Tupaia chinensis (Chinese tree shrew): 102487369
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Entry
102487369 CDS
T02978
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting 13 homolog A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102487369 (VPS13A)
Membrane trafficking [BR:
tup04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102487369 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
102487369
NCBI-ProteinID:
XP_014442113
LinkDB
All DBs
Position
Un
AA seq
3171 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWRGAVALKNLEIKENALSQLDVPFKDKVG
HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQKELKRIED
AKQKVVDQEHHREEKQDTFAEKLVTQIIKNLQVKISDIHIRYEDDITNRDKPLSIGISLQ
NLSMQTTDQYWIPCLHDETEKLVRKLIRLDNLFAYWNVNSRMFYFNNYDESLDSLRDGIV
KENIVPVGYDFVFRPISANAKLQINRRSDFDFSSPKINLDVELHNIAIEFNKPQYFSVME
LLESIDMMTQNLPYRKFKPDVPLHHHAREWWAYAISGVLEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPAGEILMSLEELEKALDVFNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNKGWFGWLWTWSESSTKEEPDIKPGILEEMLTPEEKALLYEAIGYSETAVDPTL
PKTFEAVKLSIHLKSMSIVLREKEQTPELLDIIIEEFSTLIVQRPGAQAIKFETRIDSFH
VTGLPDDLEKPRLLSSLDDAMSLFQITFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKDVHLEQLTSATLTKLEEFRDKTATGLLYIIETQKVLYLKINLKASYIIVPQD
GIFSPTSNLLILDLGHLKVTSKTRSELPDVKQGGANLEEIMHRAYDSFDVQLTSIQLLYS
RVGDNWKEARKLNVSTQHILVPMHFNVELSKAMVSMDLRMPKFKIFGKLPLVCLRISDKK
LQGIMELVESIPKPEFGAEVSAPAKSFQISTATLGTAQISQKIIPLLELQSVSEDDSEEE
FYDAPCSPLEESLQFPSSAKCIRHKKLQKRDGVKNMTELKMLFEVVEVLIQFYHLVGDCE
LPVIEIDLLGLGTGIEIRTFDLKANAFLKEFCLKCPEYSDVNKKPVYLITTLDNTMEDLL
TLEYVKAEKNVPNLKSTYNNVMQLLKVNFSSLDIHLHTEALLNTINYLNNIFPQSEEKPA
SVPTVESEDRGDVIKKLALKLSTNEDIITLQILAELSCLRIFIQDQKRNISEITIEGLDS
EMIMRCSVTEINAKLRNIIILDSDMTAIYKKAVYITGKEVFSFKMINYMDATAGSAYTDM
NVVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPISQNVFVADFGLITMTNTFHMITESQSNPPPVIDLITI
KLSEMRLYRSQFIKDKYQEVLDLLLPLNLEVVVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDITTIFKTLYGNIWYEEGGSAVPAASKEQSSDTVGNANALYPSEGATMVTAAVVEV
HSRASQVKTTLNMSFRTDYLTMVLYSPGPEETCFTDVRDPSLILAEFKLENIISTAKMYT
DDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDSCVTDAVFQ
EMYICASVEFLLTVANVFFEAYTTGSVVETSVQSWTSKEEVPVQQPEKWEINTIIKNPEI
VFVADMTKNDAPALVITTQCEICWRGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVL
QPCDLFYQATQIGTDPQVIDISVKSLTLKVSPVIINTMITITSALYTNKEAVPEESAASV
AHLWEMMDTKNLKMWFLEESNESDRIPPTADLVPKGEKIKVNIDSIFLVLEAGIGHRTVP
MLLAKSSFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWKLG
IKMKKKAKQAIVESDTEEENYKVPEYKTVITFYSKDQLNITLSKCGLVMLNNLAQAFTEA
ATGSSAGFIRDLAPFMIVNSLGLTISVSPSDSFSVLGVPMAKSYLLKNEESLSMDYVRTK
DNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDA
VEGSKKITIRSPVQIRNHFSVPLCVYEKDALLGTASPENEFNIPLESYRSLLYLKPEDED
