Tupaia chinensis (Chinese tree shrew): 102483297
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Entry
102483297 CDS
T02978
Symbol
UTP20
Name
(RefSeq) UTP20, small subunit processome component
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tup03009
]
102483297 (UTP20)
Ribosome biogenesis [BR:
tup03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102483297 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
Motif
Other DBs
NCBI-GeneID:
102483297
NCBI-ProteinID:
XP_006141449
LinkDB
All DBs
Position
Un
AA seq
2789 aa
AA seq
DB search
MKPKPISHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSFAFQPLLDLVVQLARDLQM
DFYPHFQDFFLAITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSRIYSLYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAGQAVKLILQKLGPVTESETQLPWILVGETLKNMVKSTVFYIYKEHFGVFFDCLQESL
LNLHTKVTKTNCCESSEQIKRLLETYLILVKHGHGSKITKPADVCKVLSKTLQITNLSTS
CRETLLDVISALILGENVSLPETLIKETIEKIFESRFERRLIWNFSEVMFAMKQFEQLFL
PSFLSYIENCFLIDDTVIKGEALAVLAKLILNKAAPPTAGSMAIEKYPLVFSQQTVGCYV
KQKTRSKKGEEPFPVLDYLLSIIQLPPNEDTTYLSHTWAVLVVLPHIRPLEKEKVIPLIT
RFIESLFMAVDRGSSGKGNLFVLCQAVNTLLSLEESSELLHLVPVERVKNLVLMFPLEPS
VLLLADLYYHRLSLCGCKGPLSEEALMELFPKLQANISTGVSKIRLLTIRILNHFDIHLP
ELMEDDGLSERQSAFAILRQAELVPATVNDYREKLLHLRKLRHDVVQTAVPDGPLQEVPL
RYLLGMLYVNFSALWDPVIELISSHACEMENKQFWKVYYEHLEKAATHAEKELQSTVREE
ETSFGDESQEQIQEGDVGALYHEQLALKTDCRERLDHTNFRFLLWRALAKFPERVEPRSR
ELSPLFLRFINNEYYPADLQVAPTQDLRRKGKGVTVEEMEEEAAAGEDEEMEEEGVPQDE
PSQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEPKLYELYLQLLLHQDQTVQKITLDCI
MTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNTVVKTAHRADLFPILMRILYGRM
KNKTGNKTQGKSASGTRTAIVLRFLAGTQPEEIQIFLDLLFEPVKHFKNGECHSAVIQAV
EHLDLSKVLPLGRQHGVLNSLEIVLKNISHLISAYLPKILQILLCMTATASRILDQREQI
QLRFINPLKNLRRLGIKMITDIFLDWESYQFRAEEIDAVFHGAVWPQISRLGSESQYSPT
PLLKLISVWSRNARYFPFLAKQKPGHPECDILTNVFAILSAKNLSDATASIVMDIVDDLL
NLPDFEPTEAVLSLPVTGCIYTDVAENTDESITVGGRLILPHVPAILQYLSKTTISAEKV
KKKKNRAQVSKELGILSKISKFMKDKEQSSLLITLLLPFLHRGNIAQDTEIDILVTVQNL
LKHCQDPTSFLKPLAKLFSVIKNKLSRQLLCTVFQSLSDFESELKYITDIVKLNAFDQRH
LDDINFDVRFATFQTITNYIKEMQTVDINYLIPVMHNCFYNLELGDMSLSDNASMCLMTI
IKKLAALNVTEKEYKEIIHRSLLEKLRKGLKSQTESIQQDYTTVLSCLIQTFPNQVEFKD
LVQLTHYHDPEMDFFENMKHIQIHRRARALKKLAKQLVEGKVMLSSKSLQNYIMPYAMTP
IFDEKMLKHENITIAATETIGAICKHLSWPAYIYYLKHFIHVLQTGQINQKLGVSLLVIV
LEAFHFDHKTLEEQMGKIQNEENTIEVIELPEHEAMEVEHMDEEEKKNTDNEDLANCDPV
DSQGTSTKEPECIAQPISLLPQNKEELERTIKTIQGAITGDILPRLHKCLASTTKREEEH
KLVKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMEANLPSILLKVCVLLKNRAQEIRDIA
RSTLAKIIEDLGVHFLQYVLKELQTTLVRGYQVHVLTFTVCMLLQGLSSKLQVGDLDSCL
DIMIEIFNHELFGAIAEEKEVKQILSKVMEARRSKSYESYEILGKFVGKDQVTKLILPLK
EILQNTTSLKLARKVHETLRRIIAGLIVNEEMTAESILLLSYGLVSENLPLLTEKEKNPA
APAPDPRLPPQSCLLLPPTPVRGGQKAVVSRKTNMHIFIESGLQLLHLSLKTSKIKSSSE
HVLEMLDPFVSLLIDCLDSRDVKVITGALQCLIWVLRFPLPSIETKVEQLTKHLFLLLKD
YAKLGAAKGQNFHLVVNCFKCVTILVKKVTSYQITEKQLQVLLAYAEEDIYDTSRQATAF
GLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPARVQCRQVFLKYILDYPLGDKLRPNL
EFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLHENCGMFFLPLCLMMVNDDSAVCKKM
ASMTIKSLLSKINLEKKDWLFDMVTTWFGAKKSLNRQLAALVCGLFVESEGVDFERRLGT
VLPVIEKEIDPENFKDIVEETAEKAADRLLFSFLTLISKLIKECNIIQFTKPSETLSKIW
SHVHSHLRHPHSWVWITAAQIFGLLFASCQPEKLIQNWNAKRTKKKPSEPVAIRFLTSDL
DQKMKSLSLASCHQLHSKFLDQSLGEQVFKHLLFIAKILYLLESNSGNKQGEIKEDMEEP
EVLGDSVAGEAVEELETHADGEAASDGDEKEEAKEERSRPATLLWLIQRLSRMAKLEAAY
SPRNPLKRICIFKFLGAVAMDLGVDKVKPYLPVIIAPLFRELNSTYSDQDPVLKNLSQEI
IELLKKLVGLESFSLAFASVQKQASEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEA
KKRKIEFLSTGQKHSCVQAIRPRDKKATA
NT seq
8370 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagcccatttcccacaagaccgagaacacctaccggtttcttacattcgct
gaacgactgggtaatgtgaatatcgacattattcaccggattgataggactgcgagctat
gatgaggaggttgaaacctacttttttgaaggtctgctgaaatggagagaattgaacctt
acggaacacttcggaaaattttacaaagaagttattgacaagtgccaatcatttaaccag
ttggtctatcatcaaaacgaaatagttcagagtttgaagactcacctgcaaattaagaac
agttttgcctttcaaccccttttggatttggtcgtacagttggcacgagacctgcagatg
gatttctatccacactttcaagatttttttctggctatcacctcaatcctggagacacag
gacacagagttgttggaatgggctttcacctcgttatcatatctttacaaatacctgtgg
agactgatggtaaaggacatgtccagaatatacagcttgtacagtacactcctggctcat
aaaaaactacacataagaaattttgctgctgaaagctttacttttttgatgagaaaggtc
tctgataaaaatgcacttttcaatttaatgtttctcgatcttggagaacatccagaaaaa
gtagaaggagttggacagttgctctttgaaatgtgcaaaggagtaagaaatatgtttcac
tcctgtgcaggccaggcagtgaagctaattttgcaaaagctaggaccagttactgaatct
gaaactcagctgccatggattctagttggagaaacactcaaaaacatggtcaaatccact
gtattctacatctacaaggaacattttggtgtattttttgactgtttgcaagaatcgctc
ctgaatctacatacaaaagtaacaaaaactaactgttgcgaaagttctgaacagataaaa
agattgttagaaacatacctgatactggtgaaacatggacatggctccaaaataaccaaa
cctgctgatgtttgtaaggtactgtcgaaaacattacaaattaccaatctctccacatct
tgccgggagaccctcttggatgtaatttctgctttgatcctaggtgaaaatgtttccttg
ccggagaccctcatcaaagagaccattgaaaaaatttttgagagcagatttgaaagacgt
ctaatttggaatttttctgaagtcatgtttgctatgaagcagtttgaacagctttttcta
