Tupaia chinensis (Chinese tree shrew): 102489094 Help Entry 102489094         CDS       T02978                                  Symbol POLR2B Name (RefSeq) RNA polymerase II subunit B   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup03020   RNA polymerase tup03420   Nucleotide excision repair tup05016   Huntington disease Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     102489094 (POLR2B)   09124 Replication and repair    03420 Nucleotide excision repair     102489094 (POLR2B)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     102489094 (POLR2B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tup03021]     102489094 (POLR2B)    03400 DNA repair and recombination proteins [BR:tup03400]     102489094 (POLR2B) Enzymes [BR:tup01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      102489094 (POLR2B) Transcription machinery [BR:tup03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      102489094 (POLR2B) DNA repair and recombination proteins [BR:tup03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       102489094 (POLR2B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF5817 Motif Other DBs NCBI-GeneID:  102489094 NCBI-ProteinID:  XP_006167769 LinkDB All DBs Position Un AA seq 1174 aa AA seqDB search MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQSM RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcactcctgat ttatggcaggaagcatgctggattgtaataagttcctattttgacgagaaaggcttggtc agacaacagctggattcttttgatgagtttattcagatgtctgttcaaaggattgtggaa gatgctcctcctatagacctgcaggctgaagcgcagcatgccagcggagaagttgaagaa ccgccgaggtatttgctgaagtttgaacaaatttacctctccaagcctacccactgggaa cgagatggtgctccttcaccaatgatgccaaatgaagccagattaagaaatctcacgtac tctgctccactttatgttgatataacaaaaacagtcattaaagaaggtgaagaacaactt cagactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcgacttat tgcctattgaatggcttaacagaccgtgatctgtgtgaattaaatgaatgccccttggat cctggtggctacttcattattaatgggtcagaaaaggttctgattgcccaagagaaaatg gcaacaaacacagtctatgtatttgccaaaaaggattccaaatatgcctacacaggagag tgtagatcgtgtctggagaactcttctcgacccaccagtaccatatgggttagcatgctg gcaagaggaggacagggtgcaaaaaagagtgctattggccagcgcattgtggcaactcta ccgtacatcaagcaagaagttcccatcatcattgtgttcagagcactgggttttgtgtct gacagagatatattagaacatattatttatgattttgaagatccagagatgatggaaatg gttaaaccttcccttgatgaagcttttgtcatccaagaacagaacgttgccctgaatttc attggttccagaggggcgaagcctggtgttaccaaagaaaaaagaattaaatacgcaaaa gaagtcttacagaaagaaatgctccctcatgtgggtgtcagtgatttttgtgaaaccaaa aaagcctatttcttagggtatatggttcataggttacttctggcagctttgggtagaaga gaactggatgacagagatcactatggaaacaaaagattggatcttgcggggcctttgctt gcattcttatttagaggaatgtttaagaatttgcttaaagaagtacggatctatgcacag aagtttattgatcgaggaaaagattttaacttggagctggcaattaaaacaaggattata tctgatggcctaaaatactctttagctactggaaactggggtgaccaaaagaaagctcat caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctgtct cacctgcgacgtttaaattctcctattggtagagatggcaagctagcaaaaccgagacag ttgcataacacgctgtggggaatggtgtgtcctgccgagaccccagagggccatgctgtg ggacttgtgaagaatttagccctcatggcttatatttcagttggatctcagccttctcca attctggaatttttagaagaatggagtatggaaaacttagaagaaatttctcccgcagct attgcagatgcaaccaaaatttttgttaatggctgctgggttgggatacataaagatcct gaacagcttatgaacaccctaaggaaactgcgacgccagatggacatcatcgtgtctgaa gtgtctatgatcagagatattcgagagagggagattcggatctacaccgatgccggccgc atttgtagaccacttctgattgtggaaaaacaaaagctgcttctgaagaagaggcacatt gaccaactgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg gtggtggaatatattgacaccctagaagaagaaacagtgatgctcgccatgactccagat gacttacaggagaaagaggtagcttactgctccacatacacacactgcgagatccacccg tccatgatcctcggcgtctgtgcgtccattattccctttcctgaccacaaccagtcccct agaaacacataccagtccgctatgggtaagcaggctatgggagtctatatcaccaacttt catgttcgcatggacacattggcccatgttctctattatcctcaaaaaccacttgtgact acacggtctatggaatatctacgattcagagagctgccagcaggaatcaattcaattgtg gctattgcatcatacactggatacaatcaagaggattctgttatcatgaaccgttctgct gtagaccgaggctttttcaggtccgttttctatcgctcatacaaagaacaggagtcaaag aaaggatttgatcaagaagaggtttttgagaagcctacacgtgaaacatgccagagtatg aggcacgccatttatgacaaactggacgatgatggtttgatagctccaggggttcgtgta tcgggagatgatgttattataggcaaaactgtcaccttgcctgaaaacgaagatgaattg gagagcactaacaggcgctataccaagagggactgcagcactttcctcaggactagcgag acgggcattgtggatcaggtgatggtaactctcaaccaggaaggatacaaattttgtaaa attagggttcgctctgttagaattccacagatcggagacaaatttgctagtcgacatggt cagaaaggtacctgtggtattcagtacagacaagaggatatgcctttcacctgtgaaggc atcacccctgatatcatcatcaatccccacgccatcccctctcggatgacaattggtcac ttgattgaatgtcttcagggcaaggtatcggctaacaagggtgaaattggcgatgccact ccatttaatgatgctgtgaacgtgcagaagatttctaatcttttatctgattatggctac catctcagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacag atttttattggccccacttactaccagcgtttgaagcacatggtggatgataagattcac tctcgtgctagaggacccattcagattctgaacagacagcccatggagggtcggtctcgt gatggtggcctgcgttttggagaaatggaacgagattgtcagattgcccatggagcagct cagtttttaagggaaaggttgtttgaggcatcagatccgtatcaggttcacgtttgcaat ctttgtggaataatggcaattgcgaacaccaggacccacacgtacgagtgcaggggctgt cgcaataaaacccagatttcattggtgcgaatgccgtatgcgtgcaaactgttgttccag gaacttatgtctatgagtattgcacctcgaatgatgagcgtttag

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