Tupaia chinensis (Chinese tree shrew): 102491423
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Entry
102491423 CDS
T02978
Symbol
FREM1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102491423 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tup04091
]
102491423 (FREM1)
Lectins [BR:
tup04091
]
C-Type lectins
Lecticans
102491423 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
MmeI_TRD
Motif
Other DBs
NCBI-GeneID:
102491423
NCBI-ProteinID:
XP_006163896
LinkDB
All DBs
Position
Un
AA seq
2185 aa
AA seq
DB search
MNSLRWAGPGALLLLLLLLLLLLLLPEAGPTFVSVNRGLRVMKGGSAFLSGDDLKFAIPK
EKDACKVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDAVKLRLYRFTE
TDTFSEAFILRVYLLEPDCNIIRMSNNVLEVSEFYGLSRAIDKNLIRFDYERLAGLECTV
RMDPVRTWLPAHGQVVQVEPQPKEPRGDQPHSFFPESQLGTEPKCPGGSCTPGLKKIGSL
KVNCEEFLLMGLRYQHMAPPPPIDYISIRLDLTDSRSKIVYKSESAWLPIYIRAGIPNQI
PRAAFMATFILEVDQFILTSLTTAVLDCEEDETPKPLLVFNITKAPLEGYMTHLLDHTRP
ISSFTWKDLNDMQIAYQPPNSSHLERRHYEVELEVYDFFFEKSAPITVHLSIRAADTNAP
RVSWNTGLTLLEGQSRAITWEQFQIVDNDDIDAVQLVIVDGLQHGRLTLRGGKGFLFTVA
DLQAGVVRYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPKDDSPPFLITNVVIELEE
GQTILIQSSMLRASDMDSSDDYVFFNLTKPPQAGEIMKKPGPGLIGYPVSGFLQRDLFNG
IIYYRHFGGEIFEDSFEFVLWDSHEPPNLSMPQVAIIHITPVNDQLPKEAPGVSRHLVVK
ETEVAYITKKHLHFIDTESYDRELLYTITTPPFFSFSHRYLDAGKLFMVDSIPKLTKTPT
ALGLRSFTQHAVNHMKVAYMPPMQDIGPQLRHVQFTFSISNQHGSTLHGICFNITILPVD
NHIPEVLTSPLKVTEGGQCIITTEHILVSDVDTTLDNIYLYLQGLPPHGRVELNGFPLNT
GGTFSWRDLHTLKVRYQHDGSEVLWDDIPLEVTDGTNSAEFVLHVEVFPVNDEPPVLKAD
LIPTMHCAEGGEVVITSKYIFATDVDSDDLKLMFVIAREPQHGVVRRAGVTVDQFSQGDV
ITGAVTYQHTGGETGLQPCFDTITLVVSDGEAGPFVNGCCYNGPNLSVPGHKSFPTYDLN
ITIHPVDNQPPSIAIGTKFIVDEGFSAALTVNHLSATDPDTATDDLEFVLVSPPQFGYLE
NTLPSVGFEKSNMGISIASFLWKDMKALHINYVQSRHLKIEPTTDQFTLYVTDGKRHSSE
MPFYVLINPTNDEVPDFVVHNITVCEGGMKELDSSIIHAADLDTPKDSLLFRITHRPRHG
LLIAGVSGEDLPQNKQPASPGQKHELVHNFSMELLKTGMRLMYVHDDSESLADDFTIQLS
DGKHKILRTISVEVTPVNDEKPKLSKKAEIAMNMGETRIISSAVLSAIDDDSPREKIYYV
FERLPQNGQLQLKIGRDWLPLHLGMKCTQEDVDLNLLRYTHTGAMDSQNRDSFTFYLWDG
SNRSPAFDCHIVIKDMRKGDIVLLAKPLVVSKGGRGFLTTTTLLAVDGTDKPEELLYVIT
SPPQYGQVEYAIYPGVPITSFSQMDIAGQTVCYVRKSQAAVPSDTFRFIISNGLRTRHGV
LEITLEPVDTALPALTRNKGLRLAKGAMGLLSPDLLQLTDPDTPAENLTFLLAQLPRQGQ
LLLRGMALLQRNFTQQDVDSGNVAYRHWGGDPQPDRFTFVATDRVNQGFVVDGRVWEEPV
SFTIQVDQLDKTAPQITCLHSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIVFKILR
GPQHGRLENTTTGEFIHEKFSQKDLNSKTILYIINPSSEVNSDIMEFQIMDPAGNSGAPQ
ILELKWSHVEWSQSEYEVCENVGVLPLEITRRGYSMDSAFVGIKVNQVSATVGKDFTVTP
SKLIQFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQ
CHPSYSFNQSKHNAWEKGIWHPLPPGSFLPPASGSFHVEKRPLPSSQRLEVTKGDTLQGF
DSKDLSQRRLRTHGNGKVVHPSSVFKNGTDIIYNYHGMVSLKLEDDSSPVHRRKAKVSII
RQPQKILKVAELPQADKVESTTDSHFLRQDQLPSFPKNCTMDLKGLFHFEESIQKLYRCN
GIAWKDWSPQTKEAEEKSCPAGSHRHSGYCHTLVTEQKSTWNAAAQACKRQHLGSLATVF
SRQHMQWLWDVSGRQPFWIGLNDQVHAGHWEWIGGEPVTFTNWRKGPPQRSRPGKNCILV
QRQGRWHTKDCRKGKPHNYVCSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaactccctgcgctgggctgggcccggggccctgctcctgctgctcctgctgctgctc
ctgctcctgctcctgcccgaggccggccccaccttcgtcagcgtgaaccgtggactccga
gtgatgaagggcggctccgccttcctgtcaggagatgacctgaagtttgccatccccaaa
gagaaagatgcctgcaaagtggaagtcgtgatgaatgagccaataacccagagggttggg
aaactcactccacaggtctttgactgccattttcttcccaacgaagtgaagtatattcac
aatggttgcccaattcttgatgaagacgcagtaaagcttagactgtacagatttactgaa
acagacaccttctcggaagcctttatcctgcgggtttatctcctggaaccagactgtaac
atcatccgtatgagtaacaatgtgctagaggtgtctgaattctatggcctgtcccgagcg
attgataagaacctcatcagattcgattatgaaaggctggctggcttggaatgtacagtc
agaatggaccctgtgagaacttggctgccggcccatggccaagtggttcaggtggagcct
cagccaaaagaacctcgtggagatcaaccacacagttttttccctgagtcccaactggga
acagaaccgaagtgtccaggaggaagttgtaccccaggactgaagaagataggcagtctc
aaagtgaactgcgaggagttcctgctgatggggcttcgctatcaacatatggctcccccc
ccacccattgattatatctccatccggctggacctcacagatagcaggagcaaaattgtg
tacaagtcagagagtgcgtggttgcccatctacatcagagctggcattccgaatcagata
cccagggctgcattcatggccacgtttattctggaagtagatcagttcatcctgacctct
ttgactacagcagttctggactgtgaagaggatgagacacccaagcccttgctggtgttc
aacattacaaaagctccactcgagggctacatgactcacctcctagaccacaccagaccc
atctcctccttcacctggaaagacctcaatgacatgcagattgcctaccagcctccaaac
agcagccatctggagaggagacactatgaggtggagctggaggtctacgacttcttcttc
gaaaaaagcgctcctattacggttcacctctccatcagagcagcagacacaaatgccccc
cgagtatcctggaatacaggtctgactctcttggagggacaatctcgagccatcacttgg
gaacagtttcagattgtggacaatgatgacattgatgccgtccagttagtcatcgttgat
ggcctacagcatggtcggcttacattaagagggggaaaaggatttctcttcactgtggct
gaccttcaggctggagttgttcgctatcatcatgacgatagcgactccaccaaagacttt
gtggtcttcagaatattcgatggccttcacagcatccgtcacaagtttcctatcaatatc
ttgcccaaagatgacagtcccccatttctcataaccaatgttgtgattgaactggaggag
ggacagaccatcctgatccagagttcaatgctgcgagcttcagacatggattccagtgat
gactacgtcttcttcaacctcacaaaacccccacaggctggagagatcatgaagaagcca
ggaccaggactgataggctatcctgtctctggcttccttcagagggatctatttaatggg
atcatttactatcgtcactttggtggagaaatctttgaagattcttttgaatttgtcttg
tgggatagccatgaacctccaaacctctcaatgccacaggtggcgataatccatatcact
