Tupaia chinensis (Chinese tree shrew): 102486959
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Entry
102486959 CDS
T02978
Symbol
HIF1A
Name
(RefSeq) hypoxia inducible factor 1 alpha subunit
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04066
HIF-1 signaling pathway
tup04137
Mitophagy - animal
tup04140
Autophagy - animal
tup04148
Efferocytosis
tup04659
Th17 cell differentiation
tup04919
Thyroid hormone signaling pathway
tup05167
Kaposi sarcoma-associated herpesvirus infection
tup05200
Pathways in cancer
tup05205
Proteoglycans in cancer
tup05208
Chemical carcinogenesis - reactive oxygen species
tup05211
Renal cell carcinoma
tup05230
Central carbon metabolism in cancer
tup05231
Choline metabolism in cancer
tup05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
102486959 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102486959 (HIF1A)
04137 Mitophagy - animal
102486959 (HIF1A)
04148 Efferocytosis
102486959 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102486959 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102486959 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102486959 (HIF1A)
05205 Proteoglycans in cancer
102486959 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
102486959 (HIF1A)
05230 Central carbon metabolism in cancer
102486959 (HIF1A)
05231 Choline metabolism in cancer
102486959 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
102486959 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
102486959 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
102486959 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102486959 (HIF1A)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102486959 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
102486959
NCBI-ProteinID:
XP_014448443
LinkDB
All DBs
Position
Un
AA seq
854 aa
AA seq
DB search
MSRSSTAAVCTRCFRSFPPPSSRVPLKARPRGGPCTLVLASQISSERRKEKSRDAARSRX
SKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDLDIEDEMKAQMNC
FYLKALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTH
RNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQSQC
GYKKPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEEL
LGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNS
QPQCIVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKL
KKEPDALTLLAPAAGDTIISLDFGSNDTETDDQQLEEVPLYNDVMLPSSDEKLQNINLAM
SPLPASETPNPLXSSADPALSQEVALKLEPNPESLELSFTMPQIQDQPASPSDGSTRQSS
PEPNSPSEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYIPMDD
DFQLRSFDQLSTLESSSSSPQSVSSTIPVFQQTQMQEPAINTTKTTATPDELKTVTKDGM
EDVKILVASPSPTHIPKETTSATTSPYKDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLS
VTLSQRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGTLLQQPDDRTTTTSLSW
KRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNL
LQGEELLRALDQVN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagctcgaccgccgcggtttgcacccggtgcttccgctccttcccgccccca
tcctctcgggttcctttgaaagctcggccccggggcggaccctgcaccctggtcctggct
tcgcaaataagttctgaacgtcgaaaagaaaaatccagagatgcagccagatctcggtga
agtaaagagtccgaagttttttatgagcttgctcatcagttgccacttccccataatgtg
agctctcatcttgataaggcttctgttatgaggcttaccatcagctatttgcgtgtgagg
aaactcctggatgctggcgacctggatattgaagatgaaatgaaggcacaaatgaattgc
ttttatttgaaagccttggatggttttgttatggttctcacagatgatggtgacatgatt
tacatttctgataatgtgaacaaatacatgggattaactcagtttgaactaactggacac
agtgtgtttgattttactcatccgtgtgaccatgaggaaatgagagaaatgcttacacac
agaaatggacctgtgaaaaagggtaaagagcaaaacacacagcgaagcttttttctcaga
atgaaatgtactctaactagcagggggagaactatgaacataaagtctgcaacatggaag
gtacttcactgcacaggccatattcatgtgtatgataccaacagtaaccaatctcagtgt
ggatataagaaaccacccatgacgtgcttggtgctgatttgtgaacccattcctcatcct
tcaaatattgaaattcctttagatagcaagacttttctcagtagacacagtctggatatg
aaattttcttattgtgatgagagaattactgaattgatgggatatgagccagaagaactt
ttgggccgctcaatttatgaatattaccatgctctggattctgatcatctgaccaaaact
catcatgatatgtttactaaaggacaagtcaccacaggacagtacaggatgcttgccaag
agaggtggatatgtctgggttgaaactcaagcaactgtcatatataacactaagaactct
caaccgcaatgcatcgtgtgtgtaaattacgttgtaagtggtattattcagcacgacttg
attttctcccttcaacaaacagaatgtgtcctcaaaccggttgaatcttcagatatgaaa
atgactcagctattcaccaaagttgaatcagaagacacaagtagcctttttgataaactt
aagaaggaacctgatgctttaactttgctggccccagctgctggagacacaatcatatct
ttagattttggcagcaatgacacagaaactgatgaccagcaacttgaggaagttccattg
tataacgatgtaatgctcccttcatccgatgaaaagttacaaaacataaatttggcaatg
tctccattacctgcatctgaaactccaaatccactttgaagtagtgctgaccctgcactc
agtcaagaagttgcattaaaattagaaccaaatccagagtcattggaactttcttttact
atgccccagattcaagatcagccagccagtccttctgatggaagcactaggcaaagttca
cctgagcctaacagtcccagtgaatattgtttttatgtggacagtgatatggtcaatgaa
ttcaagttggaattggtagaaaaactttttgctgaagacacagaagcaaaaaatccattt
tccactcaggacactgacttagacctggagatgttagccccctatatcccaatggatgat
gacttccaattacgctcctttgatcaactgtcgacattagaaagtagctcttcaagccct
caaagcgtgagcagcacaattccagtatttcagcagactcaaatgcaagaacctgctatt
aacactaccaagaccactgcaactcctgatgaattaaaaacagtgaccaaagatggtatg
gaagatgttaaaatactggttgcatctccgtctcctactcacatacctaaagaaactact
agtgccacaacatcaccatataaagatactcagagtcggacagcctcaccaaacagagca
ggaaaaggagtcatagaacagacagaaaaatctcatccaagaagccctaacgtgttatct
gtcactttgagtcaaagaactaccgttcctgaggaagaactaaatccaaagatattggct
ctgcagaatgctcagagaaagagaaaaatggaacatgatggttcgctttttcaagcagta
ggaattggaaccttattacagcagccagatgatcgtacaactactacatcactttcttgg
aaacgcgtaaaaggatgcaaatctagtgaacagaatggaatggagcaaaagacaattatt
ttaataccctcagatttagcatgtagactgctggggcaatcaatggatgagagcggatta
ccacagctgaccagttatgattgtgaagttaatgctcctatacaaggcagcagaaaccta
ctgcagggtgaagaattactcagagctttggatcaagttaactga
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