ccaagctttctctcctatattgagaattgcttcttgatcgatgacactgtgatcaaaggt
gaagctctggccgttttggccaagctcattctgaacaaagcagcacctcccactgctggc
tcgatggcaattgaaaagtaccctttggttttctcacaacagacagtgggatgctatgta
aagcagaagactagatccaagaaaggggaggaaccattcccagtattggactatctctta
tctattattcagttacccccaaatgaagacacgacttacctttcacacacctgggcagtt
cttgtagtattgcctcatattagacctcttgagaaagagaaggtgatacctctaatcaca
cgcttcatagagtcactcttcatggctgttgacagagggagctctggaaaaggaaactta
tttgttctttgtcaagctgtaaatacactgctaagtttagaagaatcttctgaacttctt
catttggttcctgtggaacgtgtgaagaatttagtattaatgtttcctttagagccatct
gtgttgctgttggctgatctctattatcacagattatccttatgtggctgcaaaggacca
ctttctgaggaagctttaatggaattatttcctaagttgcaagcaaacatttcaactggt
gtatccaagattcggcttttgacaataaggatcctgaaccactttgacattcatcttcca
gaattgatggaggatgacgggctctcagagcggcagtctgcttttgctatattacgccag
gcagaacttgtcccagcaactgtgaatgattacagagagaagcttcttcatttaagaaaa
ctcagacatgatgtggtgcagactgcagttccagatgggccattacaagaggtaccactt
cggtatttgttaggcatgttatatgttaacttcagtgctctctgggatcctgttattgag
ctcataagttctcatgcatgtgaaatggaaaataagcagttttggaaggtctactatgaa
catctagaaaaagcagccacacatgctgagaaagagctgcaaagtactgtaagagaggag
gagacatcctttggggatgaaagtcaggagcagatccaggaaggagatgtgggagctctc
tatcatgaacagctggcattgaaaacagactgtcgggagagactggaccatactaacttt
cggtttttgctctggcgagctctggcaaaattcccagagagggtagaaccaagatccagg
gagctttcaccacttttcttgagatttatcaacaatgagtattacccagcagacctgcaa
gttgctccaacccaagatctgcggagaaaaggcaaaggggtaacagtggaggaaatggaa
gaggaagctgctgctggagaagacgaggagatggaggaagagggggtgccccaagacgaa
ccctcacagaagaaaaagacaagaagagcagctgcaaagcaattaattgctcatttgcaa
gttttctctaaattttcaaatccacgggccttatacctcgagcccaagttatatgagtta
tatcttcagctgttgctacaccaagatcaaacagtgcaaaagataaccttggattgtata
atgacttataaacatcctcatatcctcccttaccgggaaaatttacaaagattgcttgaa
gacagaagcttcaaggaagagattgtgcattttagcatttcagaagataataccgtagtg
aaaacagcccaccgagcagacctgtttcctattctgatgagaattttgtatggccgaatg
aagaataagactggaaataaaactcaagggaaatccgcttcaggaactcgcacagccatt
gtcctgcggttccttgctgggacccaacctgaggagatccagatattcttagatctgctg
tttgaacctgtgaagcacttcaagaatggagaatgccattctgcagtcattcaagcagta
gaacatttggatttatctaaagttcttcctttgggtcgtcagcatggtgtcttgaatagc
cttgaaatagtattgaagaacattagtcacctgatcagtgcatatttaccaaagattttg
caaattctgctctgtatgacagcaactgcatcacgtatccttgaccaacgagaacagata
caactaaggtttattaacccactaaaaaacttaagacgtcttggaatcaaaatgataact
gatatctttctggactgggaatcctatcagttcagagcagaagaaatcgatgctgtgttt
catggtgcagtttggccccagatcagcaggcttggatctgagagtcagtattcgcctact
cctctgctgaaactaattagtgtctggagtagaaatgcaagatatttcccttttctggct