YQICEAIDFEEIIKYDGELLKKRCRSINPSKKSFIMNIVPEKDNLTSFSVYSEDGWDLPY
VLHLWPPILLRNLLPYKIAYYVEGIENSVFTLSEGHSAQICTVQLDKARLHLKLLDYLNH
DWKSEYHIKPNQQDISFISFTCVTEIEKTELDIAIHVTYNTGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPDYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGPNMEYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHVSVAEEGNDKWLSLELDQC
IPFWPMDASSKLLVQVEGSEDPPKRIYFNKQENCILLRLHNELGGIIAEVHLAEHSTVIT
FSDYHDGAATFLLINHTKSDLVQYKQSSLSDIEDSLPPGKAVFYTWADPVGSRKLKWRCG
KSHGEVTQKDDMMTPIESGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQE
IGLSLQDVGISLVNNYTKQEVAYIGITSSDVVWETKLKKKARWKTMSVKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRLTPSGNNMKILQPHVVAIRRNYLPALKVEYSTSAHQSSF
RIQIYRIQIQNQIHGAIFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALADLVTEAETTENTEVELFHKDIEAFKEDYKTDSLVDQSQV
SLYEYFHISPIKLHLSVSLSSGREAAKDPEQHRGLIPLHSLNLLLKSIGATLTDVQDVVF
KLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAITMDEDFQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQ
VMENGRFAKYKYFTHVMINKTDMLMITRRGILFVTKGTFGQLTCEWQYSFDEFTKEPFIV
HGRRLRIEAKERVKSVFHAKEFGKIVNFKTPEDARWILTKLEEAREPSPNL
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctctccctgggcatctggagaggagctgtggccctcaagaac
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagataaagttggt
catataggtaatcttaaacttataattccatggaaaaacctttatacccaaccagtagaa
gctgtattggaagaaatttatttactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagaaaagcaacttatggaagcaaagcaaaaggaattaaaaagaatagaagat
gcaaaacagaaagtagtcgatcaagaacaccatcgggaggagaaacaggatacttttgca
gaaaaattagttactcaaatcataaaaaatcttcaagtgaaaatttctgatatccatatt
cgttatgaagatgatattacaaatcgagataaaccgctgtcgattggtatttcccttcaa
aatctcagcatgcagacaactgatcaatattggattccatgtttacatgatgaaactgag
aaacttgttcgtaagctaatccgattggataacctttttgcctattggaatgtgaattct
cggatgttttattttaataattatgatgagtcattggacagcttgagggatggcattgtc
aaggaaaatattgttccagtaggatatgattttgtatttcggcccatatctgctaatgcc
aaacttcagataaatcgccgatcagattttgacttttcttcccccaaaataaacttggat
gttgagttacataacatagcaattgaatttaataaaccacagtatttcagtgttatggag
cttcttgaatcaattgacatgatgacacaaaatctgccatatagaaaattcaaaccggat
gtacctcttcaccaccatgccagggaatggtgggcttatgctatatctggtgttcttgaa
gtaaatgtttgccccagactgcggatgtggtcatggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagccagctggt
gaaattctcatgtctttggaggagttggaaaaagctcttgatgtctttaatataactata
gctagacaacaggcagaagttgaggtaaagaaagctggatacaagatttacaaagaaggg
gtaaaagacccagaggataataaaggatggtttggttggctgtggacttggtcagaatca
agtactaaagaggaaccagatattaaacctggaattcttgaagaaatgttaacccctgaa
gaaaaagctttactctatgaagcaattggctacagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagctgtgaagttgtctattcacttgaaaagcatgtccattgttctg
cgagaaaaagagcaaactcctgagctgttggatatcataatagaagagtttagcactttg
attgtgcagagaccaggagcacaagcaataaaatttgaaaccagaatagattcgtttcat
