Tupaia chinensis (Chinese tree shrew): 102482492 Help Entry 102482492         CDS       T02978                                  Symbol CAPN1 Name (RefSeq) calpain 1   KO K01367   calpain-1 [EC:3.4.22.52] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04141   Protein processing in endoplasmic reticulum tup04210   Apoptosis tup04217   Necroptosis tup04218   Cellular senescence tup04382   Cornified envelope formation tup05010   Alzheimer disease tup05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     102482492 (CAPN1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     102482492 (CAPN1)    04217 Necroptosis     102482492 (CAPN1)    04218 Cellular senescence     102482492 (CAPN1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102482492 (CAPN1)  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     102482492 (CAPN1)    05022 Pathways of neurodegeneration - multiple diseases     102482492 (CAPN1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:tup01002]     102482492 (CAPN1) Enzymes [BR:tup01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      102482492 (CAPN1) Peptidases and inhibitors [BR:tup01002]  Cysteine peptidases   Family C2: calpain family    102482492 (CAPN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5 Motif Other DBs NCBI-GeneID:  102482492 NCBI-ProteinID:  XP_006149943 LinkDB All DBs Position Un AA seq 719 aa AA seqDB search MGARRMAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYEQLRMHCLQSGAL FRDEAFPPVPQSLGFKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDC WLLAAIASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKL VFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLY NIILKALERGSLLGCSIDISSVLDMEAVTFKKLVKGHAYSVTGAKQVNYRGQMVNLIRMR NPWGEVEWTGAWSDGSSEWNNVDPYEREQLRIKMEDGEFWMSFRDFMREFTRLEICNLTP DALKSRTIRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDEVDDADDYGDRES GCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSE QFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQVQANLPDE KVLSEEEIDENFKALFRQLAGEDMEISVRELQTILNRIISKHKDLRTKGFSLESCRSMVN LMDRDGNGKLGLVEFNILWNRIRNYLAIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKL YELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt atgggcgctcgcaggatggctgaggagatcatcaccccagtgtactgcacaggggtgtct gcacaagtgcagaagcagcgggccaaggagctgggcctgggccgccatgagaacgccatc aagtacctgggccaggactatgagcagctgcggatgcactgcctgcagagtggggccctc ttccgggacgaagccttccccccagtgccccagagcctgggcttcaaggacctgggcccc aactcttccaagacttatggcatcaagtggaagcgccccacggagctgctgtcaaacccc cagttcatcgtggatggagccacccgcacagacatctgccagggagcgctgggggactgt tggctcctggctgccatcgcctccctgaccctcaatgacaccctcctgcaccgagtggtt ccacatggccagagcttccagaatgggtatgctggcatcttccacttccagctgtggcag tttggggagtgggtagatgtggtcgtggatgaccttctgcccaccaaggatgggaagctg gtgttcgtgcactctgcccaaggcaatgagttctggagcgccttgctggagaaggcctat gccaaggtgaatggcagctacgaggccctgtcagggggcagcacctcagagggctttgag gacttcacgggtggggtcactgagtggtatgagctgcgcaaggcacccagcgacctctac aacatcatcctcaaggcgctggagcgaggctccctactgggctgctccattgatatctcc agtgttctggacatggaggccgtcacattcaagaagctggtgaagggccacgcctactct gtgactggggccaagcaggtgaactaccgaggccagatggtgaacctgatccggatgcga aacccctggggcgaggtggagtggacgggagcctggagtgatggttcctcggagtggaac aacgtggacccttatgaacgggagcagctccggatcaagatggaggatggggagttctgg atgtccttccgagatttcatgcgtgagttcactcgcctggagatctgcaacctcacccct gatgcactcaagagccggaccatccgcaattggaacaccacgctctacgagggcacttgg cggcgggggagcaccgcagggggctgccgcaactacccagccaccttctgggtgaacccc caattcaagatccggctagacgaggtggatgatgcagatgactacggggatcgcgagtcg ggctgcagcttcgtgctcgctctcatgcagaagcaccgccgccgcgagcgccgcttcggc cgggacatggagaccatcggcttcgcggtctacgaggtccctccagagctggtgggccag ccggccgtgcacttgaagcgtgacttcttcctggccaacgcatctcgggcgcgctcagag cagttcatcaacctgcgagaggtcagcacccgcttccgcctgccgcctggggagtacgtg gtggtaccctccaccttcgagcccaacaaggagggcgactttgtgctgcgtttcttctcg gagaagagcgcggggacccaggaactggatgaccaggtccaggccaatctcccagacgag aaagtgctctcagaagaagagattgacgagaacttcaaggccctcttcaggcaactggca ggggaggacatggagatcagtgtcagggagctgcagaccatcctcaacaggatcattagc aaacacaaagacctgcggaccaagggcttcagcctggagtcgtgccgcagcatggtgaac ctcatggaccgtgatggcaatgggaagctgggcctggtggaattcaacatcctgtggaac cgcatccggaactatctggctatcttccggaagtttgacctggacaagtcgggtagcatg agtgcctatgagatgcggatggccatcgagtctgcaggcttcaagctcaacaagaagcta tacgagctcatcatcacccgctactcagagcccgacctggcggtcgacttcgacaacttc gtgtgctgcctggtgcggctggagaccatgttccggtttttcaaaactctggacacagat ctggatggagtcgtgacctttgacttgtttaagtggttacagctgaccatgtttgcatga

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