aaacagaaacctggacacccagaatgtgatatcctgaccaatgtttttgcgattctctca
gcaaagaatctctctgatgccacagccagtattgtaatggatatagtcgatgaccttctt
aaccttccagattttgagcccacagaagcagttttgagcttgccagtaactggatgcata
tatactgacgtagcagaaaacacagatgagtctatcacagtaggaggaagattaattttg
cctcatgtacctgcaattctccagtatctcagcaaaactacaataagtgcagaaaaggtg
aaaaagaaaaagaatagagcacaagtcagtaaggagcttggaattctctcaaagatcagc
aagtttatgaaagacaaagaacaaagttctttacttattaccctcctcctacctttcctc
caccgcggtaacattgctcaggatacagagatcgatattctggtgacagtacagaacttg
ttaaaacattgtcaggaccctacaagcttcctcaagcctctggcaaaactcttctcagtt
attaagaacaagttatcaagacaattactttgtacagttttccagagtctttctgatttt
gagagtgaattaaagtacattactgatattgtcaagcttaacgcctttgatcaaagacac
cttgatgatatcaactttgacgttcgcttcgcaacgtttcagacgatcactaattatatt
aaggaaatgcaaactgtggatataaactacctcattccagttatgcataattgtttctat
aatctggagttaggagatatgtctttaagtgataatgccagcatgtgcttgatgactatc
attaaaaagctagctgcgttgaatgtcacagagaaagaatataaagaaatcattcatcgt
tctctcctggaaaaattgaggaaaggattgaagagccagacagagagtattcaacaggat
tatactacagtactttcgtgtttaattcaaacctttccgaatcaggtggaatttaaagat
ttggtacagcttactcattaccatgatccagaaatggacttctttgagaacatgaagcac
attcagatccacaggagagcaagagccttgaagaagctggcaaaacaactagtagaaggc
aaagtcatgctgtcctctaaatctcttcagaattacatcatgccttatgccatgactcca
atttttgatgagaaaatgctcaagcatgaaaacataaccattgctgccactgagactatt
ggagctatttgcaaacatctttcttggccagcatatatatattatttgaaacatttcatc
catgtcttacagacaggacaaatcaatcaaaagttgggtgtcagtttgctagtaatagtg
ttagaagcatttcactttgaccacaaaactctcgaagaacaaatgggaaaaattcagaat
gaagaaaacacaatagaagtgattgagttaccagagcacgaagccatggaagtggagcac
atggatgaggaggagaagaaaaacacagacaacgaagacctagcaaactgcgatccagtg
gattctcaagggacatccactaaggaacctgagtgtatcgcacagcccatctctcttctt
cctcagaataaggaagaattggagagaacgattaaaactatccaaggagccataactggg
gatatcctgcccaggctacataaatgccttgcatctacgactaaaagagaagaagaacac
aaactcgtaaagtcaaaggtggtgaatgatgaggaagtagttcgagttcccttagctttt
gccatggtcaaactaatgcagtcccttccacaagaagttatggaagctaatctgccaagt
attttgctgaaagtctgtgtcctcctcaagaacagagcacaggaaatcagagacattgca
cgcagcactcttgcaaaaataatagaggatctgggcgtacatttcctacagtatgtttta
aaagaattgcagaccaccctggtccgtggatatcaggtccatgtgctcactttcactgtt
tgcatgttgctgcaaggcctcagcagcaagctgcaagttggagatttggactcctgttta
gatataatgatcgagatttttaaccacgagttgtttggtgccattgccgaagagaaggaa
gtaaagcagatcctctccaaagtcatggaggcgcggagaagcaagagttacgaatcttac
gaaatcttgggcaagtttgtaggaaaagatcaggttacaaaactcatccttccattgaaa
gagatcttacaaaacaccacaagtttaaaactggcccggaaagttcatgaaactttacgc
cgaatcattgcaggattaattgtaaatgaggaaatgacagcggaatccattctattgctc
