTTSAAALSRPSGA
ATTAAAGTSAAPTSAPAPGSASAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFA
GLTPEELQALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATVVSP
TEETSPTVVAAASSTSIPSSEPTTPSPGTSPSALETEKPPAPESVGTEELPEDGEPDAAE
LRRRRLQKLESPIAH
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgttccgcactgcagtgatgatggcggccagcctggcgctgaccggagccgtggtggct
catgcctactacctcaaacaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcttgtacatccaggcgttcgtccttgtcttcctgttgggtaaggtg
atgggcaaggtgttctttgggcaactaagagcagcagagatggagcacctactggagcgt
tcctggtatgctgttactgagacctgtctggccttcactgtattccgggatgacttcagc
ccccgctttgttgcactcttcaccctcctcctctttctgaaatgtttccactggttggct
gaggatcgtgtggactttatggaacggagtcccaatatctcctggctttttcactgccgc
attgtctctcttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
catagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agtgagaacccctgggacaacaaggccgtgtacatgctctacacagagctattcacaggc
ttcatcaaggttctgctatacatggccttcatgaccatcatgatcaaggtgcataccttc
ccactctttgccatccggcccatgtacctagccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccagatgccacc
ccggaggaactccaggcaatggataatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagcgactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgtatggatgtcctgcgggcatccctgccagcc
cagtcaccgccacctcctgagccagcagatcaggggccacctcctgcccctcacccccca
ccactcctgccccagccccccaacttcccccagggcctcctgcctccttttcctccaggg
atgttcccactatggccccccatgggcccctttccccctgtcccacctcctcccagctca
ggagaggctgtggcccctccaaccaccagtgcagcagccctttctcggcccagtggagca
gccacaaccgcagctgctggcaccagtgctgctcccacctctgcccctgcccctggctct
gcctcagccccagaggctggccctgccccaggcttccccttcccgcctccctggatgggt
atgcctctgcccccaccctttgccttccccccaatgcctgtgccccctgcgggctttgct
ggcctgaccccagaggagctgcaggctctggagggccatgagcggcagcatctggaggcc
cgtctgcagagcctgcgcaacatccacacactgctggatgctgccatgctgcagatcaac
cagtacctcactgtgctggcttccctggggcctccccggcctgccacggtggtcagcccc
acagaggagacttcccctacagttgtcgctgctgcctcctccaccagcattcccagctct
gagcccaccactccatccccaggcacctccccatcagctctggaaacggaaaagcctcca
gctcctgagtcagtgggcacagaggagctgcctgaggatggggaacctgatgctgcagag
ctccgtcgccgccgcctgcaaaagttggaatcccccattgcccactga

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