KEGG   Tupaia chinensis (Chinese tree shrew): 102486459
Entry
102486459         CDS       T02978                                 
Name
(RefSeq) aly/REF export factor 2
  KO
K12881  THO complex subunit 4
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013  Nucleocytoplasmic transport
tup03015  mRNA surveillance pathway
tup03040  Spliceosome
tup05014  Amyotrophic lateral sclerosis
tup05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102486459
  09122 Translation
   03013 Nucleocytoplasmic transport
    102486459
   03015 mRNA surveillance pathway
    102486459
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102486459
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102486459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102486459
   03041 Spliceosome [BR:tup03041]
    102486459
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102486459
    TREX complex
     102486459
Spliceosome [BR:tup03041]
 Complex C
  Other components
   EJC/TREX
    102486459
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102486459
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 102486459
NCBI-ProteinID: XP_006167041
LinkDB
Position
Un
AA seq 253 aa
MIRSSADGSPSRRGTETRLRARHGQQRVDLSLEDIIKLRSQRHPGRSKEPRAAFPEKRGG
TGHMHPRPAPYSRSRRLRDQRQHLVADRGFGDGAGAQSRGQLLLLSNLHPSVSDRDIQML
FGEFGALQKQAAVHYDGSGHSLGTATVHFQQKADALKALREYNGVPLDGRPLIIQLVTSP
GDTLKRPISSGNGGSLDGKHHAGGSARGCSSWLGSRRGQQVPVHPSKQQLSAEELDAQLD
AYKAAALAENVQL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgattcggtcctctgctgacggatccccaagcagaaggggaactgagacccgactccga
gcccgccatggccagcaacgtgtggatctgtctctggaggacatcatcaagctccgcagc
cagcggcaccctggtcgcagcaaggagccaagggccgccttccctgagaagcgaggaggc
acaggtcacatgcacccaaggccagcaccttacagcaggtccaggcgactccgagaccag
cgtcagcacctcgtggcagaccgcggcttcggagacggtgcaggcgcccagtccagaggg
cagctgctgctgctgtccaacctgcaccccagtgtgtccgacagggatatccagatgctc
tttggcgaattcggagcgctgcagaagcaggcggcggtgcactacgatggctctggccac
agcttgggcacagccaccgtgcacttccagcagaaagccgacgccctgaaggcactgaga
gagtacaacggtgtccctttggatggccgacccttgataatccagctggtcacctcgccc
ggggatacgctgaagagacccatctccagtgggaacggaggcagcctagacgggaagcac
cacgcaggaggttcagctcgtggctgcagctcctggctaggcagcaggagaggacagcaa
gtcccagtccacccttccaagcagcagctttctgcagaggagctggacgcccaactcgat
gcctacaaagctgccgctcttgccgaaaatgtccaactttaa

DBGET integrated database retrieval system