Tupaia chinensis (Chinese tree shrew): 102488507 Help Entry 102488507         CDS       T02978                                  Symbol SETX Name (RefSeq) senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:tup00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102488507 (SETX)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tup03021]     102488507 (SETX) Enzymes [BR:tup01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      102488507 (SETX)     5.6.2.5  RNA 5'-3' helicase      102488507 (SETX) Transcription machinery [BR:tup03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      102488507 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 UvrD-helicase AAA_30 AAA_22 ResIII SLFN-g3_helicase AAA_16 Helicase_RecD TniB nSTAND3 UvrD_C_2 Motif Other DBs NCBI-GeneID:  102488507 NCBI-ProteinID:  XP_006164383 LinkDB All DBs Position Un AA seq 2677 aa AA seqDB search MSTCCWCTPGGTSTVDFLKRYASKTLPSEFQTADEDLCYCLECVAEYHKARDELPCLHEV LWELETSRLINYFEKSMKAEIGDDDDLYIVDNKGETHLFDFTGQDFENKLRVPLLEILKY PYLLLHERVNELCVEAICQMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK VDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKNYWLG ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRL GSKVWGQLIDPIEAFQTIINNMSYNREIQNIRSSSARTKLEPESYLDDMVTCSQIVYNYN PEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD LKDLGVAYIVEVIHHLHSEVKDALNQTDAVCDKVTEFFLLILVSVIELHRNKKCLHLLWV SSQQWVEAVVKCAKLPTTAFARTSEKSSGNSKGTAMISSLSLHSVPSNSVQLACVQLIRS LLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAPQ CNTFMDLTPAAKTPPISYNKEESEQIGKKIKKDVYHLENSSPAFSKKPMKADTHQIQGSI SIKANNIIDDDHKPNYKKNLKLEDHFTADACLQQSSKSLFTERVQDKISPGEQKSVKENS SYTQQNYTRNGSERERDREIIMSAHLLTDSSIDCLEKVSISNEDFSGKDHVVSKTFKPKS KAEKEEICAQLSHVIRKQRKKNTVVSNAITLEENLSVPDRENFYSRKDTEVQKGDDFIRN SSLNPKGVLDDNKNGEQKSQNSLLLKKKQLKTEELGIFSSHENTCQRRVVDDRGLVSFIE MTNTSVRMSPLKDPVTVVESRDEEVSKSTGLVSSTLTREQVPGVSPGSDTLTDSQVDRDL HKLSLIAQASVIQFPSDSTQKSSSQLQRKVKDDKRRFTANQIDDGDVCCGQVIIISDSDD EDGDERIVGFEKDIKQDKIHSEIECPERHVSIDNTHVEKKLIKEEETKSPFEDSESQVFE FESQKEVFSVWQDHKLGNNSVQENQKGLHLNYKADTTNDWGYNKDYVSEKVIKKVAEDIE EHAEPDSSISVEELCEIEIKPKRKRFEKPVAEHPRRPSSSVKSEDHSEVLSERDLTENDV KSVDKSATTPSSSIQRATKEASLKKSTPKPRTYSKPARRAPLSKTPKKTHSDSKKGQNKS PNYLSCRTTPAVVPPKKLRQCPEPTSTAERLGLKKGPRRAFELSQRSLECLVQLRDHGKA VGVVDTRKKAKLISPQALSVRNNKDLLTSQDPPSRKQSRPKSQPKRQKLFNYESVDAARA GPQPAPNSDTFVPESDRSDYKGETEVLANSNGKQLLKCMLSEPETVKAKCAAQVTDDTCL LKHCDSIVLNGTVPAKQMLGSTSEDLDPLGGGNLTGRRLEEATLQEGESESNSDMEDDNL FLTQNDPEDMDICSQMDKIIEVVHGKDPFQVGDSVSRPQLESLSGIKCKYKDCVETPKDQ GEYCSRHSEVKAADEDVFRKPGLPPSASKPQRPSTTKVFSSSSTSRTANLSKSLEHMSTL PSALKNKLNGVQSTLKVSQPASLVSQKPVGEVKSPCSVLHPQTPSTSNRQGYKLPFGESK SFSASSPVSILSTQSISETFVKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPVRFQDCG DYFNVFFPLMILNTFETVAQEWISSPNKENFYQLHLRKFPADFKNYWEFVVYLEECELAK QVHPKENDLVFLVPERLNGEKKERERNHVQDLHEYHCGFVHKFRRTSVMRNGKSECSLSI QTQDNLAANLNELVKCVVISSLVTTQRKLKAMSLLSGRNQLARAVLNPNPMDFCTKDLLT TTSERIIAYLKDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLL TENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDI NLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQEMHKRKEFLDQQLDELSRQRALC RGGRETQRQELDENIARVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGL LLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQ EYGYDQSMMARFYKLLEEYVEQNTIGRLPILQLTVQYRMHPDICLFPSTYVYNRSLKTNR VTETNRCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMELIKLIKDKRRDVTFRN IGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGF LASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQRRGAIIKTCDRNYRHDAVK ILKLKPVLQRSLTHPPTMAPEVDRPQGGLPSTKLDSGLATTSFAASPYHTPSDFKEAAVT FTSRDPERLAHDQLRDPRLLRRMSAETRGVLPRDPQSLSPQHPGATPPMGEPGFPVGHQD LGGVGQQSPAGGAAQHSHGPPVQCEPPAAGADASTRERECVDPERGECSHRRETRASSEG ERGRCDSVTHHTKRNSGWDRRRLEEEHGSSKKRKATV NT seq 8034 nt NT seq  +upstreamnt  +downstreamnt atgagcacgtgctgttggtgtacaccgggtggtacctccaccgttgacttcctaaaacgc tatgcatccaagaccctacctagcgaatttcagacagcggatgaagacctgtgctactgt ttagagtgtgtggctgagtaccacaaagcaagagatgaattgccatgtttgcatgaggtt ttatgggaattagaaacctcacgtctcataaattactttgaaaagtccatgaaggcagaa attggagatgacgatgacttatatatagtagacaacaaaggagagacccatctgtttgat tttactggccaagattttgaaaataaactgcgagttcctcttcttgaaatactgaaatat ccttacctgcttctgcatgagcgtgtcaatgaattatgtgttgaagcaatttgtcagatg gaacaagccaattgctcctttcaggtttttgacaaacatccagggatctatttgtttttg gtccatcccaatgaaatggttcggcgttgggctatcctgactgccaggaatctggggaaa gtcgacagagatgattattacgatttacaggaagttttaacttgcctttttaaagtcatc gagttggggcttctagaaagtcccgacatttatacttcttctgtcctcgagaagggtaaa ctgattcttctgccctctcacatgtacgataccaccaactacaaaaactactggttaggt atttgcatgttgctgaccattcttgaggaacaagccatggattcgttattgctgggctca gacaaacaaaatgactttatgcaatcaatacttcacaccatggagaggcagtcggatgat gatagtgtggatcctttttggccagcattacattgtttcatggtgatcctggaccgtctt ggatctaaggtctggggtcaacttattgatcctattgaggcatttcaaactattatcaac aacatgagctacaatagagagatccagaatatacggagcagctctgcaaggaccaagtta gaaccagagtcgtatttggatgatatggtgacttgcagccagattgtatacaattataat cctgaaaagactaaaaaggattcagggtggagatcagccatttgcccagattattgtcct aacatgtatgaagaaatggaaacattagccagtgtacttcaatcagatattggtcaagac atgcgtgtacataacagcacatttttgtggtttataccttttgttcagtccctgatggat ctcaaggatttgggtgtggcttacattgtagaagttattcatcatctgcactctgaagtc aaagacgcccttaaccagacagatgctgtgtgtgacaaagtcactgaattttttctttta attttggtgtcagtgattgaactgcatagaaataaaaaatgtttgcatttgctatgggtt agttcccagcagtgggtggaagctgtcgtaaaatgtgccaaacttcctaccactgcattt gcacgaacttctgagaagtcatctggaaactccaaaggaacagcaatgatatcatccctg tcgttgcattcagtgccgtctaactctgtacagctcgcttgtgtacagctgattagaagt ctccttaaagaaggttatcagcttgggcagcaaactctctgtaagcgattctgggataaa cttaacttattccttcgaggaaatttatctctaggctggcagctgaccagtcaggaaaca catgagttacaaacttgtttaaagcaaattattagaaacataaaattcaaagcacctcag tgtaacactttcatggatctgactcctgcagctaagacccctcctatatcttacaataaa gaagaaagtgaacagatagggaagaagattaaaaaagatgtgtaccacctggaaaattcc agcccagcattttctaaaaaaccaatgaaagcagacacacatcaaatacaaggaagtata tcgatcaaagcaaataatatcatagatgatgatcacaagccaaattataaaaagaatttg aaactggaagatcatttcacagctgatgcatgcttacagcagagtagtaaaagccttttt actgaaagagtacaagataaaataagtccaggggagcagaagtctgtaaaagaaaattcc