agttacggtttggtcagtgaaaatcttcccctgttaacagagaaggaaaaaaacccagca
gccccagccccggatccacgcctgccaccccagagctgccttctgctccccccaactccg
gtccgtggtggacagaaagctgttgtgagcaggaaaaccaacatgcacatatttattgaa
tctggacttcagctgcttcatctaagtctgaagacttctaagatcaagtcttcaagtgaa
catgtcctggaaatgttggatccatttgtgtccctcctcatagactgcctggactccagg
gacgtgaaggtgatcacaggtgctttacagtgcctgatctgggtcttgaggttccctctg
ccttctatagaaactaaagtggaacagttgacaaaacaccttttcctcttgctgaaggac
tatgcaaaactcggggctgccaagggccagaacttccacctggtggtgaattgtttcaag
tgtgttaccatcctggtaaagaaagtcacgtcctaccagataactgagaaacagctgcaa
gttctgctggcatacgctgaagaggacatttatgatacttcaagacaagccacagcattt
ggtcttctgaaggctattttatcaagaaagttattggtcccagaaatcgatgatgtcatg
cggaaagtttcgaagttggccatttctgcacaaagcgaacctgcaagggtccagtgcaga
caggtttttctgaaatatattcttgactatccattgggtgacaaattgagaccaaacttg
gaattcatgcttgcccaactgaattacgaacatgagactgggagggagtccaccttggaa
atgatcgcctacctctttgacacattccctcagggactgctccatgagaactgcggaatg
ttcttccttcctctttgtctaatgatggtgaacgatgactctgccgtgtgcaaaaagatg
gcctccatgacaatcaaatccttactcagtaaaatcaatcttgagaaaaaagattggctg
tttgatatggttactacctggtttggagcaaaaaagagcttaaatagacagctcgctgct
ctggtctgtggcttatttgtggaaagtgaaggagtcgattttgagagaagacttggaact
gttcttcctgtaattgaaaaggaaattgatcctgaaaactttaaagatatcgtggaagaa
actgcagagaaagctgcggatcgccttctgtttagttttcttacactgataagtaaactc
atcaaggaatgtaatatcattcagtttacgaagccctcggagactttgagtaaaatctgg
agtcatgtgcactctcacctgcgacatccacacagctgggtgtggatcacagcagcccag
atttttggattgctctttgcctcttgccagccagagaagctgattcaaaactggaatgcc
aagaggactaaaaagaaaccttcagaacctgtagccatcaggttcctaacaagtgacctt
gaccagaagatgaagagtctctctctcgcctcttgccatcagttgcattctaaattcttg
gatcagtctctcggagagcaggtttttaagcatttgttgttcatagccaagatcttatat
ttactggaatctaattctgggaataagcaaggtgagataaaagaggacatggaagaaccg
gaagttttaggagacagtgtggccggggaggcagtagaagaacttgagactcacgcagat
ggagaggcggcgtctgacggggatgagaaggaggaggcgaaggaagaacgcagcaggcca
gccacgctgctgtggttgatccaaagactgtcccgcatggcaaagttggaagctgcttat
tcacctagaaaccccttaaagcggatatgcatcttcaagttcctgggcgctgtagcaatg
gatcttggcgtggacaaggtgaagccgtatctcccagtgatcatagcgcctttgttccga
gaactgaatagcacctattcagaccaagaccctgtgttaaagaatctatcccaggagatc
atagaattactcaagaagcttgttgggctcgagagcttctcattagcctttgcctctgta
cagaaacaggcaagtgagaaaagggcactccggaaaaagaggaaggcactggagtttgta
actaatcctgatattgctgccaagaaaaagctgaagaaacacaaaaataaaagtgaagca
aagaagagaaagatagaattcctgagtacaggacaaaaacattcctgcgtccaggctata
aggccaagagacaaaaaagccacagcctga
DBGET
integrated database retrieval system
