Tupaia chinensis (Chinese tree shrew): 102483349
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Entry
102483349 CDS
T02978
Symbol
UPF2
Name
(RefSeq) UPF2 regulator of nonsense transcripts homolog (yeast)
KO
K14327
regulator of nonsense transcripts 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102483349 (UPF2)
03015 mRNA surveillance pathway
102483349 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102483349 (UPF2)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102483349 (UPF2)
mRNA cycle factors
P-body specific factors
102483349 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
102483349
NCBI-ProteinID:
XP_006150078
LinkDB
All DBs
Position
Un
AA seq
1267 aa
AA seq
DB search
MPAERKKSASMEEKDALLNNKEKDCSERRPVSSKEKPKDDLKLTAKKEASKAPEDKKKKP
EDDKRKKEDKERKKKEDEKVKTDEESKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFASSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSQNKESNKDDPKEAKEPKDNKEISSPDDLELELENLEINDDTLELEGGDEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESLRQVHDLEQEFLIKLGLVNDKDSKDS
MTEGENLEEDEEEEERGTETEEQSGNESEVNEPEEEEGSDDDDEGEEEEEENTDYLTDSN
KENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIP
LHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWSQQQ
AEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADL
IFKTGGR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgaaagaagtcagcaagtatggaagaaaaagacgctttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagtagcaaggagaaaccaaaagatgat
ctcaagctcactgccaagaaggaggccagcaaggcccccgaagacaagaagaagaaacca
gaagacgataagagaaaaaaggaagataaggagcgcaagaaaaaagaagatgaaaaggta
aagacagacgaagaatcaaagaagaaagaggaagaagagaaaaagaaacatgaagaggaa
gagagaaagaagcaggaagagcaggcaaagcgtcagcaagaagaagaagctgctcagttg
aaagagaaagaagaatcccttcagcttcatcaggaagcttgggaacgacatcaattaaga
aaggaacttcgtagcaaaaaccaaaatgctccagataaccggccagaggaaaatttcttc
agccgcctagactcaagtttgaagaaaaatacagcttttgtcaagaaactaaaaactatt
acagaacagcagagggactccttgtcccatgactttaatggcctaaatttaagcaaatac
attgctgaagctgtagcttctattgtggaagcaaagctaaaaatctctgatgtgaactgt
gctgtgcacctgtgctcactctttcaccagcgctatgctgactttgcctcatcacttctt
caggtctggaaaaaacattttgaagcaaggaaagaggagaaaacacctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggatttttactgacaag
gaaggtctttccttaatctatgaacagcttaaaaatattattaatgctgatcgggaatcc
cacactcatgtttctgtggtgattagtttctgtcgacattgtggagatgatattgctgga
ctcgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctccaagt
gaaataattagtccagagaaacaacaacctttccagaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgtattctacattctaaaggggaactaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatggacctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatctgggaagat
gaagatgctcgcaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagacaatgaaaaaagtcagaacaaagagtccaacaaagatgatcctaaagag
gcaaaagaacctaaggataataaggagatatcaagccctgatgatttggaacttgagttg
gagaatctagaaattaatgatgataccttggagttagagggtggagatgaagctgaagat
ctcacaaagaagcttcttgatgaacaagaacaagaggatgaagaagccagcactggatct
catctcaagctcatagtagatgctttcctccagcagttgcccaattgtgtcaaccgagat
ttgatagacaaggcagctatggatttttgcatgaacatgaatacaaaagcaaacaggaag
aagttggtacgagcactcttcatagttcctagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaaaca
aagaacaaaactgttcgttttattggagaattaactaaatttaagatgtttaccaaaaat
gatacacttcattgcttaaagatgcttctatcagacttttctcatcaccacattgaaatg
gcatgtaccttgctggaaacgtgtggacgatttcttttcagatcaccagaatctcacctg
aggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcatcttgatgca
agatatgtcaccatggtagagaatgcatattactattgtaacccacccccagctgaaaaa
acagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttatacaaggat
ttgtctaaggttaccactgaaaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtgaaagactatgttatttgctgtatgataaacatatggaatgtgaaatataat
agtattcattgtgtagccaatcttttagcaggactggtactctaccaagaggatgttggg
atccatgttgtggatggagttttagaagatatacgattaggaatggaggttaatcaacct
aaatttaatcagcggcgtatcagcagtgcaaagttcttaggggaactttataattaccga
atggtggagtcagctgttattttcagaactctttattcctttacttcgtttggtgttaac
cctgatggatctccaagttcactggaccctcctgagcatcttttcagaattagactagta
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gattgctttcttgtatatttccagcgttatgtttggtggaagaaaagtttggaagtttgg
acaaaagatcatccatttcctattgatatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccctcaggcaggtacatgac
ttggaacaagaattcttaataaaactaggcctagtaaatgacaaagattcaaaagattct
atgacagaaggagaaaatcttgaagaggatgaagaagaggaagagaggggaaccgaaaca
gaagaacagtctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttctgat
gatgatgatgaaggagaggaggaagaggaagagaatacagattatcttacagattctaat
aaggaaaatgaaactgatgaagaaaatactgaggtaatgattaaaggaggtggacttaag
catgtaccatgtgttgaagatgaggacttcattcaagctctggataaaatgatgctagaa
aatcttcagcaacgaagtggcgaatctgtgaaagtgcaccaacttgatgttgctatccct
ttgcatctcaaaagccagctgaggaaagggcctccccttggtggtggagaaggagagaca
gagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacagcagttt
aagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggagccagcaacag
gcagaacaagaagaaaggatgcgaatgaaaaaactcacactagatatcaatgaacggcaa
gaacaagaagattatcaagaaatgttgcagtctctcgcacagcgcccagctccagcaaac
accaatcgtgaacggcggcctcgttaccaacatccgaagggagcacctaatgcagatcta
atctttaagactggtgggaggtaa
DBGET
integrated database retrieval system
