Tupaia chinensis (Chinese tree shrew): 102490733
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Entry
102490733 CDS
T02978
Symbol
NLRC5
Name
(RefSeq) NLR family CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tup04054
]
102490733 (NLRC5)
Pattern recognition receptors [BR:
tup04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102490733 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atypical_Card
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
nSTAND3
NOD2_WH
AAA_22
AAA_16
AAA
NPHP3_N
NB-ARC
ABC_tran
AAA_25
Motif
Other DBs
NCBI-GeneID:
102490733
NCBI-ProteinID:
XP_006148468
LinkDB
All DBs
Position
Un
AA seq
1873 aa
AA seq
DB search
MDPISLQLGTRNRWGWLVRLLSEDLEWLSAKMKFFLPNMDLGSENETPDPTQRVIFQLSR
LRAQGRATWQSFIHCVCMELEVPLELEVPLLSMWGHEEEFPSLGAGEESQPESQLHHGLK
RPHQSCGSSPRRKQCKQQQLELARRYLQLLRVSAQQHYGGGLPRLGQPLTSHQAYVPPIL
QWSRATVPFDTKKGAAVMGGLKAEDGTDMSIWELFSSRADKGPKVTVILGKAGVGKTTLA
HWLCRKWADGQLERFQALFLFEFRRLNLLTSSMTLSQLLFDVYLSPESGPDAVFQYLKEN
ADRVLLIFDGLDEAIYPCSSGKMAGPNAPGPALALFSGLCHGTLLPGCWVMATSRPGKLP
ACLPTEAAMVHMWGFDGPRVEKYVGVFFHNLPSQEAALAELQASGHLRSLCAVPALCQVT
CFCLRHLLLGTSPGQCAALLPTVTQLYMQMVLALTPPGHPSAVSLLALGEVALKGLEIGK
VIFYAEDIPPSVMAFGATLNLLTSFCVRTGPGHQETGYAFAHLSLQEFFAALHLMTSPQV
NKDMLAHHVTLNSRWVLRTKARLGLSDHLPTFLAGLASCACRPFLRQLAQQEESWVGTKQ
ATVMQVLRKMATHRLTAPKVVELCHCVYETQDPGLADLAAQSLRYHLPFHNFPLTYTDLA
ALTNILKHREAPIHLDFEGCLLEPHCPEALIGCEQIDHLSFKSRKYGDAFAEALSRSLPT
MGSLQKLGLSGSKITARGISHLVQALPLCPQLEEVSFQDNQLKDQEVLSIMEVLPLLPQL
RKLDLSRNNISVSTLLYLAEVAVKYPTVRMLQARESDLIFLLSPPTETAEEPQRTSGQQE
SDSQRKEAPGRSLTLRLRKCELRVHHADALTVLLHKSPHLEEVDFSGNQLEDEGCRVLAE
AMSRLHIARKLDLSDNGLSTSGVHCVLSAVSACPALSELHISLMHKTVIFCFAQEPEEQE
GTRKRLAAFLDNLTPQVPSDLPLSSRRIRLAHCGLQAKHLERLSKALGRSCHLGHLDLSG
NALGDEGVALLTQLLPELGHLQSLTLSENAVSLDAVFSLAKCFSTLRWVFQLDISLESQH
ILLSGDKRSRHGPAAGSLPEFPEGAQSSGLGQRCSSRSFRLGECQLEPPSLTHLCATLED
CPGPLEVQLSCEVLSDQSLETLLHHLHRFPQLSLLQLSQTGLSRRSPFLLADTFGLCPRV
RKVDLRSLQHATLHFSSHEEQDSVCCGRFTSCDLGREHVKTLCQSLSTCKDLKQLDLSSN
QLGDDGLRCLLGCLPQLPISGSLNLSDNGFSQESALDLVETLPCHPRVREASVNLGSKQS
CWIHFSKQEEAGKILRFRECSFRPEQVPSLVIGLSQALQLMELTLSWCCLGLEQLTVLLQ
MVRRPQGLLTLRVEEPWVGRTEVPALLEVCAQASGNVTEISIAKTQQQLCVQLEFPRQEE
NPEAVALRLAHCDLGTHHSLLVRQLMQTCARLRRLSLSQVNLCDDDSASSLLLRSLLLSL
SELKTFRLTSSCMSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTRALMGALTGKYRLK
TLDLSHLPLGESTLATLTDELSHMTLLQRLRLSESRIDDVSCCHLSEALRAATSLEELSL
SHNQIGDAGAQHLAAILPGLPELRKLDLSANGISPAGGVLLAESLTLCRHLEELILACNA
LGDPTALGLARGLPQHLRVLHLQSSRLGPEGAQSLGQALDGCPCVEEISLAANSLAGGVP
QFCKGLPLLRQIDLASCEIDNQTAKLLAASLALCPALEEILLSWNLLGDEAAAELAQVLP
RMHQLKRLDLEKNQITARGAWHLAEGLAQGSHTPVIRLWNNSIPSDMAQCLQRQEPRLDF
AFFDTPPQDPQGT
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggaccccattagcctgcagctgggcaccaggaaccggtggggctggcttgtgagactg
ctcagcgaagacctagaatggctgagcgccaagatgaagttcttcctccccaacatggac
ctgggctccgagaacgagaccccagaccctacccagagggtcatcttccagctgagcaga