tcgtatacacaacagaattataccagaaatggttcagaaagggaacgtgacagagaaata ataatgtctgcgcatttgttgactgattctagtattgattgtctggaaaaagtgtccata tcaaatgaagatttctctggaaaggatcatgttgttagtaaaacatttaaaccgaaaagt aaggcagagaaagaggaaatctgtgcacagttatcacatgtaataaggaagcaacgcaag aagaacaccgtggtcagtaacgccatcactttagaggaaaatctgagtgtacctgacaga gagaatttctattcaaggaaagatacagaagttcagaaaggagatgacttcatccgcaat tcatctttaaaccctaaaggtgttttagatgataataaaaatggagaacaaaaatcccaa aacagtttattgctaaaaaagaagcaattaaagactgaagagttaggtattttctcgtct catgaaaacacttgtcaaaggcgtgttgttgatgatagaggtttagtctcatttatagaa atgaccaatacttcagtgagaatgtctcctttaaaagatcccgtgactgtagttgaatca agagatgaggaagtaagtaagagtaccggtctggtttcttccaccttgacaagagaacaa gtccctggcgtcagtcctggatctgacactttaacggattctcaggtagacagagacctc cacaaattatccttaatagcccaagccagtgtaattcagtttccatctgattcaactcag aaaagctcatcccagctgcaaagaaaagtaaaagatgataaaagacgtttcacagctaac cagattgatgatggagatgtctgttgtggacaggttattattatttcagattctgatgat gaagatggggatgaaagaatagtgggttttgagaaggacattaaacaggacaaaatacac tctgagatcgaatgtccagagcggcatgtgtcaatagataatactcacgtggaaaagaag ctaataaaggaagaagaaacaaaatccccttttgaggattctgagtctcaggtttttgag tttgaaagtcaaaaggaggtgttttctgtttggcaagatcataaactaggtaataattca gtgcaagagaatcagaaaggtctacatttgaattataaggctgataccacaaatgattgg ggctataataaagattatgtctctgaaaaggttattaaaaaagtagcagaggacattgaa gaacatgcagaaccagacagtagtatttctgttgaagagttgtgtgaaattgaaataaaa cctaagagaaaacgattcgagaaacctgtggctgaacatcctcgaaggccttcatcttct gtcaaaagtgaggaccattctgaagttcttagtgagagggatcttactgaaaatgatgta aaaagtgtagacaaaagtgccacaactcctagttcaagtattcagagagccactaaagaa gcgtcactaaagaagtctactccaaaacctcgtacttactcaaaacctgctagaagagcc ccactttctaaaacccctaagaaaacacattcagattccaaaaaagggcagaataaaagt ccaaattacctaagctgtagaacaactcctgctgtagtgccgccaaagaaattgcgccag tgtcctgaaccaacttcaacagccgagaggcttggtctgaaaaagggtcctcgtagggca tttgagttgtcccagagatctttagagtgtttagttcagttacgtgaccatggcaaagcg gttggagtagttgatactcgaaaaaaagctaaattaatctctcctcaggctctgtctgtc agaaataataaggacctgctgacaagtcaagatcctccgtcacgaaagcagtcgagacct aagtcacagccgaagagacagaagctttttaattacgaaagtgtagatgctgcaagagca ggaccacagccagcaccgaattctgacacctttgtaccagaatctgatagatcagattat aaaggagaaactgaagtgcttgccaacagtaacgggaagcagttactaaaatgtatgctt tctgagccggagactgtaaaagcgaagtgtgctgctcaggtgactgatgatacttgcctt ttgaagcactgtgattcgatagtgttaaatggaacagtgccagcaaagcaaatgctgggc tctacttccgaggacctggaccctctaggcggaggtaatctaacgggacgtcgtttagag gaggcaactttgcaagagggagaatctgaatccaacagcgatatggaggatgacaattta tttttaactcaaaatgatcctgaagatatggatatatgttcacaaatggataaaatcatt gaagtagttcatggaaaagatccatttcaggtaggagactctgtaagtcggcctcagttg gaatctttgagtggcataaagtgtaagtacaaagattgtgttgaaactccgaaagaccag ggtgagtactgctcaagacactctgaagtgaaagcggcagacgaagatgtgttccggaaa cctggtttacctccttctgcatccaaacctcagagaccttccaccactaaggtttttagc tcaagtagtacttcccgaactgctaatctttccaagtctctggaacatatgtcaacactt ccatcagctctaaaaaataaattgaatggcgtacagtctactttgaaagtctcacagcct gcttccctagtatctcaaaagccagtgggtgaagtgaagagtccgtgcagtgttcttcat cctcagactccaagtacttcgaacaggcaaggttacaaacttccatttggtgaaagcaaa tccttctcagcctcttctccagtaagcattttgtcaacacagtctatctctgagaccttt gttaaagaggtcttaaaatggaagtatgagatgtttttgaacttcgatcagtgtgggccc