Tupaia chinensis (Chinese tree shrew): 102483652
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Entry
102483652 CDS
T02978
Symbol
POLR2A
Name
(RefSeq) RNA polymerase II subunit A
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03020
RNA polymerase
tup03420
Nucleotide excision repair
tup05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102483652 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
102483652 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102483652 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tup03021
]
102483652 (POLR2A)
03400 DNA repair and recombination proteins [BR:
tup03400
]
102483652 (POLR2A)
Enzymes [BR:
tup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102483652 (POLR2A)
Transcription machinery [BR:
tup03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102483652 (POLR2A)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102483652 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
102483652
NCBI-ProteinID:
XP_006151958
LinkDB
All DBs
Position
Un
AA seq
1896 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN
YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ
SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY
SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS
PKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtccgtgacggaaggcggt
atcaaatacccagagacaactgagggaggccgccccaagcttggggggctgatggatccc
cggcaaggggtgattgagcggacgggtcgctgccagacatgtgcaggaaacatgacagag
tgccctggccacttcggccacatcgagctggccaagcctgtgtttcatgtgggcttcctg
gtgaagaccatgaaagttttacgctgtgtctgcttcttctgctccaaactgcttgtggac
tctaacaacccgaagatcaaggacatcctggccaagtctaagggacagcctaagaagcgg
ctcacacatgtctacgacctctgcaagggcaagaacatctgcgagggcggggaggagatg
gacaacaagttcggtgtcgagcagcccgagggcgacgaggatctgaccaaagaaaagggc
catggcggctgtggacggtaccagccccggatccggcgctccggcttggagctgtatgcg
gagtggaagcatgtgaacgaggactctcaggagaagaagatcctgctgagtccagagcga
gtgcacgagatctttaaacgcatctccgatgaggagtgcttcgtgctgggcatggagccc
cgctacgctcggcccgagtggatgatcgtcacggtgctgccggtgcccccgctctccgtg
cggcctgctgttgtgatgcagggctctgcccgcaaccaggacgatctgactcacaagctg
gccgacatcgtgaagatcaataatcagctacggcgaaatgagcagaatggtgcagcggcc
catgtcattgcagaggacgtgaagctgctccagttccatgtggccactatggtggacaac
gagctgcccggcttgccccgtgctatgcagaagtctggacgtcccctcaagtccctgaag
cagcggctgaagggcaaggaaggccgagtacgagggaacctgatgggcaaacgtgtggac
ttctcagcccgtaccgtcatcacccccgaccccaacttgtccatcgaccaggttggcgtg
ccccgctccatcgctgccaacatgacctttgcagagatcgtcacccccttcaacattgac
aggctgcaagaactggtgcgcaggggaaatagccagtacccaggggccaagtacatcatc
cgggacaacggcgatcgcattgatctgcgtttccaccccaaacccagcgacctgcacctg
cagactggctataaggttgaacggcacatgtgcgacggagacatcgttatctttaaccgg
cagccaacgttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtcc
acttttcgtttgaatcttagcgtgacgactccgtacaatgcagacttcgatggggatgag
atgaacttgcacctgccacagtccctggagacacgggcagagatccaagagttggccatg
gtgcctcgcatgattgtcaccccccagagcaaccgacctgtcatgggtattgtgcaggac
acgctcacggcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctaatgttcctgtccacctgggacgggaaggtcccacagccagccattctg
aagccccggcccctgtggacaggcaagcagatcttctctctcatcatacccggccacatc
aattgtatccgtacccacagcacccatcccgatgatgaggacagtggcccttacaagcac
atctctcccggggacaccaaggtggtggtggagaatggggagctgatcatgggcatcctg
tgtaagaagtccctgggcacatcggccggctccctggtccacatttcctacctggagatg
ggtcatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctc
ctcatcgagggtcataccattggcatcggggactccattgcggattctaagacttaccag
gacatccagaacactattaagaaggccaaacaggatgtaattgaggtcatcgagaaggcc
cataacaacgagctggagcccaccccggggaacactctgcgtcagacttttgagaatcag
gtgaaccgtatcctcaatgatgcccgagacaagactggctcctctgcccagaaatccttg