ccggtcaatgaccagcttccaaaagaggctccaggagtttctcggcatttggttgtcaag
gaaactgaggtggcctacataactaagaaacatctacattttatagatacagaatcatat
gacagggagctgctttacacaattacgacgcctccatttttctccttcagccacagatat
ttggatgctgggaaattgtttatggtggacagcataccaaagctaaccaagactcctacg
gctctggggctgaggtctttcactcagcatgctgtcaaccatatgaaagtggcctacatg
ccgcctatgcaagatatcggcccccagcttcgacacgtccagttcacattttccatcagt
aaccaacatggcagcaccttgcatgggatctgctttaacattacaattctcccagtggac
aaccacattcccgaggtactcaccagccctctgaaggtgactgaaggaggtcagtgcatc
atcaccacagagcacattctggtttccgatgtggataccacactggacaatatctacctc
tacctgcagggactgcctccgcatggaagggtggaactgaacggatttccgctaaacact
ggaggcacattttcttggagagatctccataccttaaaagttaggtatcaacatgatggc
tcggaggttctttgggatgacatacctttggaggtcacagatggcacaaattcagcagaa
tttgttctacacgttgaggtattccctgtaaacgatgagccacccgtcctaaaggctgac
ctcatccccacgatgcattgcgcagagggtggagaggtggtcatcacctccaaatacatt
tttgctactgatgtggacagtgacgatttgaaactgatgtttgtgattgctcgagaacct
cagcatggggtggtgaggagagctggagtcacggtggaccaattctcccagggggatgtt
ataacaggggctgtgacatatcagcacacgggtggcgagactggcctgcagccttgtttt
gacaccattaccttggtggtctcggatggagaagctggcccttttgtcaatggctgttgc
tacaatggacctaatctatctgttcctggtcacaagtcctttccaacctatgatcttaac
atcacaatacatccagtagacaaccaaccaccttcaattgcaataggtaccaagttcatt
gtagatgagggcttctcagcagccctcaccgttaaccatttgtccgccactgaccctgac
acggccacagatgacttggaatttgttttggtttctcctccccagtttggctaccttgaa
aacacacttccctctgtaggttttgaaaaaagcaacatgggcataagtatagcatcattc
ctgtggaaagacatgaaggctttgcacattaactacgtacagtccaggcatctgaaaata
gaaccaaccaccgaccagttcacgctatacgtcacggatgggaagcgacactcctcagag
atgccattttatgttctaatcaaccccacaaatgatgaagttcctgactttgtggtgcac
aatattactgtgtgtgagggtgggatgaaggagctggattcttccatcatccatgctgct
gacctggatacccccaaggattccttgctgttcaggatcacccataggccccgtcatggc
ctcctcatcgccggggtgtcaggtgaagaccttcctcagaataagcagcccgccagtcct
ggacagaagcatgagcttgtgcacaacttttctatggaacttcttaaaaccggaatgagg
ttgatgtatgtgcatgatgactcggagagcctggccgatgactttacaatccagttgtcg
gatgggaaacacaagatacttagaaccatttcagtagaggtcacccccgtcaatgacgag
aagccaaagctgagcaagaaggctgaaattgcaatgaatatgggtgaaacgcgtattatt
tctagtgctgttctttcagccatagatgatgactcacccagggagaagatttactacgta
tttgaaaggcttccccaaaatgggcaacttcagcttaagatagggagggactggctccct
ctccaccttggcatgaaatgcactcaggaggatgtggatctgaacttgctgagatacaca
cacactggggcaatggattcccagaatcgagatagcttcaccttctacctctgggatggc
agcaacagatcacctgcttttgactgtcacatcgtcatcaaggacatgagaaaaggtgat
attgttcttcttgcaaaaccactcgtggtgtcgaaaggcggcaggggtttcttgacgacc