ctgcgtgcccaaggccgggccacctggcagtcattcatccactgtgtgtgcatggagctg
gaggtgcctttggaactggaggtgccgctgctgagcatgtggggccacgaagaagagttc
cccagtctgggagcaggcgaagagagccagcctgagtctcagctccaccatggtctcaag
cgtcctcatcagagctgtgggtcctcaccccgccgtaagcagtgcaagcaacagcagcta
gagctggccaggaggtacctgcagctcctgagggtctctgcccagcagcactatggtggt
ggacttcctagattgggacagcccctgacctcccatcaggcctacgtccccccgatcctg
cagtggagccgggccacggtgccctttgacaccaagaagggggctgctgttatgggaggc
ctcaaggcagaagatggcactgacatgagcatctgggaactcttcagctccagggccgac
aagggcccaaaggtgaccgtgatcttggggaaggctggtgtgggcaagaccacactggcc
cactggctctgccggaagtgggctgacggccagctggagcgtttccaggccctgttcctt
tttgaattccgtcggctcaacctgctcaccagttccatgacgctgtcccagctgcttttt
gatgtgtacctgagccccgagtcaggccccgacgctgtcttccagtacctgaaggagaac
gcagatcgcgtcctgcttatcttcgatgggctggatgaagccatctacccctgctccagt
ggaaagatggcaggtcccaacgctccaggtccagctcttgccctcttctctggactctgc
catggcacccttctacccggctgctgggtgatggccacctcccgtcccgggaagctgcct
gcctgcctgcccacggaggcagccatggtccacatgtggggctttgacgggccgcgggtg
gagaagtacgtgggcgtcttcttccacaacctgccatcacaggaggcagccctggcagag
ttgcaggccagtggacacctccgcagcctgtgtgcagtgcctgctctgtgccaagtcacc
tgcttctgcctccgccatctcctcctgggcacctccccaggccagtgtgcagccctcctg
cccaccgtgactcagctctacatgcagatggtgctcgcccttactcccccagggcatccg
tctgctgtgtctctgctggccctgggtgaggtggccctgaagggcctggagatcgggaag
gttatcttctatgctgaagatatccctccatccgtgatggccttcggtgccaccctcaac
ctgctgacctccttctgtgtccgcacaggccctgggcaccaggagacaggctacgctttt
gcccacctcagcctgcaggagttttttgctgccctgcacctgatgaccagtccccaggtg
aacaaagacatgcttgcccaccatgtcaccctcaattcccgctgggtgctacggaccaaa
gctagactgggcctctcggaccacctccccaccttcttggcaggcctggcatcctgtgcc
tgccgtcccttcctcagacaactggcacagcaggaggagagctgggtgggcaccaaacag
gctaccgtcatgcaggtgctgaggaagatggctacccacaggctcacggcaccgaaggtg
gtggagctgtgtcactgtgtgtatgagacacaggatccaggcttggctgacctggctgcc
cagagcctccgctaccacctgcccttccacaatttcccactgacctacactgacctggct
gccttgaccaacatcctgaagcacagggaggcccccatccacctggattttgagggctgc
ctcctggagccccactgtcctgaggctctgataggctgtgagcagatagaccatctcagc
tttaagagccggaagtatggggatgcctttgctgaagccctctccaggagcttgccaaca
atggggagcctgcagaagctggggttatcaggaagtaagatcactgcgcgaggcatcagc
cacctggtgcaggctttgcccctctgtcctcagctggaagaggtcagttttcaggacaac
cagctcaaggaccaggaggtgctgagcatcatggaggtacttcctctcctgccacagctc
cgaaagcttgacctgagccgcaacaacatctccgtgtcaaccctactctacttggcagag
gtggcagtcaagtaccctactgtcaggatgctgcaggccagggagtcagaccttatcttc
cttctctccccacccacggagacagctgaagagccacaaagaacttcaggccaacaagaa
agtgacagccagaggaaagaggctccgggcagaagcctgacactcaggctccggaagtgt
gagctcagggtccaccacgcggatgccctcacagtcctgctccacaaaagcccccacctg
gaggaagtggacttctcagggaaccagctagaagatgaaggctgtcgagtcctggcagaa
gccatgtcccggctgcacatcgccaggaagctggacctcagcgacaacgggctctccacg
tctggggtacactgcgtgctgagcgccgtgagcgcgtgcccagccctgtcggagctgcac
atcagcctaatgcacaagactgtgatcttctgctttgcccaagagccggaggagcaggag
gggacccggaagaggctggctgcatttcttgacaacctcacgccccaggtgccatctgac
