KEGG   Tupaia chinensis (Chinese tree shrew): 102482302
Entry
102482302         CDS       T02978                                 
Symbol
WDR61
Name
(RefSeq) WD repeat domain 61
  KO
K12602  WD repeat-containing protein 61
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102482302 (WDR61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102482302 (WDR61)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     102482302 (WDR61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR19_1st eIF2A Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Tricorn_2nd Ge1_WD40 Beta-prop_Nup120_160 Cytochrom_D1 PROPPIN Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 VPS8_N WDR54 Beta-prop_RIG_1st WD40_like GSDH Beta-prop_IFT122_2nd Nucleoporin_N DUF2415 Vgb_lyase
Other DBs
NCBI-GeneID: 102482302
NCBI-ProteinID: XP_006142753
LinkDB
Position
Un
AA seq 313 aa
MVFGVAEGPGQRYSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDE
RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL
AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII
NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA
SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV
GDDQEIHIYDCPV
NT seq 942 nt   +upstreamnt  +downstreamnt
atggttttcggggtcgccgagggcccgggccagaggtacagtattctcttcaaacaagaa
caagcccacgacgatgccatctggtccgtcgcctgggggacaaacaagaaggagaactct
gagacggtggtcacaggctccctggacgacctggtgaaggtctggaaatggtgtgacgag
aggctggacctgcagtggagtctggagggacatcagctgggggtggtgtctgtggacatc
agccacaccctgcccatagccgcgtccagttctctcgacgctcacatccggctctgggac
ttggaaaacggcaaacagatcaagtctatagatgcaggacctgtggatgcctggactttg
gccttttctcctgactcccagtacctggccacaggaacacatgtggggaaggtgaacatt
tttggtgtggaaagtggaaaaaaggaatattctctggacacgagaggaaagttcatcctc
agcattgcatacagccctgatgggaaatatctggccagcggcgccatagacggaatcatc
aatatttttgatattgcaactggaaaactcctgcacacgctggaaggccatgccatgcct
attcgctccctgaccttctccccggactctcagctcctggtcactgcttcagatgatggc
tacatcaagatctatgatgtccaacacgccaacctggctggcacgctgagtggccacgcc
tcctgggtgctgaatgtcgccttctgccctgatgacacgcactttgtttccagttcgtcc
gacaagagtgtaaaagtttgggatgttggaacgaggacttgtgttcacaccttctttgat
caccaggatcaggtctggggagtaaaatacaatggaaatggttcaaaaattgtgtctgtt
ggcgatgaccaggagattcacatctatgactgtccggtttag

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