KEGG   Tupaia chinensis (Chinese tree shrew): 102485164
Entry
102485164         CDS       T02978                                 
Symbol
BTRC
Name
(RefSeq) beta-transducin repeat containing E3 ubiquitin protein ligase
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04114  Oocyte meiosis
tup04120  Ubiquitin mediated proteolysis
tup04218  Cellular senescence
tup04310  Wnt signaling pathway
tup04340  Hedgehog signaling pathway
tup04390  Hippo signaling pathway
tup04710  Circadian rhythm
tup05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102485164 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    102485164 (BTRC)
   04340 Hedgehog signaling pathway
    102485164 (BTRC)
   04390 Hippo signaling pathway
    102485164 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    102485164 (BTRC)
   04218 Cellular senescence
    102485164 (BTRC)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102485164 (BTRC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102485164 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tup04121]
    102485164 (BTRC)
   03036 Chromosome and associated proteins [BR:tup03036]
    102485164 (BTRC)
Ubiquitin system [BR:tup04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     102485164 (BTRC)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102485164 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_DCAF4 F-box Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR11_2nd F-box_5 Beta-prop_NWD2_C DUF1513 DUF4508 DUF6188
Other DBs
NCBI-GeneID: 102485164
NCBI-ProteinID: XP_006166379
LinkDB
Position
Un
AA seq 605 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKPENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNGPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECRRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDDKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTY
TYVSR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggacccggccgaggccgtgttgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcggtgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttac
aacagctgtgccagactctgcttaaaccaagaaacagtatgtctagcaagcactgctatg
aagcctgagaattgtgtggccaaaacgaaacttgccaatggcacttccagcatgatcgtg
cccaagcaacggaaactctccgcaagctatgagaaggaaaaggagctgtgtgtcaaatat
tttgagcagtggtcagagtcggatcaggtggaatttgtggaacaccttatatctcaaatg
tgtcattaccaacatgggcacataaactcatatcttaaacctatgttgcagagggatttc
ataaccgctctgccagctcggggtttggatcatattgctgagaacattttgtcatacctg
gatgccaaatcactatgtgctgctgagctcgtgtgcaaggaatggtaccgagtgacgtct
gatggcatgttatggaagaagctcatcgagaggatggtcaggacagattctctgtggaga
ggcctggcagagcgcagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatggtcctcccaactctttttatagagcactttatcctaaaattatacaagatattgag
acaatagaatctaattggagatgcggaagacacagtttacagaggatccactgccgaagt
gaaacgagcaaaggagtttactgtttacagtacgatgaccagaaaatcgtaagcggcctt
cgggacaacacgatcaagatctgggataaaagcacactggaatgcaggcggattctcaca
ggccacacgggttctgtcctgtgtctgcagtatgacgagagggtgatcataactggatca
tcggattccacggtcagagtgtgggatgtaaatacaggtgagatgctgaacacgctgatt
caccactgtgaagcagtcctgcacttgcgtttcaataacggcatgatggtgacctgctcc
aaagatcgatccattgcggtgtgggacatggcctccccaactgacatcaccctccggagg
gtgctggtcggacaccgagctgctgtcaacgttgtagactttgatgacaagtatatcgtt
tctgcatctggggacagaactataaaggtgtggaacacaagtacttgtgaattcgtaagg
accttaaatggacacaaacgaggcattgcctgtttacagtaccgagacaggctggtcgtg
agtggctcttctgacaacaccatcaggttatgggacatcgagtgtggtgcgtgtttacga
gtgttagagggccatgaggagttggtgcgttgtattcgatttgatgacaagagaatagtc
agcggggcctatgatgggaaaattaaagtgtgggatcttgtggctgctttggacccccga
gctcctgcagggactctgtgtctccggacccttgtggaacattctggaagagttttccga
ctccagttcgatgaattccagattgtcagtagttcccatgatgacacaatcctcatctgg
gacttcctaaacgacccagctgcccaagcggaacccccacgctccccttctcggacatac
acctacgtctccagataa

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