Tupaia chinensis (Chinese tree shrew): 102488640
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Entry
102488640 CDS
T02978
Symbol
USHBP1
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tup03037
]
102488640 (USHBP1)
Cilium and associated proteins [BR:
tup03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102488640 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
DUF4763
Motif
Other DBs
NCBI-GeneID:
102488640
NCBI-ProteinID:
XP_014442787
LinkDB
All DBs
Position
Un
AA seq
688 aa
AA seq
DB search
MSTRASRPRSRRGRPLPSDVLDTVAETSEEMEVTSGSAKASPLSARGSFSPHPMAEVGGQ
DLEDRPTKEADGDPSETLASAPQETPEPAEAHQAPLQDGETVPPGNGAPDVFQTLQHALS
SLEAAALAWRHQRPPSSPGPLDEADCRREGGPGSPREQEGAGGCEREVARLAEKNAWLRL
ALDSREDELLRTQASLQAIRAEKEALQEQVQELQDSLLRLESLPPPSHSHAGGSGSGSSS
SGADGEPWRTQQVSSLAHSLLQRVRSDVCTHMVGSLPPQPLASDMHIMEAQIEQLRGNIE
KLKCFNRLLLAVLQGYKGRCEGLSMQLSQREAEATALHLALQYSERCEEAYGALLALREA
DAGAGDEASVGSLQAAEKEAWRLLAQEEAAMDRGILQHPQPSPEGSSVDKSTPQEVATQL
QAYVQRLQERRALVKIPPEPGPSLALLCTLPHAEAMIQAILATQPGPALPRLTKMQIQQN
LVATRETLADLXLRLQLLRRKKRGLELREAALRAQGPALALVLEQLQWDRAQLQDAGADS
SGEDSSGGASSGDEEAVQGPPAIPGGTRVTDPEKLAPELAASFSRIQDLRKQLQSLREKL
EQMAQMGRAQRAQSAELNRDLCKAHSALVLAFRGAHRKQEEQQRKLERQVAVMEVQQAKE
LAVLEGRARFLGKPRPLCSPPQLGETIL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgggcctcacggccccgaagccggcgagggagaccccttccatctgatgtt
ctggacaccgtggcagagacctcagaggagatggaggtaaccagcggaagcgccaaagcc
agccctctctcagctcgagggagcttcagcccacaccccatggcggaggtcggtggccag
gacttagaggacaggcccaccaaggaggctgatggagaccccagcgagacactggcgtca
gcgcctcaggagactcccgagcctgcagaagcccaccaggctcccctacaggatggggag
acagtccccccgggaaatggggcccccgatgtgtttcagaccctccagcacgctctcagc
tccctcgaggcagctgctctggcctggcgccatcagcggcccccaagcagtcctgggccg
ctggacgaggctgactgcagacgtgaagggggaccagggtcccccagggagcaggagggg
gccgggggctgcgagagggaggtcgcccgcttggcagagaagaacgcctggttacgactg
gccctggacagccgggaggatgagctgcttcgcacccaggcctccctgcaggccatcagg
gctgagaaggaggcgctgcaggagcaggttcaggagttgcaagattccctgctgaggctg
gagtctctcccacctccctcccacagccatgcgggtggttccggcagtggatccagcagc
tctggggcagacggggagccctggcggactcagcaggtgtcctctctggctcattctctg
ctccagcgtgtacggagtgatgtctgcacccacatggttgggtctctcccaccccagccc
cttgcctctgatatgcacatcatggaagcccagatagagcagctccggggaaacatcgag
aagctgaagtgcttcaaccgactgctgttggctgtgctccagggctacaagggccgctgt
gagggtctcagtatgcagctgagtcagcgcgaggctgaggccacagcactgcacctggcc
ttgcagtacagtgagcgctgtgaggaagcatatggggccctgcttgcgctgcgggaggcc
gacgcgggagctggggacgaagccagcgtgggcagcctgcaggcggctgagaaggaggct
tggaggctgctggcacaagaggaggctgccatggacagagggatactgcagcacccacag
ccaagccctgagggcagcagtgtggacaagtccaccccgcaggaagtggctacccagctc
caagcctacgtccagcgtctacaggagcgccgtgctctggtgaagattcccccggagcct
ggtccctccttggcactcttatgcacgttaccccatgcagaagccatgatccaggccatc
ctggcgacccagcctggtccagccctgcctcggctgacgaagatgcagatccagcagaac
ctggtggccacgcgggagaccctggctgacctnnggctccggctgcagctgctgcggcgg
aagaagcggggcctggagctccgggaggccgccctccgagcccagggtccggccctcgcg
ctggtgctggagcagctgcagtgggaccgggcacaactccaggacgcaggggcggacagc
agtggcgaagacagcagtggaggcgcgagcagcggggacgaggaggcggtgcagggtccc
cctgctattcctggtggcaccagagttacggaccctgaaaaattagctccagaactggct
gcgtccttctcccggatccaggacctgcggaagcagctgcagtctctgcgggagaagctg
gaacagatggctcagatggggcgagcccagagggctcagagtgcagagctgaacagggat
ctgtgcaaggctcacagcgccctggtcctggccttccgaggagcgcaccggaagcaggag
gagcaacagcggaagttggagcggcaggtggctgtcatggaagtccagcaggctaaggag
ctggcagtgctggaaggcagggcgaggttcctggggaagccccggcctctctgttcgcct
ccccagttaggggagaccatcctttag
DBGET
integrated database retrieval system
