Tupaia chinensis (Chinese tree shrew): 102486067
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Entry
102486067 CDS
T02978
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
102486067 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tup04040
]
102486067 (TRPA1)
Ion channels [BR:
tup04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102486067 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
DUF1843
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102486067
NCBI-ProteinID:
XP_006139856
LinkDB
All DBs
Position
Un
AA seq
1119 aa
AA seq
DB search
MKRSLRKMLRPGEKKEPQSVVYQGVEDDMDESKESIKVVFEGSKCHLPNIIKKHKKLNKY
DDTNASPLHHAAAEGDVELMKMIINESSCEVLNEMDDYGNTPLHWAAEKNQVESVKFLLS
RGANPNLRNNNMMAPLHIAVQATHNEVMKVLTEHSSTNINLEGESGNTAVMIACSKDNSE
ALQILFNKGAKPCKSNKWGAFPIHQTAFSGAKKCMEIVLKFGEERGYSRQSHINFVNNRK
ASPLHMAVQGGDLEMIKMCLDNGAHIDLMENGKCTPLHFAATQGATDIVKLMISSYSGSS
DVVNAADGNQETLLHRASLFDHHELADYLISVGADINSTDAEGRSPLILATTSASWNIVN
LLLSKGARVDIKDHFGRNFLHLTVQQPYGLRNLQPEFLQMKHIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSINSKSKDKKSPLHFAASYGRINTCQRLLKDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNMK
CTDRLDEEGNTALHFAAREGHAKAVALLLSYDAEIVLNKQQASFLHVALHNKRKEVVLTA
IRNKRWDDCLKVFSHYSSSNKCPIMEMVEYLPECMKVLLDFCMLHSTEDKSCEDYHIEYN
FRYLQCPLEFTKKIATPQDVVYEPLSTLNVMVQHNRIELLNHPVCKEYLLMKWMAYGFRA
HMMNLGSYCLGLIPMTLLVVSITPGMAFNSTGIINETRGHTEILDTTNSYPIKICMILVF
LSSIFGCFKEVAQIFQQKRNYFLDVNNAIEWIIYIASMIFVLPLFINIPGDVQWQCGAMA
IYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFVFLLLAFGLSFYVLLSIQDAF
SSPVLSIIQTFSMMLGDVNYRDSFLEPFLRDELAYPFLSFSQLTVFTIFVPIALMNLLIG
LAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSIVVYPNRPRHGGRLLR
IFCYLFCVKEAKQEMPHTDTSLEMEILKQKYRLKDVTSLLEKQHELIKLIIQKMEIISET
EDEDNHCSFQDRFKKEQLEQRNSKWNSVLKAVKAKTHCS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaggaagatgctgcgccccggggagaagaaggagccccagagcgtt
gtctaccagggagtggaggacgacatggacgagtccaaggaatccattaaggtggttttt
gaaggaagcaaatgtcacttaccaaacatcattaagaaacataagaaattaaacaaatac
gatgacacaaatgcctcccctttgcatcatgctgcagcagaaggtgatgttgagctgatg
aagatgatcatcaatgagtcttcttgtgaagtgctgaatgagatggatgactatggtaac
acccctctgcactgggctgcagaaaaaaatcaagttgaaagtgttaagtttcttctcagc
agaggagctaacccaaacctccgcaacaacaacatgatggcgcccctacacatagctgtg
caggccacgcacaacgaagtgatgaaggtcctgactgagcacagcagcactaatattaat
ttggaaggagaaagtggaaacacagctgtgatgatcgcatgctccaaagataatagtgag
gcactgcaaattttgtttaataaaggagctaagccatgtaagtcaaataaatggggagcc
ttccctattcaccagactgcattttcaggtgccaagaaatgcatggaaattgtattgaag
tttggtgaagaacgtggatatagtagacagtctcacattaactttgtgaataataggaaa
gccagccctctccacatggctgttcaaggtggagacttggaaatgattaaaatgtgcctg
gataatggtgcacacatagacctgatggagaatgggaagtgcacaccccttcattttgct