tcagaatacaacaacttcaagtctatggtcgtgtcaggagctaagggttccaagatcaat
atctcccaggtcattgctgtcgtcgggcagcagaacgtggaaggcaagcggatcccgttt
ggattcaagcaccgaactctgcctcacttcatcaaggacgactatggacctgagagccgt
ggctttgtggagaactcctacctggccggcctcacacccaccgagttcttcttccacgcc
atggggggtcgcgaagggctcatcgacacagctgtcaagactgccgagactgggtatatc
cagcggcggctgatcaagtctatggagtcggtgatggtgaagtatgacgcgacggtgcgg
aactccatcaaccaggtggtgcagctgcgctacggcgaggacggcctggcgggcgagagc
gtggagttccagaacctggctactctcaaaccttctaacaaggcttttgagaagaagttc
cgttttgattataccaacgagcgggccctgcggcgcaccctgcaggaggacctggtgaag
gacgtgctgagcaatgcgcacattcagaacgagctggagcgggaattcgagcggatgcga
gaggatcgggaggtgctccgggtcatcttcccaactggcgacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaatgctcagaaaatcttccatatcaacccgcgcctt
ccctctgacttgcatcccatcaaagtggtagagggcgtcaaggaactgagcaagaaactg
gtgattgtgaatggagatgacccgctaagccgacaggcgcaggagaacgccacgctgctc
ttcaacatccacctgcggtccacactgtgctcccgccgcatggccgaggagttccggctc
agtggggaggcctttgactggctgcttggggagatcgagtccaagttcaaccaagccatc
gcccatcctggggagatggtgggagctctggccgcacagtccctcggagaacctgctact
cagatgaccttgaacaccttccactatgctggcgtgtctgccaagaacgtgacactgggt
gtgcccagacttaaggagctcatcaacatttccaagaagccaaagaccccgtccctcact
gtcttcctgttgggccagtctgctcgagatgctgagagagctaaggacattctgtgccgc
ctggaacatacaacgttgcggaaagtgactgccaacacagccatctactatgaccccaac
ccccagagcacagtggtagctgaggaccaggagtgggtgaacgtctactatgagatgcct
gacttcgacgtggcccggatctccccctggctattgagagtagagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgagaagatcaacgctggtttcggc
gatgacttgaattgcatctttaacgatgacaacgcagagaagctggtgctccgtatccgc
atcatgaacagtgatgagaacaagatgcaggaggaggaagaggtggtggacaagatggat
gatgacgttttcctgcgctgcatcgagtccaacatgctgaccgacatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccgcagacggacaacaagaagaagatc
atcatcacggaggacggggagttcaaggccctgcaggagtggatcctggagacggacggc
gtgagcttgatgcgtgtgctgagcgagaaggacgtggaccccgtgcgcaccacgtccaat
gacattgtggagatcttcacggtgctgggcatcgaggccgtgcggaaggcgctggagcga
gagctgtaccatgtcatctccttcgacggctcctacgtcaattaccggcacttggctctc
ctgtgcgacaccatgacctgccgcggccacttgatggccatcacccgacacggagtcaac
cgccaggacacggggccactcatgaaatgttcctttgaggaaacggtcgatgtgctcatg
gaagcagcggcacacggggagagtgaccccatgaagggggtctctgagaacatcatgctg
ggccagctcgctccagccggcaccggctgttttgacctcctgctggatgcagagaagtgc
aagtacggcatggagatccccaccaacatccctggcctgggcgctgccggacctaccggc
atgttcttcggctcagcgcccagtcccatggggggaatatctcctgccatgacgccctgg
aaccagggtgcgaccccagcctatggcgcctggtctcccagtgttgggagtggaatgacc
ccaggggcagctggcttctctcccagtgctgcttcagatgccagtggcttcagcccaggc
tactcccctgcctggtcgcccacgccgggctccccgggctcgccaggcccctcgagtccc
tacatcccctcaccaggtggcgccatgtcgcccagctactctccaacatctcctgcctat
gagccccgctctcctgggggctatacaccccagagtccctcgtactcccccacttcaccc
tcctactctcctacctccccctcctattctccaaccagtcccaactacagccccacctcc
cctacctcccccagctactcacccacttcccccagctactcccccacctcccccagctac
tcacccacctcccccagctactcacccaccagcccgaactattctccaacaagtcccaac
tacaccccaacatcacccagctatagccctacgtctcccagctattcacccactagtccc
aactacacgccgaccagccccaactacagcccaacctctccgagctactctccaacttca
cccagctactccccgacctcacccagctactccccttccagcccacgatacacaccacag
tctcccacctacaccccaagctcccccagctacagccccagctctcccagctacagcccc
acctcacccaagtacaccccaaccagtccatcctacagccccagctcaccagagtatacc
ccaacctctcccaagtactcccctaccagccccaagtattcacccacctctcccaagtac
tcgcctaccagccccacctattcacccaccactccgaagtactccccaacgtctcctact
tactcacccacctctccagtctacaccccaacctcccccaagtattcgcctactagccct
acctactcacccacctcccccaagtactcgcccaccagccccacctactcacccacctcc
cccaaaggttcaacctactctcccacttcccctggctactcacccaccagccccacctac
agtctcaccagcccagccatcagcccagacgacagtgatgaggagaactga
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integrated database retrieval system