actactctcctggccgtggacggcacagacaagcctgaggaactgctctatgtcatcacc
tccccaccacaatatggccaggtcgaatatgccatctatccgggcgtccccattaccagc
ttcagccaaatggacatagcaggacagacagtctgctacgtacgtaagagccaagcagct
gtccccagtgacacattcagattcatcatcagcaatggactgcgaaccagacacggggtg
ctggagatcacgctggagcctgtggacacggccttgcctgcgttgacccggaacaagggg
ttgaggctggccaaaggggccatgggtctgctgtcccctgacctcctgcagctgacggac
cctgacacacccgcagagaacctcaccttcctcttggcccagctcccacggcagggccag
ctcctcctgcggggcatggcgctgcttcagcgcaacttcactcagcaggatgtggacagc
gggaacgtggcctatcggcactggggaggggacccccagcctgaccgcttcacttttgtg
gccacagacagggtaaaccaaggcttcgtagtggatggaagagtgtgggaagaacctgtt
tcattcactatccaggtggaccagttagacaaaacagccccccagatcacatgcttgcat
tccccttctcaagtggggctgctgaaaaatggctgttacgggatttacatcacttcacgc
gtattgaaggcctcagaccctgacacggaggacgatcagatcgtctttaagattttacga
ggcccacaacatggacgtctggagaacacaacaacaggtgaatttatccatgagaaattt
agccaaaaggacttaaacagtaagaccattctttacatcataaacccatcttcagaagta
aattcagatattatggaatttcaaatcatggacccagccgggaattctggtgctcctcaa
attttggaattgaaatggtctcatgtcgaatggtcacagtctgaatatgaagtctgtgaa
aatgtgggtgtgttgcccttggaaattaccagaaggggatactccatggactcggctttt
gtgggtataaaggtcaatcaagtgtcagccacagttggaaaagatttcaccgtgaccccg
tctaaactgattcagtttgacccaggaatgtcaactaaaatgtggaatatagcaattacc
tatgacggattagaggaagatgatgaggtctttgaagtaattctgaactcccctgtgaat
gcagttcttggcacaaagacaaaagctgcagtgaaaattttggactcaaaaggaggacag
tgccatccttcatattccttcaaccaaagcaagcataacgcatgggagaagggcatttgg
caccctctgcccccagggtctttcttaccccctgcttctgggtcctttcatgtggaaaaa
agaccccttccatcttcccagcggctagaggtcaccaagggagacaccctacagggcttt
gattctaaagatctttctcaaaggaggctgaggacccacgggaatggcaaagtggtccat
ccatcctctgtgtttaaaaatgggacagacatcatctataattatcatgggatggtttcc
ttgaaactggaagatgacagctctccagttcacagaaggaaggccaaagtgtccatcatt
aggcagccacaaaagatactcaaagtggcagaactgcctcaagcagataaggtggaatcc
acaactgactcacacttcctcagacaggaccagttgccctcatttccaaagaactgcact
atggacttaaagggactcttccattttgaagaaagcatccagaagctgtatcgatgcaat
gggattgcctggaaagactggagcccccaaaccaaggaagcagaagaaaaatcctgccca
gctggatcgcaccgtcactcaggctactgtcacaccttggtcacagagcagaaaagcacc
tggaatgcagctgcccaagcttgcaagagacaacacctgggcagccttgcaaccgtgttc
tccaggcagcacatgcagtggctctgggatgtcagtggaagacagcccttttggataggt
ttaaatgaccaagtacatgctggccactgggaatggattggtggtgaacctgttactttt
accaactggagaaaaggaccccctcaacgttcaaggcctggaaagaactgcattttggtt
caaagacaagggagatggcacaccaaggactgtaggaagggcaaacctcacaattacgtg
tgttccaggaaactctaa
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integrated database retrieval system