gttactggcttaccagatgacttagaaaaacctcgcctcttgtcttcactagacgatgct
atgtcactcttccagattacatttgagataaatccactagatgaaactgttgctcaaagg
tgtatcattgaagctgaacctttagaaatgatatatgatgctagaacagtgaatagtata
gtggaattcttcagacctccgaaagatgtacacctagaacagctcacttctgcgactttg
acaaaactggaagaatttcgagataagacagcaacaggtctcctatatattattgaaaca
cagaaagttctctatctcaaaattaatttgaaggcttcatatattattgtcccacaagat
ggaatttttagtcctacatcaaatctacttattttggatcttggtcatctaaaggtgaca
agcaaaactcgctcagaattaccagatgtcaaacaaggtggggccaatcttgaagagata
atgcatagagcttatgattcctttgatgttcagcttacaagcatacaactgctttacagc
agagttggtgataattggaaagaagcacgaaaactcaatgtttccacacagcatattttg
gtacccatgcacttcaacgtggaactgtcaaaggccatggtttccatggatttaaggatg
cctaaattcaagatttttggaaagttacctctcgtttgtttacgaatctcagataaaaaa
ctgcaagggattatggaattggttgaaagcattccaaaacctgaatttggagctgaagta
tctgcccctgctaagtcctttcagatttcaactgctactttgggaacagcacagatttca
cagaaaataattcctctcttggaacttcagtctgtttctgaagacgattcagaggaggaa
ttttatgatgcaccatgtagtcccttggaagagtctcttcaatttccatcctcagctaaa
tgtattcgacacaaaaagttacaaaagcgagatggtgtaaaaaatatgactgagttaaaa
atgctgtttgaagtagtggaggttttgatccagttttaccacctggttggagattgtgaa
ctacccgtgatagagattgatcttttaggcttgggcacaggaattgaaattagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagagtactctgat
gtaaataagaagccagtttatttgattacaacactggataacacaatggaagatctgtta
acattggaatacgtgaaggctgaaaagaatgtacccaacttaaaaagtacctataacaat
gtcatgcaactgcttaaggttaatttttcctctttggacattcatttacacactgaagca
cttctgaatacaataaattatctgaataatatctttccacaatcagaggagaaaccagcc
tcagtgcctactgtggagagtgaagacagaggagatgtcattaaaaaattagctttaaaa
ctatccacgaatgaagatattattaccttgcagattttagcagagttatcatgtttacgg
atctttattcaagaccagaaacgcaacatttcagaaattacgatcgaagggcttgattct
gagatgattatgaggtgttcagtaacggaaatcaatgcaaagctgaggaatataatcatt
ttggattctgatatgacagctatctacaaaaaggctgtttatatcaccggaaaagaagtt
ttcagcttcaaaatgattaattacatggatgcaactgctggttctgcatacacagatatg
aatgtggttgacgttcaggttaatttaactgttggttgcatcgaagtagtttttgtcaca
aaatttctgtattctatattggcttttatagataactttcaagcagctaaacaggcgttg
gcggaggcgactgtccaggcggcaggaatggctgctactggtgtcaaagaactggcacag
cggagttcccggatggcactggatgtgaacatcaaggccccagtcgtggtcatcccacag
tcaccgatttctcaaaatgtttttgtggctgattttggactaattacaatgacaaataca
ttccatatgataacagagagccagagcaaccccccacctgttatagatttgataacaata
aagctgagtgaaatgcgactctacaggtctcaatttattaaagacaaatatcaagaagta
ctggatctgttattgccattaaatcttgaagtggttgtggagcgaaatttatcctgggag
tggtaccaggaagttccttgctttaatgtaaatgctcagctaaaacccatggagttcatt
cttagccaagaggacataacaactatttttaaaactttgtatggcaacatatggtatgaa
gaaggtggtagtgccgtacccgctgcatcgaaagagcaaagcagcgatactgtcggaaat
gctaacgctctgtacccgtcagaaggagcaaccatggtgacagctgctgtggtagaagtg
cattcacgtgcctctcaggttaagacgacactaaacatgagtttcagaactgattatctt
accatggtactatacagtccaggtcctgaagagacttgctttacagatgttcgtgatcct