ccagcaagtctttgtcagtccatctcaagacctgtgcctgtcagatttcaagattgtgga gattattttaatgtttttttccctttgatgatactgaatacttttgaaacagtggcacag gaatggatcagctctccaaataaggagaatttctatcagttgcatttacgaaaatttcct gccgattttaaaaattactgggagtttgttgtttacctggaggaatgtgaactggccaaa caggttcatccaaaggaaaatgatttggtgtttttggttcccgagagattaaatggagag aagaaagagagagagagaaatcacgtccaagatctccacgagtatcattgtggttttgtt cataaattccgccgcacttccgtcatgcgtaatgggaaatctgagtgttccctttccatc cagactcaagataacttggcggccaatttaaatgaactcgtgaagtgtgttgtaatcagt tctctggtaactacccagaggaagttgaaagccatgtctctgttgagtggtcggaaccaa ctggccagagctgtgctgaatccaaaccccatggacttctgtacaaaggatttactgact acaacatctgagagaattattgcttatttaaaagatttcaatgaggaccaaaagaaagca atagaaactgcatacgccatggtgaaacactcaccatcagttgccaaaatatgtttgatt catggaccacctggaacaggaaagtcgaaaactattgttggcctcctataccgcttgctg acagagaaccagaggagggggcattcagatgagaattcaaatgccaaaatcaaacagaac cgtgtccttgtgtgtgcaccttccaatgcagctgtcgatgaacttatgaaaaaaattatc ctcgaattcaaggaaaaatgtaaagacaagaagaatcctttgggaaactgtggagatata aatttagtacgactgggtccagaaaagtctattaataatgaggtcctaaaattcagcttg gacagccaagtcaaccataggatgaagaaagacttaccatctcatgttcaggagatgcat aaaaggaaggagtttttagatcagcagctagatgagctttcccgccagcgagctttgtgc cgaggtggacgagaaacacagagacaagaattagatgaaaacattgccagagtttccaaa gaaaggcaggaacttgcttctaaaattaaagaggttcagggacgcccacagaaaacacag agtatcatcatcttagagtcccatgttatctgctgcacattgagcacaagtggtggctta ctgcttgagtctgcttttcgtgggcaagggggtgtccccttcagttgtgtgatcgttgat gaggctggacagtcttgtgaagtggagactcttaccccactcatccatcgctgcaacaag cttatcctcgtgggagaccctaagcagctccctcccacagtcatttctatgaaagcacag gagtatggttatgaccagtcaatgatggctcgcttctacaaactgctggaagagtacgtg gagcagaacacgatcggcaggctgcccatcttacagctgaccgttcagtacaggatgcac ccagacatctgtctcttcccttccacttacgtgtataacagaagcttgaagacgaacaga gtgactgaaaccaatcggtgttcatcggattggccatttcaaccttaccttgtgtttgat gttggagatggttcagaacgacgggataatgactcatatgtaaatgttcaagaaataaaa ctggtgatggaactaattaaacttattaaggacaaaagaagggatgttactttccggaac attggcataataacccattacaaggctcagaagacaatgattcagaaggatttggacaaa gaatttgatcgaaaaggacctgcagaagtagacactgtggatgcattccagggccgtcag aaggactgcgtcatcgttacgtgtgtcagagcaaatgccacgcaaggctcaattggattc ctggccagtttgcagagattgaatgtcaccattacacgagccaaatacagcctcttcatc cttggacatttgaggaccctgatggaaaaccagcattggaatcatctgattcaggatgct cagaggcgcggggccatcattaagacttgcgacaggaactatcgacacgatgcagtgaag attctgaaactcaagcccgtgctccagaggagtctgactcacccccctaccatggctcca gaggtggacagaccccagggcggcctgcccagcaccaagctcgacagtggacttgccaca acctcctttgctgcttctccttatcacacaccctctgacttcaaggaagcggctgttact tttacctcaagagacccggaaagacttgctcacgaccaactgcgggacccacgactgctt aggagaatgagcgcggagaccagaggggtactcccaagggatccacagtccttgagcccc cagcatcctggagcaacacctcccatgggcgagccgggttttcccgtaggtcaccaggac ctgggtggtgtcgggcagcagtccccagctggaggagccgctcagcacagccacggaccc ccagtgcagtgtgagcctcccgccgctggtgctgatgcttccacgcgtgaaagagaatgc gttgacccagaaaggggggagtgcagtcacagaagagagaccagggcttccagtgaaggg gagcgtgggaggtgtgactctgtgacccatcacacaaagaggaactctggctgggacagg aggagactggaggaggaacacggcagttcgaagaaacgaaaggctactgtatag

DBGET integrated database retrieval system