KEGG   Tupaia chinensis (Chinese tree shrew): 102489368
Entry
102489368         CDS       T02978                                 
Symbol
DDX6
Name
(RefSeq) DEAD-box helicase 6
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102489368 (DDX6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102489368 (DDX6)
   03036 Chromosome and associated proteins [BR:tup03036]
    102489368 (DDX6)
Enzymes [BR:tup01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102489368 (DDX6)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102489368 (DDX6)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102489368 (DDX6)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    102489368 (DDX6)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 NA-iREase2
Other DBs
NCBI-GeneID: 102489368
NCBI-ProteinID: XP_006152352
LinkDB
Position
Un
AA seq 483 aa
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SVTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcaaaacggtcag
ctgaggggccctgtgaagcccagtggtggtcccggaggagggggcacgcagacacagcaa
cagatgaaccagctgaaaaataccaacacaatcaataacggcactcagcagcaagcacag
agtgtgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacgaaaggaaatgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaatttacgagatgacataatgaggcttgacgatacagtgcatgtggtgatc
gctacccctgggagaatcctggatcttatcaagaaaggagtagcaaaggttgatcatgtc
cagatgatagtgttggatgaggcagataagttgctatcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacaggcaaattttgctatattctgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcagaaaccttatgagattaacctg
atggaggaactaactctgaagggagtaactcagtactacgcatacgtaactgagcgccag
aaagtacactgcctcaacacacttttctccagacttcagataaaccagtcaatcattttc
tgtaattcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtatttcatgatttt
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcggagacctatcttcat
cgtattggaagatcaggtcgttttggtcatcttggcttagccatcaacttgatcacgtat
gatgatcgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaaacctatc
ccgagcaacatcgataagagtctgtatgtggcagagtaccacagcgagccggtagaagat
gagaaaccttaa

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