tctctgatacttgctgaatttaaattggaaaatattataagtaccgcaaaaatgtacaca
gatgactcaacattctcttctttctcattaaaaaactgcattttagatgataaaaggcct
catgtcaagaaagcaactcctcgaatgataggactgacagttgggtttgacaagaaggac
atgatggatgtcaagtacaggagagtcagagatagttgtgtgactgatgccgtctttcaa
gaaatgtatatctgtgcaagtgtggaatttttgctgaccgttgccaatgtcttttttgag
gcctacaccacaggcagtgttgtagaaaccagtgttcagtcatggacttcaaaggaggaa
gtacctgtacagcaaccggaaaagtgggaaattaatactattattaaaaatcctgaaatt
gtgtttgtggctgacatgacaaagaatgatgctcctgccttagttattacaacacagtgt
gaaatttgctggcgaggtgaccttgaaaacaatacaatgactgctgccattaaagatctt
caagtgagggcatgcccatttcttccagtcaagagaaaaggcaaaatcactactgttttg
cagccctgtgatttgttttatcaggctactcagataggtacagatccacaagtgattgat
atatcagtaaaatccctgacactgaaggtgtcaccagttatcataaataccatgatcacc
ataacttcagcactttacacaaacaaggaagctgtccccgaagaatcagcggcttctgta
gcacacttatgggagatgatggacacgaagaatctgaaaatgtggtttcttgaagagtca
aatgaaagtgatagaatacctcccacagctgacttggtacctaaaggagagaagataaaa
gtgaacatcgattccatctttctagttctcgaggctggaattggccacaggacagttcct
atgctgttggcaaagtcaagtttttcaggggaaggcaaaaactggagttccctaataaat
ctccactgtcagctggagctggaggtacattattacaatgaaatgtttggtgtatgggag
cctttgcttgaacctttagagattgatcagactgaggattttagaccatggaagcttgga
atcaagatgaaaaagaaagcaaaacaggccattgttgagtcagatactgaagaggaaaac
tataaagtaccagaatataaaacggtcatcactttctattcaaaagatcaattaaatatt
acattatccaaatgtggccttgttatgttaaataatttagcccaggcatttacagaagct
gccactggctcttcagctggcttcataagggatctagcaccatttatgatcgtaaattcc
cttggacttactatctctgtttcaccaagtgattcttttagtgtactcggtgttcctatg
gcaaaatcatatctattgaaaaacgaggagagtttaagtatggattatgtccgaactaag
gacaatgatcacttcaatgcaatgaccagtctaagcagcaaactcttcttcattcttctt
acacctgttaatcactctactgccgataagattcctttaacaaaagtgggacgacgtctg
tacactgtaaggcacagagagtcgggagttgaaagatctatcgtttgtcagatcgatgca
gtagaaggaagtaagaagataacaattcgctccccagtgcagattagaaatcatttttca
gtcccactctgtgtttatgaaaaagacgctttattgggaactgcttcacctgaaaatgaa
ttcaacataccattagaatcttaccgatcactcctttacctgaagccagaggatgaggac
tatcaaatatgtgaagcaattgactttgaagaaattataaaatatgatggagagcttcta
aagaagagatgtagatctataaatccttcgaagaaatcatttatcatgaatattgtccca
gaaaaagataatttgacatctttttctgtgtattcagaggatggttgggacttaccatat
gtactgcacttgtggccacctatcctactccgcaatcttcttccttacaaaattgcttat
tatgttgagggaattgaaaattcagtttttactctcagcgaaggacattcagcccagatt
tgtactgtgcagttggataaagccaggctacatttaaaattactggactaccttaatcat
gattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagtttt
acatgtgttacagaaatagaaaagactgaattagatatcgctatccatgtaacttacaat
actggtcagacagtcgtggcatttcatagcccttactggatggtgaacaaaactggtcgc
atgttacagtacaaagcggatggaattcatcgaaagcatccacctgactataaaaagcca
gttctcttttctttccagccaaatcacttttttaataacaataaggttcagcttatggtg
actgacagtgagttatcagaccagttttcaatcgacactgttggtagtcatggagctgtt
aaatgtaaaggcccaaacatggaatatcaagttggtgttactatagatctcagcagtttt