gctacccagggagccacggacattgttaaacttatgatatcatcctattctgggagcagt
gacgtggttaatgcagctgacggaaatcaagagaccctgcttcacagagcctcattattt
gatcaccatgaactagcagactacttaatttcagtgggagcagatattaatagcaccgat
gctgaaggacgctctccacttatcttagcaactacttctgcatcttggaatattgtaaat
ttgctactctctaaaggtgcccgtgtggacataaaagatcactttggacgcaattttcta
catttgaccgtacagcaaccttatggattaaggaatttgcaacctgagtttttgcagatg
aaacatattaaagaactggtcatggatgaagacaatgatgggtgtacacctctacattat
gcatgtagacagggggttcctgtctctgtaaataacctgcttggctttaatgtgtccatt
aattccaaaagcaaagataagaaatcacccctgcattttgcagccagttatgggcgtatc
aatacctgccagagactcctaaaagacataagtgacacaaggcttttgaatgaaggtgac
ctccatggaatgactcctcttcacttggcagcaaaaaatggacatgataaagtagttcag
cttcttctgaaaaaaggtgcattatttctcagtgaccacaatggctggaccgctttgcat
catgcgtccatgggcgggtacactcagaccatgaaggtcattcttgatactaatatgaag
tgcaccgatcgactagatgaagaagggaacacagcacttcactttgctgcaagagaaggc
cacgccaaagccgttgcacttcttctgagctacgatgctgagattgtcctgaacaagcag
caggcctcttttttgcatgttgcacttcacaataagaggaaggaggtggttcttacggcc
atcaggaacaaaagatgggatgactgccttaaggtttttagtcattattcttcaagcaat
aagtgtccaatcatggaaatggtagaatacctccctgaatgcatgaaagtacttctagat
ttctgcatgttgcattccacagaagacaagtcctgtgaagactaccatatcgagtataat
ttcagatatcttcagtgtccattagaattcaccaaaaaaatagcaactccacaggatgtt
gtgtatgagcccctttccaccctcaatgtaatggtacaacataaccgcatagagcttctc
aaccatcctgtgtgcaaagaatatttacttatgaaatggatggcttatggattcagagcc
catatgatgaacctaggatcttactgcctaggtctcatacctatgaccttacttgttgtc
agtataacaccaggaatggccttcaactccactggaattatcaatgaaaccaggggtcat
acagaaatattggacaccacgaattcctatccaattaaaatttgtatgattttagttttt
ttatcaagcatatttggatgtttcaaagaagtggcccaaattttccagcagaaaaggaat
tactttttagatgttaacaatgccattgaatggattatctacatagcaagcatgattttt
gtgctgcccttgttcattaatataccaggtgacgtgcagtggcaatgcggggcaatggct
atctacttctactggatgaacttcttattgtatcttcaaagatttgaaaattgtggaatt
ttcattgttatgttggaggtaattttgaaaactttactgaggtctacagttgtatttgtc
ttccttcttttggcttttggactcagtttttatgtccttctcagtatacaggatgccttc
agctctccagtgctctctataatccagactttcagcatgatgctaggggatgtcaattat
cgagactccttcctagagccatttttgagagatgaattggcatatccatttctgtccttt
tcacaacttactgtattcacgatatttgttccaatcgccctgatgaatttactcattggt
ttggcagttggtgacattgctgaagtccagaaacatgcatcactgaaaaggattgctatg
caggtggaacttcataccagcttagagaagaagctgccactgtggttcctacgcaaagtg
gatcagaaatccatcgtcgtgtatcccaacagacccagacacgggggaaggttattacgt
atattttgctatttattttgcgttaaagaagcaaaacaagaaatgccacatactgataca
tctttagaaatggaaatattgaagcagaaatacaggctgaaagatgtcacttctctcctg
gaaaaacagcatgagctcatcaaactcatcattcagaagatggagatcatctctgagaca
gaagatgaagataaccattgttcttttcaagacaggtttaaaaaggagcagttggaacaa
aggaacagcaaatggaattctgtgttgaaagcagtaaaggcaaaaacacactgctcctag
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