Tupaia chinensis (Chinese tree shrew): 102488412
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Entry
102488412 CDS
T02978
Symbol
PABPC4L
Name
(RefSeq) poly(A) binding protein cytoplasmic 4 like
KO
K13126
polyadenylate-binding protein
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03015
mRNA surveillance pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102488412 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
102488412 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102488412 (PABPC4L)
03041 Spliceosome [BR:
tup03041
]
102488412 (PABPC4L)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102488412 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
102488412 (PABPC4L)
Spliceosome [BR:
tup03041
]
Complex C
Other components
Complex C specific factors
102488412 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_Nup35
RRM_7
RBD_DEAH11
RRM_10
RRM_3
RRM_MARF1
RBD_RDR6
Nup35_RRM_2
YflT
Motif
Other DBs
NCBI-GeneID:
102488412
NCBI-ProteinID:
XP_006153442
UniProt:
L9KMT7
LinkDB
All DBs
Position
Un
AA seq
370 aa
AA seq
DB search
MNVEAKYRMASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSA
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREA
ELRNKASEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGFVSFDNH
EAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQGVKLYIKNL
DDTIDDEKLRKEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEEATKAMTEMNGQILGSK
PLNIALSQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgaagccaagtaccgcatggcctccctgtatgtcggtgacctctctgcggat
gtcactgaggatctgctgttcaagaagttcagcactgtggggcctgtgctgtctatccgt
atctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaacttcttgcag
ttggctgatgcccagaaggctctggacacgatgaactttgacatgataaaaggcaaatcc
atccgtctcatgtggtctcaacgtgatgcctgcttaaggaaatctggaattggtaacgtg
ttcatcaagaatctggatagatccatcgataacaaaaccctttatgaacacttttcagct
tttggaaagatcctatcttccaaagtgatgagtgatgaccaaggctccaaaggttatgca
tttgtgcactttcagaaccagagtgctgcagacagagccattgaggaaatgaatgggaag
cttctcaaggactgcaaagtgtttgttggcagattcaaaaaccgcaaagatcgggaagcc
gaactcagaaacaaagccagtgaattcaccaacgtttacatcaaaaactttggagatgac
atggatgatgagagactgagagaagttttcagcaagtatggcaaaactctgagtgttaag
gtgatgacagatcccagtgggaaatccaaagggtttggctttgtgagttttgacaaccac
gaagctgcccaaaaggctgttgaagaaatgaatggaaaggacataaatgggcaactgatt
tttgtaggccgggcacaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgag
caacagaaaagggaaagaattcgtaagtgccagggagtaaaactctacattaagaacctt
gatgacacaattgatgatgaaaaactacgaaaggaattttcttcatttggatcaattagc
agagttaaggtaatgcaggaggaagggcaaagcaaagggtttggcttaatctgcttctcc
tctcctgaggaggccactaaagcaatgactgagatgaatggccagatcttgggttccaaa
cccctcaacattgccttgtcccagaagcattag
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