Tupaia chinensis (Chinese tree shrew): 102488744
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Entry
102488744 CDS
T02978
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102488744 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102488744 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102488744 (NUP54)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102488744 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102488744
NCBI-ProteinID:
XP_014441236
LinkDB
All DBs
Position
Un
AA seq
606 aa
AA seq
DB search
MGLHAPASSVCFHPLYFLNLFGAKSGLVASVKSLADSSNLYLAFFFFLLPPPLFLKILFV
SLPVCLLGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSATPFNFGNSLAS
AGGFGGFGTTTTTAGSAFSFSTPANTGTTGLFGGTQNKGFGFGTAFGTTTGTSTGLGTGL
GTGLGFGGFNTQQQQQTTLGGLFSQPTQAPTQSNQLINTASALSAPTLLGDERDAILAKW
NQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNKDEDGLVVLVFNKKETD
IRSQQQQLVESLHKVLGGIQTLTVNVEGIKTLPDDQTEVVIYVVERSPNGTSRRVPATTL
YAHFEQTNVKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVDPIIWEQAKVDNPDAEK
LIPVPMVGFKELLHRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTMAKIAQYKRKLMD
LSHRTLQVLIKQEIQRKRGYAIQAGEEELRVQLDTIQCELNAPTQFKGRLNELMSQIRMQ
NHFGAVKSEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLEDIKLVEHGLNETIHI
RGGIFT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcacgctcctgcgtcttccgtctgtttccaccccctctactttcttaacctc
tttggagcaaagtcaggtttggtcgcgtctgtgaaatctcttgctgattcttctaatctt
tatcttgccttttttttttttcttctccccccccccctttttttgaaaattttgtttgtt
tctttgcctgtatgcctattaggatttggtgggcttgagactgccaactccaccgccagt
gggtttaattttgggggtttcggattaactgctaatcctgcagtgaactttaatattggg
aatttcggtgtatctactacctcggcgactccgttcaattttggtaacagtctggcaagt
gcaggtgggtttggaggatttgggacaacaactactactgcgggttctgcgttcagcttt
tccaccccagctaacacaggcaccactggactctttggtggtactcagaacaaaggtttt
ggatttggtactgcttttggcacaacaacaggaactagtactgggttaggtactggtttg
ggaactggactgggatttggaggatttaacacacagcagcagcagcagactacattaggt
ggtctcttcagccagcctacacaagctcctacccagtccaaccagctgataaatactgca
agtgctctttctgccccaacactactgggagatgagagagatgctattttggcaaaatgg
aatcaactacaggccttttggggaacagggaaaggatatttcaacaataacatcccacct
gtggaattcacacaagaaaatcccttctgccgatttaaggcagtaggctatagctgcatg
cccaataacaaggacgaagatggattagttgttttagttttcaacaaaaaagaaacagat
attcgaagtcagcaacagcagttggtagaatcattgcataaagttttgggaggaatccag
accctcactgtaaatgtagagggtattaaaacattgccagatgaccagacagaagttgtc
atttatgttgttgagcgatctccaaatggtacttcaagaagagttccagctacaacactg
tatgcccattttgaacaaaccaacgtaaaaacacaattgcagcagctcggcgtaactctt
tctatgactagaacagaactttctcctgcgcagatcaaacaacttttacagaatcctcct
gctggtgttgatcctattatctgggaacaagccaaagtggataaccctgatgctgaaaag
ttaattcctgtaccaatggtgggtttcaaagaacttctccatagactgaaggttcaagat
cagatgactaagcagcatcagaccagattagatattatatctgaagatattagtgagcta
caaaagaatcagaccacaactatggccaaaattgcgcaatacaagaggaaactcatggat
ctttcccacagaaccttacaggtcctaatcaaacaggaaattcaaaggaagagaggctat
gccatccaggctggtgaggaggagttgcgggttcagctagatacaattcagtgtgaactg
aatgcacctacccagttcaagggccgactaaatgaactgatgtcccaaatcaggatgcag
aatcattttggagccgtgaaatctgaagaaagatattacatagatgcagatctgttacaa
gaaatcaagcagcatttgaaacaacaacaagaaggccttagtcacttgatcagcattata
aaagacgacctagaagacataaagttggtagagcatggattgaatgagaccatccacatc
agagggggcatctttacttga
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