KEGG   Tupaia chinensis (Chinese tree shrew): 102481685
Entry
102481685         CDS       T02978                                 
Symbol
COL9A1
Name
(RefSeq) collagen type IX alpha 1 chain
  KO
K08131  collagen type IX alpha
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04151  PI3K-Akt signaling pathway
tup04510  Focal adhesion
tup04512  ECM-receptor interaction
tup04820  Cytoskeleton in muscle cells
tup04974  Protein digestion and absorption
tup05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102481685 (COL9A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102481685 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102481685 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102481685 (COL9A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102481685 (COL9A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102481685 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tup00535]
    102481685 (COL9A1)
Proteoglycans [BR:tup00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102481685 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3 Toxin_R_bind_N DUF4882
Other DBs
NCBI-GeneID: 102481685
NCBI-ProteinID: XP_006168354
LinkDB
Position
Un
AA seq 921 aa
MKNCWKIPVFFFACSFLVPWASATVKRRPRFPVNSNGNGGNELCPKIRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGSDVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQIDVNGFAVLGKLADNPEVSVPFELQWMLI
HCDPLRPRRETCHELPVRITPSQTAEERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGERGKPGAPGKPGTPGADGLPGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGTPGLPGELGRVGPIGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK
GEKGARGFDGEPGPRGLPGAPGDQGQRGPPGETGPKGDRGAQGSRGIPGPPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGMPGAKGIAGEKGNTGAPGKPGQM
GNSGKPGQQGPPGEVGPRGPRGLPGSRGETGPVGSPGLPGKMGSLGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGEAGRRGELGDIGLPGPKGSAGNPGEPGLRGPEGSR
GLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHFAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEK
GERGPPGRGSKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTMQAGQRAFSKGPDA
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaagaactgctggaaaattccagttttcttctttgcatgcagtttcctggtaccctgg
gcatctgcaactgtcaagcgtcgcccaagattccctgtcaattcaaatggtaatggtgga
aatgaactctgtccaaagatcaggatcggccaagatgacttaccagggtttgacctgatt
tcccagttccaggtagataaagcagcatctagaagagctatccagcgagtagtgggatca
actgcattacaggtggcttataagttgggaagtgatgtggacttcaggattccaaccagg
cacttatatcccagtggactgcctgaagaatactcctttttaactacttttcggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaagattcctcagggaaggag
caagttggcgtgaagattaatggccagactaaatctgttgcattttcatacaaaggcctg
gatggaagtctccaaactgcagctttttcgaatttgccgtccttgtttgattcccagtgg
cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgactgcaacagg
attgagtccttacctattaagccaagaggccaaattgatgtcaatggctttgctgtgctg
ggaaaacttgcggataatcctgaagtttctgttccgtttgaacttcagtggatgttgatt
cattgtgaccccctgagacccaggagagaaacatgccacgagctaccagtcagaataacg
cccagccagaccgctgaggagagaggtccgcctggcgagcagggtcctcccgggcctccg
ggcccccctggagttcccggcatcgatggcatagatggtgaccgaggtccaaaaggtccc
cccggccccccgggtcctgctggagaacgggggaaaccaggagccccgggcaagcctggc
acgccgggcgccgacggcttaccaggacctgatggatcccctggctctgttggaccaagg
ggacagaaaggcgaacctggtgtgcctggatctcgtggatttccaggccgtggtattcct
ggacctcctggtcctcctgggacaccaggactccctggagagcttggccgtgtaggacct
attggtgaccctggaaaaagaggaccacctggccccccaggccccccaggacccagtgga
acaattggctttcatgatggtgatccactgtgtcccaattcctgtccacctggtcgctca
ggatacccaggtctaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
ccaggaagacaaggacacaagggtgaagaaggtgaccagggagaactgggagaagttgga
gctcaaggacctccaggagctcaaggtttgagaggcatcactggcatagtcggggacaaa
ggggaaaagggtgctcggggctttgatggagaacctgggcctcggggtcttcctggtgca
cctggcgaccagggacaacgaggacctccaggggaaacaggtcccaaaggagacagagga
gctcaaggttctagaggaattcctggcccccctgggcccaaaggagacacgggcttgcca
ggtgtggatggccgtgatgggatacctggaatgcctggaacaaagggtgaaccggggaaa
ccagggcctcctggtgatgcaggattacaggggttaccaggagtacccggaatgcctggt
gcaaagggtattgctggcgaaaagggtaacacaggtgctccaggaaagcctggtcaaatg
ggaaattcaggcaaaccgggccaacaggggcctccaggagaggtgggacctcgaggaccc
cggggccttcctggcagtagaggagaaacagggccagtaggatccccaggcctaccaggt
aaaatgggttctcttggtagccctggtcttcctggcttgcctggacctcctggacttcct
ggaatgaaaggtgacaggggtgtagttggtgaacccggtccaaagggtgaacagggtgct
tctggtgaagaaggtgaagcaggaagaaggggtgaacttggagatataggattgcctggc
ccaaagggatctgcgggtaaccctggggagcctggcttgagagggcctgaaggaagccgg
gggcttcctggagaggaaggaccaagaggaccacctggaccccgaggcgtgcagggagaa
cagggtgccacaggcctgcctggaattcagggtcctccaggtagagcaccaacagatcag
cacattaagcaggtgtgcatgagagtcatgcaagagcattttgctgaaatggctgctagt
ctcaagcgtccagactctggtgcttcaggcctccctggcaggcctggccctcctggaccc
ccaggaccccctggagagaatggcttcccaggacaaatgggaattcgtggcctcccaggc
attaaaggcccccctggtgctcttggtttgaggggacctaaaggtgacttgggagaaaag
ggggagcgtggccctccaggaagaggttcgaaaggtttgcccggagctacaggtctgcca
ggtgacccagggcctgccagctatggaagaaatggccgggatggagagcgaggaccccca
ggggtggcaggaattcctggtgtgcctggcccgcccggacctcctggccctcccggtttc
tgtgagccagcctcttgcaccatgcaggctggtcagcgagcatttagcaaggggcctgat
gcatga

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