Tupaia chinensis (Chinese tree shrew): 102488557
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Entry
102488557 CDS
T02978
Symbol
PAPD5
Name
(RefSeq) poly(A) RNA polymerase D5, non-canonical
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102488557 (PAPD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102488557 (PAPD5)
03016 Transfer RNA biogenesis [BR:
tup03016
]
102488557 (PAPD5)
Enzymes [BR:
tup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
102488557 (PAPD5)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102488557 (PAPD5)
Transfer RNA biogenesis [BR:
tup03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102488557 (PAPD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
DUF4283
Motif
Other DBs
NCBI-GeneID:
102488557
NCBI-ProteinID:
XP_006154847
LinkDB
All DBs
Position
Un
AA seq
633 aa
AA seq
DB search
MYRSGERLLGGHALPSEQRDFLPLETTNNNNNHHQPAAWARRAATGPSASSSPSASSSPH
PSSAIPATEPADPASGSSNKRKRDNKASTYGLNYSLLQPSGGRAAGGGRADGSGGVYSGT
PWKRRNYNQGVVGLHEEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGS
FKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSF
TEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKRFLLQRDLNEVFTGGIGSYSL
FLMAVSFLQLHPREDACIPNTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQ
KNMLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNE
TESILGRIIRVTDEVATYRDWISKQWGLQNRPEPSCNGNGVTLIVDTQQLDKCNNNLSEE
NEALGKCRSKTSESLSKHSSNSSSGPVSSSSATQSSSSDVDSDATPCKTPKQLLCRPSAG
NRVGSQDVSLESSPAVGKMQSTQTTNTSNSTNKPQHGSARLFRSSSKGFQGTTQTSPGSL
MTNKQHQGKSNNQYYHGKKRKHKRDAPLSDLCR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccggggagcgcctgctgggcggccacgcgctgccctcggagcagcgggac
ttcttgcccctggagactaccaacaacaacaacaaccaccaccagccagcggcctgggcc
cgccgggctgccacgggcccctcggcgtcctcgtccccttcggcgtcctcgtccccgcac
ccttcgtccgcgatccccgccactgagcccgccgaccccgcctcgggcagcagcaacaag
aggaagcgcgacaacaaggccagcacctacggactcaactacagcctgctgcagcccagc
ggagggagggccgcagggggcggccgggcagacggcagtgggggcgtgtacagcggaacc
ccgtggaagcggaggaactacaaccagggagtcgtgggtctgcatgaagaaatcagtgat
ttttatgaatacatgtctccaagacctgaggaggagaagatgcggatggaggtggtgaac
aggatcgagagcgtgatcaaggagctctggcccagtgctgatgtccagatatttggaagt
tttaaaactggcctgtatttacctactagtgacatcgatcttgtggtgtttggaaagtgg
gagaatctacccctctggaccctggaagaagctcttcggaaacataaagttgcagatgag
gattcagtgaaagttctagacaaggcaactgtacctattatcaaattaacagattctttt
actgaagtgaaagttgatatcagctttaatgtacagaatggcgtgagagcagctgacctc
atcaaagattttaccaagaaatatcctgtattgccatatttggttttagtattgaaacga
ttcttattacagagggaccttaatgaagtatttacaggtggaattggttcttatagtctc
tttttaatggctgtcagcttccttcagttacatcctagggaagatgcttgcatccccaac
acaaactatggtgttctcttaatagaattttttgaattatatggacgacacttcaattat
ttaaagactggcatccggataaaggatggtggttcatatgtggccaaagatgaagtacaa
aaaaatatgctagatggctacaggccatcaatgctttatattgaagatcctttacaacca
gggaatgatgttggaaggagttcatacggggccatgcaagtgaaacaggcctttgattac
gcctacgttgttttgagccatgccgtatcgccaatagcaaagtactatcccaacaacgaa
acagagagcatattaggtagaataattagagtaacggatgaagtcgccacgtatagagat
tggatatcaaagcagtggggcttgcagaataggcctgagccttcatgcaacggaaatggt
gttaccttgatagtagatactcagcagttagataaatgtaataataatctatctgaagaa
aatgaagcccttggaaaatgtagaagtaaaacttcggaatctcttagtaaacactcttca
aactcttcatcaggtccagtgtcgtcctcttctgccacgcagtccagctctagtgatgta
gattccgacgcgacaccatgcaaaactccgaaacagctgctctgccggccgtcggctggg
aaccgagtagggtctcaagacgtgtccttggagtcctctccggcagttgggaaaatgcag
agcactcaaaccactaacacgtccaacagtaccaacaaaccccagcatggatcagcaagg
ctctttcgttcttccagcaaaggcttccaaggtacaactcaaacaagccctggttccttg
atgacaaacaaacagcatcaaggcaaatccaataatcagtattaccatggcaaaaagagg
aaacacaagagggacgcgcccctctcagacctctgtagatag
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