Tupaia chinensis (Chinese tree shrew): 102488274
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Entry
102488274 CDS
T02978
Symbol
TRMT13
Name
(RefSeq) tRNA methyltransferase 13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tup03016
]
102488274 (TRMT13)
Enzymes [BR:
tup01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102488274 (TRMT13)
Transfer RNA biogenesis [BR:
tup03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102488274 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
RecX_HTH3
Motif
Other DBs
NCBI-GeneID:
102488274
NCBI-ProteinID:
XP_006172426
LinkDB
All DBs
Position
Un
AA seq
481 aa
AA seq
DB search
MAAFAPMPQATGIPAENRCNYYVEKKKRFCRMVVAAGKKVCGEXAGAAEEENSRKRILCP
LDPKHTVYEDQLTKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISSLSEEQLE
NLIKKLKKASEGFNSSLKDCVMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPVLKEGKLPVVGIGKHLCGVATDLALRCLIETYAANCEERNEEPLAKRVK
NDKTDTEINSLAKEGNEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGALE
FHYFQRMSSWATCGMRKTSLDASNITTRRSDHQNDDSEEHEDGGYRIIDDSATSLPGLLT
VEEKKKIGQLCKLLIDQGRIQYLQRKGFSPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttttgcgccgatgccgcaggcgactggtattccagctgaaaatagatgcaat
tactatgtggaaaagaagaagcggttctgcaggatggtggtggctgcggggaaaaaggtt
tgtggtgaancagctggcgcggcggaggaagaaaattctcggaaaagaatcctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactgacaaagcatttgaaaaaatgtaac
tcaagagaaaagccgaaacctgatttctttattcaggatattaacgcaggcttaaaagat
gaaacagaaatacccgaacaattagtaccaatttcttctctatctgaagagcagttggaa
aacttaattaagaagttgaaaaaagccagtgaaggtttcaattcgtcacttaaagattgt
gttatgtcccacccagcattacacgatgcccttaatgaccctaaaaatggggattctgca
accaagcatctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcgggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgactaca
agattcaaggtagatggtaaacacagaaagaaaaattcagtgtttgaaagacttcaaatt
gatattcaacacttgtgtttgaataagattcctgtactaaaagaaggaaaactacctgtg
gtaggaattggaaagcatctgtgcggtgtggcaacagatcttgcattacgatgtttgatt
gaaacctatgctgccaattgtgaggaaaggaatgaagaacctttagccaaacgcgtaaag
aatgataaaacagacacagaaattaactctttggccaaggaaggaaatgaaaaaaatgtc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgttggcaaagaatattttagggcgttaggccttggagcactggaa
tttcactatttccagcgaatgagtagttgggcaacttgtggaatgcggaaaacatctttg
gatgcttcaaatattaccacaaggagaagcgatcatcagaacgatgatagtgaagaacat
gaagatggaggatataggatcatagatgacagtgctactagtttgcctgggcttcttact
gttgaagaaaagaagaaaataggacagctttgtaaactgctgattgaccaaggccgaatc
cagtatttacagcggaagggattcagtcctgctttacagtactatacagaccctttagta
tcattggaaaatgtgttgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcctaa
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