KEGG   Tupaia chinensis (Chinese tree shrew): 102488744
Entry
102488744         CDS       T02978                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
  KO
K14308  nuclear pore complex protein Nup54
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013  Nucleocytoplasmic transport
tup05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102488744 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102488744 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102488744 (NUP54)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102488744 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 102488744
NCBI-ProteinID: XP_014441236
LinkDB
Position
Un
AA seq 606 aa
MGLHAPASSVCFHPLYFLNLFGAKSGLVASVKSLADSSNLYLAFFFFLLPPPLFLKILFV
SLPVCLLGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSATPFNFGNSLAS
AGGFGGFGTTTTTAGSAFSFSTPANTGTTGLFGGTQNKGFGFGTAFGTTTGTSTGLGTGL
GTGLGFGGFNTQQQQQTTLGGLFSQPTQAPTQSNQLINTASALSAPTLLGDERDAILAKW
NQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNKDEDGLVVLVFNKKETD
IRSQQQQLVESLHKVLGGIQTLTVNVEGIKTLPDDQTEVVIYVVERSPNGTSRRVPATTL
YAHFEQTNVKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVDPIIWEQAKVDNPDAEK
LIPVPMVGFKELLHRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTMAKIAQYKRKLMD
LSHRTLQVLIKQEIQRKRGYAIQAGEEELRVQLDTIQCELNAPTQFKGRLNELMSQIRMQ
NHFGAVKSEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLEDIKLVEHGLNETIHI
RGGIFT
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgggacttcacgctcctgcgtcttccgtctgtttccaccccctctactttcttaacctc
tttggagcaaagtcaggtttggtcgcgtctgtgaaatctcttgctgattcttctaatctt
tatcttgccttttttttttttcttctccccccccccctttttttgaaaattttgtttgtt
tctttgcctgtatgcctattaggatttggtgggcttgagactgccaactccaccgccagt
gggtttaattttgggggtttcggattaactgctaatcctgcagtgaactttaatattggg
aatttcggtgtatctactacctcggcgactccgttcaattttggtaacagtctggcaagt
gcaggtgggtttggaggatttgggacaacaactactactgcgggttctgcgttcagcttt
tccaccccagctaacacaggcaccactggactctttggtggtactcagaacaaaggtttt
ggatttggtactgcttttggcacaacaacaggaactagtactgggttaggtactggtttg
ggaactggactgggatttggaggatttaacacacagcagcagcagcagactacattaggt
ggtctcttcagccagcctacacaagctcctacccagtccaaccagctgataaatactgca
agtgctctttctgccccaacactactgggagatgagagagatgctattttggcaaaatgg
aatcaactacaggccttttggggaacagggaaaggatatttcaacaataacatcccacct
gtggaattcacacaagaaaatcccttctgccgatttaaggcagtaggctatagctgcatg
cccaataacaaggacgaagatggattagttgttttagttttcaacaaaaaagaaacagat
attcgaagtcagcaacagcagttggtagaatcattgcataaagttttgggaggaatccag
accctcactgtaaatgtagagggtattaaaacattgccagatgaccagacagaagttgtc
atttatgttgttgagcgatctccaaatggtacttcaagaagagttccagctacaacactg
tatgcccattttgaacaaaccaacgtaaaaacacaattgcagcagctcggcgtaactctt
tctatgactagaacagaactttctcctgcgcagatcaaacaacttttacagaatcctcct
gctggtgttgatcctattatctgggaacaagccaaagtggataaccctgatgctgaaaag
ttaattcctgtaccaatggtgggtttcaaagaacttctccatagactgaaggttcaagat
cagatgactaagcagcatcagaccagattagatattatatctgaagatattagtgagcta
caaaagaatcagaccacaactatggccaaaattgcgcaatacaagaggaaactcatggat
ctttcccacagaaccttacaggtcctaatcaaacaggaaattcaaaggaagagaggctat
gccatccaggctggtgaggaggagttgcgggttcagctagatacaattcagtgtgaactg
aatgcacctacccagttcaagggccgactaaatgaactgatgtcccaaatcaggatgcag
aatcattttggagccgtgaaatctgaagaaagatattacatagatgcagatctgttacaa
gaaatcaagcagcatttgaaacaacaacaagaaggccttagtcacttgatcagcattata
aaagacgacctagaagacataaagttggtagagcatggattgaatgagaccatccacatc
agagggggcatctttacttga

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