ctgcccctgagctccagaaggatcaggttggcccactgtggcctccaagccaagcaccta
gagcggctcagcaaggcgctgggaagaagctgccatctgggtcacctcgacttatcaggc
aatgctctgggcgatgaaggtgtggccctgttgactcagctgctcccagagctaggccat
ctgcagtccttgaccctcagtgagaatgccgtgtccctggatgctgtgtttagtttggcc
aagtgcttttccactctgcggtgggttttccaattggatatcagccttgagagccaacac
atcctcctgagcggtgacaagagaagcagacatggaccagctgctggatctttgccagag
ttcccagagggagcccaatcctcaggactgggtcagcgctgcagctctaggagcttccgc
ctcggggagtgtcagctggagcctcccagcctcacccacctctgtgcgactctggaggac
tgtccagggccactggaagtccagttgtcctgcgaggtcctgagcgaccagagtctggag
accctgctgcaccacttacaccggttcccccagctcagcctgctgcagctgagccagact
ggactgtctcggagaagccccttcctgctggccgacaccttcggcctgtgcccacgggtt
cggaaggtggatctcaggtccctgcagcatgctaccctgcacttcagctctcacgaggag
caggacagcgtgtgctgtggcaggttcacaagctgcgacctcggccgggagcacgtgaag
acgctgtgccagtcactgagcacgtgcaaagacctcaaacagctagacctctcatcaaac
cagctgggagatgacgggctcagatgtctcctggggtgtctgccacagcttcccatctct
ggttcacttaatctgagtgacaatggcttctctcaggaaagtgccctggacctggtggag
acgctgccctgtcatccacgtgtccgggaggcctcagtgaacctgggctctaagcagagc
tgctggatccacttctccaaacaggaggaggctgggaagatactcaggttcagggagtgc
agcttccggcctgagcaagtgcccagtctggtcattggcctgagccaggccctgcaactg
atggagctcacgctaagctggtgctgcctgggcctggagcagctgactgtcctcctgcag
atggtgaggcggccacaagggctgctcactctcagggtagaagaaccgtgggtgggcaga
accgaggtgcctgccctgctagaagtctgtgcccaggcctccggcaacgtcactgagata
agcattgccaagacccagcagcagctttgtgtccagctggaatttcctcgccaggaggag
aacccagaagctgtggctctcaggctggctcactgtgacctggggacccaccacagcctt
cttgtccggcagctgatgcagacgtgtgccaggctgcggcggctcagcttatcccaggtt
aatctctgtgacgatgacagtgccagctccctgctgctgcgaagcctcctgctgtctctc
tcagagctgaagactttccggctgacctccagctgcatgagcaccgagggcctcgcccac
ctcgcctctggtctgggccattgccaccatctggaggagctggacttgtctaacaatcag
ttcgacgaggagggcaccagggcactgatgggggctctgaccgggaagtacaggctaaag
acgctcgacctcagtcaccttccactgggtgagtctacactggccacgctcactgacgaa
ctaagccacatgactctcctgcagcgcctccgactgagtgagagcagaattgatgatgtg
agttgctgtcacctttcagaggctctcagagctgccaccagcttggaggagctgagcttg
agtcacaaccagatcggagatgccggtgcccaacacttggctgccatcctgccggggctg
cctgagctccggaaactagacctctcagcaaatggcatcagcccagctggaggagtgctg
ctggccgagtccctcactctttgcaggcacctggaggagctgatcctcgcctgcaatgcc
ctgggtgatcccacagccctggggctggctcggggtctgccccagcacctgagggtcctg
cacctgcagtccagtcgtctgggcccagagggggcgcagagcctgggccaggccctggat
ggatgcccatgtgtggaagagatcagcttggcagccaacagcctggctggaggggtgcct
caattctgtaaggggctcccgctgctcagacagatcgacctggcttcctgtgagattgac
aaccagactgccaagctcctggccgccagcctcgcgctctgcccagccctagaagaaatc
ttgctgtcctggaatctcctcggggacgaggcggctgctgagctggcccaggtcctgcca
cggatgcaccagctgaagagactcgacctggagaagaaccagatcacagctcgtggggcc
tggcacctggcagaagggttggcacaggggtcacacaccccagtcatccgcctctggaac
aactccatcccctccgacatggcccagtgtctgcaaaggcaggagcccaggctggacttc
gccttcttcgacaccccgccccaggaccctcagggtacttga
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integrated database retrieval system