aacattaccagaattgtgacttttactcctttttatatgattaaaaacaagagcaaatac
cacgtatcagtggctgaagagggaaatgataaatggctctctcttgagttggatcagtgt
attcccttttggcctatggatgcttctagtaaacttcttgttcaagttgaagggagtgaa
gatcctcccaaaaggatatattttaacaagcaagagaattgtattttattgcgcctgcat
aatgagcttggaggtattatagcagaggttcatttggctgagcattctacagttattaca
ttttcagattatcatgacggagcagctacatttctgttaataaatcacaccaagagcgac
cttgttcagtacaaacaaagttctctcagcgacatagaagattccctccctcctggaaaa
gcagtgttttacacatgggctgatccagtgggctccagaaagctgaagtggagatgtggg
aaaagccatggcgaagtaacacaaaaggacgatatgatgacacctatagaatcggggaaa
aaaactatttatttagtttcattctttgaaggcttacagcgcattattttattcactgaa
gatccaagggtatttaaagtaacatatgaaagtgagaaagcagagttagctgaacaagaa
attggattgtcattacaagatgttggaatttctcttgtcaacaattatacaaagcaagaa
gtagcctatataggcattacaagctctgatgtggtttgggagacaaagctcaagaagaag
gcaagatggaagacaatgagtgtaaagcacactgagaagttagaaaaagaatttaaggaa
tatactgaatcctcaccttcagaagataaggttattgaattggacaccaacattccggtt
cgcttaacacctagtggtaataacatgaaaattctgcaaccacacgtagtagctatacga
agaaattatcttccagcattaaaagtggaatatagcacctctgcacatcagtcatcattt
agaatacagatttacagaatacagatccagaaccagatacatggtgctatatttccattt
gtgttttatccggttaagcctccaaagtcagtcaccatggattcagcaccaaagcccttc
acagatgtcagcattgtcatgagatctgcaggacattcccagatatcacgtattaagtat
ttcaaagtgttgattcaagaaatggatttgagattggatcttgggtttgtctatgcttta
gcagaccttgtaacagaagctgagacgactgaaaacacagaggttgaactttttcataaa
gatatagaagctttcaaagaagattataaaacagattcattagtagatcaatcacaagtc
agtctctatgaatattttcatatatctcctattaagttacatttaagtgtctcactgagt
tcgggtagagaagcagctaaagatccagaacagcatagaggactgattccacttcattct
ttaaatcttttgctgaagagtattggtgccactctgacagatgtgcaagatgtagttttt
aagcttgcattttttgaactcaattaccagttccatacaacatctgaactacagtctgaa
gtaatcaggcactattcaaaacaggccattaaacagatgtatgtactcattcttggactt
gatgttttgggaaatccctttgggttgattagagaattttctgaaggtgtagaagcattt
ttttatgaaccttatcagggagccatccaaggtccggaggagtttgtagagggaatggca
ctgggacttaaggcactggttggtggagctgttggtggattagctggtgctgcctccaaa
atcaccagtgctatggccaaaggtgtagcagctataactatggacgaagacttccaacag
aagagaagagaagccatgaataagcaaccagctggacttagagaagggatcacacgtgga
ggaaaaggcttagtttctggctttgtaagtggcataacaggaattgttacaaaacccatc
aaaggagctcaaaaagaaggagcagctggcttctttaaaggtgttgggaaaggtttagtt
ggagcagtggcgaggccaactggcggcatcatagacatggccagcagcacatttcaggga
ataaagagagctacagagacttctgaagtggaaagtctgcgacctcctcggttctttaat
gaagatggagttatcaggccttacaggttgagagatggcactggaaatcaaatgttgcag
gtcatggaaaatggaagatttgcaaaatacaaatatttcacgcatgtcatgatcaataaa
acagacatgttaatgataaccagacgtggtatattgtttgtaacaaagggaacatttgga
cagcttacatgtgaatggcaatatagttttgatgaatttaccaaagagccattcattgtt
catgggagaagactgcgcattgaagcaaaggaacgggtgaagtctgtatttcatgccaaa
gagtttggaaaaatagttaacttcaagactccagaggatgctaggtggatcctcacaaag
ctagaagaagcaagagagccttctccaaacctctga
DBGET
integrated database retrieval system
